Conserved Protein Domain Family
HBS1_N

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pfam08938: HBS1_N 
HBS1 N-terminus
This domain is found at the N-terminus of HBS1 proteins. It interacts with the ribosomal protein rpS3 at the mRNA entry site.
Statistics
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PSSM-Id: 462642
Aligned: 79 rows
Threshold Bit Score: 51.4339
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q17N55        48 QHSMSaflanNRDIEEEDDDevqaaqpqpenskgllhrrdsecyqlpELNEEDRVRLMSCMDEIRNIVGes----lSDRQ 123 yellow fever mo...
XP_003673285   7 DDYED-----DEGPYEFHDEaef----------------------ddYLNDEEYDLLNQVLPHLKTQMKeyq--gwNNLD 57 
CCD22480       7 DDYDD-----DNGPMDFQDEaef----------------------ddYLNDEEYDLINDVLPTVKKEMAdyq--gwNNLN 57 
XP_003958577   9 DDYMD-----DNEIPEFQDEadf----------------------ddYLNDEEYDLMSQVLPAAKNKLKeeeyvgwNNFD 61 
Q759Q2         8 DDMDT-----QEDPLEFQDEael----------------------ddYLNDEEYDLMNELFPRAKAELSehq--gwDNLA 58  Eremothecium go...
CCE64969       8 DEIDY-----ENETPDFHDEqdl----------------------ddYLNDEEYDLMNDLLPLVRNGMEdfd--gwNNFD 58 
CAR24526       8 DDMDTd---lQDEVPEFRDEaef----------------------ddYLNDEEYQLMSEMFPRAKKELAdyv--gwDNLS 60 
XP_004178231   9 DDLEDf----HDDIPDFQDEqef----------------------ddYLNDEEYDLMSQQFPQAKKALQdyq--gwNNLA 60 
Q6FTI4         7 DDYM------SDELPDFADEaef----------------------ddYLNDEEYDLMNEVLPQAKKELSeyq--gwDNLS 56  [Candida] glabrata
EGW29922       9 LDYPS-----EED-YEFHED---------------------------NLSNEDYEKLHKYLPQLKDIMSey---daDEYD 52 
Q17N55       124 LVEAIMKHNYDFDNALDELLNSSKNTPQQ 152 yellow fever mosquito
XP_003673285  58 LKLALFDNEFESDVAFNQLKKTFKKKKIA 86 
CCD22480      58 LKLALFDHEFDTQAALSHLKKTFKKKKVL 86 
XP_003958577  62 VKLAIFDNDFDLDAALSHLRQSFKKKKVV 90 
Q759Q2        59 VKQAIWDAEFDLEAALVQLKRRYKKKAAK 87  Eremothecium gossypii
CCE64969      59 LKLALFDSDFNTEEALSLLMKDFKKKKTN 87 
CAR24526      61 VKVTIFDHEFNFDEAMIELKRSLKKKKTE 89 
XP_004178231  61 VKLAIFDSDFDLDQALINLKRTYKKKKTP 89 
Q6FTI4        57 VKLAIFENEFDLQAALTELKRKFKKKKPK 85  [Candida] glabrata
EGW29922      53 LKESLYFNYFDVSASVQELKSKFKKSMYN 81 
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