Conserved Protein Domain Family
NOC3

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COG5117: NOC3 
Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]
Statistics
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PSSM-Id: 227447
Aligned: 3 rows
Threshold Bit Score: 627.435
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
19113269  25 SSKRNNSQSSTEPRknatsldskkTTKKgvalpeiAERELTQEDIEFFNEnpsslkylssiNPEDLGKKVekgprpdIYD 104 fission yeast
19173155     --------------------------------------------------------------------------------     Encephalitozoon cun...
6323030    1 MAKRNRSQFRIQER----------TAKK-------RKHEDSLLEGNVFQN-----------APEDMDENT-------IYS 45  baker's yeast
19113269 105 LKKSqqfeldtsrlSSDEEsvldyskdsedEQDYELRPRVSSSWNNESYNRLPIKTKDgllqNVVADVNNGEEFLSESES 184 fission yeast
19173155     --------------------------------------------------------------------------------     Encephalitozoon cun...
6323030   46 AKGS----------SWDEE-----------EQDYEMVPRKNRSDTSNLVEGLPIKVNG----KVERKLHKAQEKPKDDDE 100 baker's yeast
19113269 185 EASLEIDSDIKDEKQKSLEEQKIAPEIP-VKQQIKNDKEALGIQAQQLLEEPVENLHLIRNIFEKFDSPYI-TIKKLSLL 262 fission yeast
19173155   1 ---------------------------------MDSEKSRIASICTKIIENPEKNLGMMEEVFSMITSMAEgKAKGVIYL 47  Encephalitozoon cun...
6323030  101 EDEDSNDSSEDDEGPNEEQEAEAKEDEPdTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNP-NTCKFSML 179 baker's yeast
19113269 263 TLLAVFRDIIPGYKIRPLSEEEQGTKLSKEVAQRWEYEQTLLKHYAKFLQTLETILKSFsSTLDETQLSLYQVAVRCCTK 342 fission yeast
19173155  48 SLLKVFKAIIPLYKVRSLKD---MVKDKRDSLHLKDYDKSLLRWYTSYIKTMVDDVSDE--------S------YISLCE 110 Encephalitozoon cun...
6323030  180 ALVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTP-SNAAPIQVSLGILATQAAKE 258 baker's yeast
19113269 343 LIEQASHFNLSEKLFALAVRQISHK--TKRPGFDGIINSLKNIFEEDNLGKTSLKCVTILSRMFKQRNYDVLPDVYDLFL 420 fission yeast
19173155 111 VLQHFDHFNCTDKVVSGVLRGSLGT----RSVSMLCCDTIKSKLEGDCTG--ELVATVLDQMLDFEYNPLVLEYLLDIPF 184 Encephalitozoon cun...
6323030  259 LISTASHFNFRTDIFTLLLRRICKPriSTDPTSIQIIQTFETLLNEDEEGSISFEILRIFNKILKTRNFNIEESVLNMLL 338 baker's yeast
19113269 421 SVNILN-DMKIKDEAWQDDTTNFKKRKKDLPY----LTKKARKNYKETKKITQEMKEADAVITAQDKEKYQSEILKIIFI 495 fission yeast
19173155 185 VDNSLRsDEEKARKYWEANKPVSRREKKSIFHrkqvFSKKLRKIEKERLRIQSETRDEEDIEERIEEMKNCKKIYDAIQR 264 Encephalitozoon cun...
6323030  339 SLDVLH-DYDPNTKLKG-NVSAPKLKKKDRVH----LSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFT 412 baker's yeast
19113269 496 TYFKTLQLKGK-LIGNALEGVARLSHLLNIEFLGDLLQVLRELVMDDtvflPKDKSGVQATREALLTVSTAFEIASAQGV 574 fission yeast
19173155 265 LYFMVLKGDRYdCYKYVFMGLVKYRKIIRPEFR----EGLYFLLNNN-----LAKISSDARIQGILCIL--------TLY 327 Encephalitozoon cun...
6323030  413 IYLNILKNNAKtLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDT----EFDNLSSAEVRKALLCIVSAFSLISNTQY 488 baker's yeast
19113269 575 GKLNLDLDLglFVQRLYKIIFPFSLNPDADLNLKIKRLKDPD-APSKPFVVNATTEMEMLLKCFQVFFFKSKNISSSRLS 653 fission yeast
19173155 328 GEEGYDFGG--LVDLVYSMVHPMNTEP---------------------------VDNGELIKIVRLLFIKIRQPVHRAHV 378 Encephalitozoon cun...
6323030  489 MKVNVDLSK--FVDGLYALLPYICLDADIELSYRSLRLADPLnNEIIKPSVNVSTKAELLLKALDHVFFRSKSGTKERAT 566 baker's yeast
19113269 654 SFSKRLAIASMQLPEHSASADLALLKKLLSRYSKLSRLLTSEEQIGDGIYNPFIEDPDLSNSSTAVLYEPFLLKNHYSPA 733 fission yeast
19173155 379 ILKRLILYCCSRSTSEFKGLINDISAYYDIEFSDCANPKCREFDQDAANVDSIPSNP---------FFEYFLYKQML--- 446 Encephalitozoon cun...
6323030  567 AFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPEISGLYSSEDRIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPV 646 baker's yeast
19113269 734 VSQSAKELLKSTSL 747 fission yeast
19173155     --------------     Encephalitozoon cuniculi
6323030  647 VTKGLRSLSSRSKE 660 baker's yeast
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