Oryzias melastigma isolate:bigg-433 (ID 556761) - BioProject

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Accession: PRJNA556761 ID: 556761

Oryzias melastigma isolate:bigg-433 (Indian medaka)

Oryzias melastigma isolate:bigg-433 Genome sequencing and assembly

See Genome Information for Oryzias melastigma

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38 additional projects are related by organism.

Oryzias melastigma is becoming a useful fish model for marine and estuarine ecotoxicology studies. A high-quality, complete assembly of marine medaka will enhance its values in the ocean toxicology

Accession	PRJNA556761
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Oryzias melastigma[Taxonomy ID: 30732] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias; Oryzias melastigma
Publications	Liang P et al., "Long-read sequencing and de novo genome assembly of marine medaka (Oryzias melastigma).", BMC Genomics, 2020 Sep 16;21(1):640
Submission	Registration date: 12-Aug-2020 Xiamen University
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	970
WGS master	1
SRA Experiments	8
Protein Sequences	25699
Publications
PubMed	1
PMC	1
Other datasets
BioSample	9
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_014170095.1	Scaffold	WKFB00000000	SAMN12368440	Oryzias melastigma

SRA Data Details

Parameter	Value
Data volume, Gbases	358
Data volume, Tbytes	0.13

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Oryzias melastigma isolate:bigg-433 (Indian medaka)

Oryzias melastigma isolate:bigg-433 Genome sequencing and assembly

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