Conserved Protein Domain Family
7tmA_SREB3_GPR173

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cd15217: 7tmA_SREB3_GPR173 
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors
The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320345
Aligned: 5 rows
Threshold Bit Score: 659.718
Created: 28-Mar-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##            ###### 
Q9NS66        23 YVKLVLLGLIMCVSLAGNAILSLLVLKERAlhkaPYYFLLDLCLADGIRSAVCFPFVLASVrhgssWTFSalsCKIVAFM 102 rhesus monkey
Q9I918        37 YVKLVLLGLIICISLVGNLVVSLLVLRDRAlhkaPYYFLLDLCLADTIRSAVCFPFVLVSIkngsaWTYSvlsCKVVAFM 116 zebrafish
XP_002941014  23 HLKLVLLGFIICASLAGNLLVSLLVLKDRSlhkaPYYFLLDLCLADAVRSSACFPFVLLSIrngsaWAYSllsCKVVAFM 102 western clawed ...
XP_008102126  21 YAKLLLLGLIICVSLAGNLSLSLLVLKERGlhkaPYYFLLDLCLADVIRSAVCFPFVLVSIrhgsaWTYSvlsCKIVAFM 100 green anole
XP_006001496  23 YIKLVLLGLIICISLAGNLMISVLVLKDRTlhkaPYYFLLDLCLADTIRSAVCFPFVLVSIkngsaWTYSmlsCKIIAFM 102 coelacanth
Feature 1        ##  #                                            # #####                      # 
Q9NS66       103 AVLFCFHAAFMLFCISVTRYMAIAhhrFYAKRMtlWTCAAVICMAWTLSVAMAFPPVFdvgtykfIREEDQCIFEHRyFK 182 rhesus monkey
Q9I918       117 AVLFCFHAAFMLFCISVTRYMAIAhhrFYSKRMtfWTCVAVVCMVWTLSVAMAFPPVFdvgtykfIREEDQCIFEHRyFK 196 zebrafish
XP_002941014 103 AVLFCFHASFMLFCISVTRYMAIAhhrFYSKRMtlWTCIAVICMVWTLSVAMAFPPVFdvgtykfIREEDQCIFEHRyFK 182 western clawed ...
XP_008102126 101 AVLFCFHAAFLLFCISVTRYMAVAhhrFYAKRMtfWTCIAVICMVWTLSVAMAFPPVFdvgtykfIREEDQCIFEHRyFK 180 green anole
XP_006001496 103 AVLFCFHAAFMLFCISVTRYMAIAhhrFYCKRMtfWTCIAIVCMVWTLSVAMAFPPVFdvgtykfIREEDQCIFEHRyFK 182 coelacanth
Feature 1         ### ### ##                                                                     
Q9NS66       183 ANDTLGFMLMLAVLMAATHAVYGKLLLFeyrhRKMKPVQMVPAISQNWTFHGPGATGQAAANWIAGFGRGPMPPTLLGIR 262 rhesus monkey
Q9I918       197 ANDTLGFMLMLAVLILATHVVYMKLLLFeykhRKMKPVQMVPAISQNWTFHGPGATGQAAANWIAGFGRGPMPPTLLGIR 276 zebrafish
XP_002941014 183 ANDTLGFMLMLAVLIVATHIVYAKLLLFeyrhRKMKPVQMVPAISQNWTFHGPGATGQAAANWIAGFGRGPMPPTLLGIR 262 western clawed ...
XP_008102126 181 ANDTLGFMLMLAVLIFATHVVYIKLLLFeyrhRKMKPVQMVPAISQNWTFHGPGATGQAAANWIAGFGRGPMPPTLLGIR 260 green anole
XP_006001496 183 ANDTLGFMLMLAVLIVATHIVYVKLILFeykhRKMKPVQMVPAISQNWTFHGPGATGQAAANWIAGFGRGPMPPTLLGIR 262 coelacanth
Feature 1                                            #  ## ##  #        ## ###  #  ##            
Q9NS66       263 qnghaaSRRLLGMDEVKGEKQLGRMFYAITLLFLLLWSPYIVACYWRVFvkacavPHRYLATAVWMSFAQAAVNPIVCFL 342 rhesus monkey
Q9I918       277 qnlhnqNRRLLGMEEFKAEKQLGRMFYVITLFFLVLWSPYIVACYWRVFvkactiPHRYLSTTVWMSFAQAGVNPIICFF 356 zebrafish
XP_002941014 263 qnthtaNRRLLGMDEFKSEKRLGRMFYGITLSFLVLWSPYIVACYWRVFvktcsiPHRYLSTAVWMTFTQAGVNPIMCFL 342 western clawed ...
XP_008102126 261 qnahaaNRRLLGMEEFKAEKRLGRMFYVITLLFLVLWSPYIVACYWRVFvkacsiPHRYLSTAVWMSFAQAAVNPIVCFL 340 green anole
XP_006001496 263 qnahtqNRRLLGMEELKVEKRLGRMFYIITLSFLILWSPYIVACYWRVFvkactiPHRYLSTAVWMSFAQAGVNPIICFL 342 coelacanth
Feature 1                 
Q9NS66       343 LNKDLKKCL 351 rhesus monkey
Q9I918       357 LNKDLKKGL 365 zebrafish
XP_002941014 343 LNKDLKSCL 351 western clawed frog
XP_008102126 341 LNKDLKKGL 349 green anole
XP_006001496 343 LNKDLKKCL 351 coelacanth

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