Conserved Protein Domain Family
7tmA_OR13-like

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cd15430: 7tmA_OR13-like 
olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320547
Aligned: 14 rows
Threshold Bit Score: 420.238
Created: 12-Dec-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q9NQN1        26 KTFFVLILLMYLVILLGNGVLILVTILDSRlhtPMYFFLGNLSFLDICFTTSSVPLVLDSFltpqETISFsaCAVQMALS 105 human
Q8NGS5        25 IIFFALILVMYVVILIGNGVLIIASILDSRlhmPMYFFLGNLSFLDICYTTSSIPSTLVSLiskkRNISFsgCAVQMFFG 104 human
Q8NGV5        57 LFLFLLCLIMYMIILLGNSLLIIITILDSRlhtPMYFFLGNLSFLDICYTSSSIPPMLIIFmserKSISFigCALQMVVS 136 human
Q8NGT1        54 VVLFVFSLVMYLTTLLGNSTLILITILDSRlktPMYLFLGNLSFMDICYTSASVPTLLVNLlssqKTIIFsgCAVQMYLS 133 human
Q8NGS4        25 VIIFAVCLLMYLITLLGNIFLISITILDSHlhtPMYLFLSNLSFLDIWYSSSALSPMLANFvsgrNTISFsgCATQMYLS 104 human
Q8NGS9        25 LLFFVLIFIMYVVILLGNGTLILISILDPHlhtPMYFFLGNLSFLDICYTTTSIPSTLVSFlserKTISLsgCAVQMFLG 104 human
NP_001000408  25 IALFVLCLGIYCITLLGNAFLVGLIVMDPHlhsPMYFFISNLSLIDICGTSSFTPMMLLNFldvqRTISFpsCALQMYLT 104 Norway rat
Q8NGT2        25 HLLFPLCSAMYLVTLLGNTAIMAVSVLDIHlhtPVYFFLGNLSTLDICYTPTFVPLMLVHLlssrKTISFavCAIQMCLS 104 human
XP_001368031  25 FIFFLLCLIMYIVILLGNSFLITISILDSHlhtPMYFFLSNLSFLDICYTSASVPLLLVNFisgqKNISFvgCGVQMFFS 104 gray short-tail...
XP_003763310  25 IFFFVLCMIIYIVILFGNSVIIILSILDSHlhtPMYFFLSNLSFLDICYTSSFVPKMLVNFlstrKSLSFsgCAAQMSIS 104 Tasmanian devil
Feature 1        #  #                                            # #####                         
Q9NQN1       106 FAMAGTECLLLSMMAFDRYVAICNPlrYSVIMsKAAYMPMAASSWAIGGAASVVHTSlaiqLPFCGDnVINHFtCEILAV 185 human
Q8NGS5       105 FAMGSTECFLLGMMAFDRYVAICNPlrYPIIMnKVVYVLLTSVSWLSGGINSTVQTSlamrWPFCGNnIINHFlCEILAV 184 human
Q8NGV5       137 LGLGSTECVLLAVMAYDHYVAICNPlrYSIIMnGVLYVQMAAWSWIIGCLTSLLQTVltmmLPFCGNnVIDHItCEILAL 216 human
Q8NGT1       134 LAMGSTECVLLAVMAYDRYVAICNPlrYSIIMnRCVCARMATVSWVTGCLTALLETSfalqIPLCGN-LIDHFtCEILAV 212 human
Q8NGS4       105 LAMGSTECVLLPMMAYDRYVAICNPlrYPVIMnRRTCVQIAAGSWMTGCLTAMVEMMsvlpLSLCGNsIINHFtCEILAI 184 human
Q8NGS9       105 LAMGTTECVLLGMMAFDRYVAICNPlrYPIIMsKDAYVPMAAGSWIIGAVNSAVQSVfvvqLPFCRNnIINHFtCEILAV 184 human
NP_001000408 105 LALGTTECLLLVVMAYDRYVAICQPlrYLELMnGQLCTQMAATIWGTGFANSLLHSIlawrLPFCGHhIINHFfCEILAV 184 Norway rat
Q8NGT2       105 LSTGSTECLLLAITAYDRYLAICQPlrYHVLMsHRLCVLLMGAAWVLCLLKSVTEMVismrLPFCGHhVVSHFtCKILAV 184 human
XP_001368031 105 LGLGSTECVLLTVMAYDRYVAICRPlrYPVIMnKGLCGWMAASSWMTGGLNSLIQTIlamrLPFCGNnVIDYLtCEILAV 184 gray short-tail...
XP_003763310 105 FAMGTTECILLAVMAYDRYVAICNPlrYPIVInRTVYVNLAALCWLIGGLDSLFQTIlimqLPFCGEnVIDHFtCEILAV 184 Tasmanian devil
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q9NQN1       186 LKLACadisiNVISMEVTNVIFLGVPVLFISFSYVFIITTIlripsaEGRKKVFSTCSAHLTVVIVFYGTLFFMYGKPks 265 human
Q8NGS5       185 LKLACsdisvNIVTLAVSNIAFLVLPLLVIFFSYMFILYTIlrtnsaTGRHKAFSTCSAHLTVVIIFYGTIFFMYAKPks 264 human
Q8NGV5       217 LKLVCsditiNVLIMTVTNIVSLVILLLLIFISYVFILSSIlrincaEGRKKAFSTCSAHSIVVILFYGSALFMYMKPks 296 human
Q8NGT1       213 LKLACtssllMNTIMLVVSILLLPIPMLLVCISYIFILSTIlritsaEGRNKAFSTCGAHLTVVILYYGAALSMYLKPss 292 human
Q8NGS4       185 LKLVCvdtslVQLIMLVISVLLLPMPMLLICISYAFILASIlrissvEGRSKAFSTCTAHLMVVVLFYGTALSMHLKPsa 264 human
Q8NGS9       185 MKLACadisdNEFIMLVATTLFILTPLLLIIVSYTLIIVSIfkisssEGRSKASSTCSAHLTVVIIFYGTILFMYMKPks 264 human
NP_001000408 185 LKLACgdislNALLLMVATVVLTVTPLLLICLSYIFILTAIlripsaTGRSKAFSTCSAHLTVVVIFYGTISFMYFKPkd 264 Norway rat
Q8NGT2       185 LKLACgntsvSEDFLLAGSILLLPVPLAFICLSYLLILATIlrvpsaARCCKAFSTCLAHLAVVLLFYGTIIFMYLKPks 264 human
XP_001368031 185 WKLACtdiflNKIIMLISNVFFLVIPVVLIFISYSFILFTIlrinsaTGRQKAFSTCSAHLTVVIIFYGSILFMYMKPks 264 gray short-tail...
XP_003763310 185 MHLACidislNELIMLVGAIIVTLIPLLLIIVSYVFILSTIlkirsaEGRNKAFSTCSAHLTVVIIFYGTILFIYMKPks 264 Tasmanian devil
Feature 1                 ## ###  #  ##              
Q9NQN1       266 kdsmgadkEDLSDKLIPLFYGVVTPMLNPIIYSLRN 301 human
Q8NGS5       265 qdllgkdnLQATEGLVSMFYGVVTPMLNPIIYSLRN 300 human
Q8NGV5       297 ------knTNTSDEIIGLSYGVVSPMLNPIIYSLRN 326 human
Q8NGT1       293 ------snAQKIDKIISLLYGVLTPMLNPIIYSLRN 322 human
Q8NGS4       265 ------vdSQEIDKFMALVYAGQTPMLNPIIYSLRN 294 human
Q8NGS9       265 ketlnsddLDATDKIISMFYGVMTPMMNPLIYSLRN 300 human
NP_001000408 265 -------qDPSVGKIITLLYAIVAPSLNAFIYSLRN 293 Norway rat
Q8NGT2       265 ------keAHISDEVFTVLYAMVTTMLNPTIYSLRN 294 human
XP_001368031 265 ------kdSHGTDELIALFYAVVIPMLNPIIYSLRN 294 gray short-tailed opossum
XP_003763310 265 ------kaSLTTDKLITLFYGIFTPMLNPIIYSLRN 294 Tasmanian devil

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