Taxonomy browser (Chromobacterium violaceum)

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Taxonomy browser (Chromobacterium violaceum)

Chromobacterium violaceum

Taxonomy ID: 536 (for references in articles please use NCBI:txid536)

current name

Chromobacterium violaceum Bergonzini 1880^1),2)

type strain of Chromobacterium violaceum: ATCC :12472, CCUG :213, CIP:103350, DSM :30191, IFO :12614, JCM :1249, BCCM/LMG :1267, NBRC :12614, NCCB:80006, NCTC :9757, NCIMB:9131

NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Chromobacterium janthinum" (Zopf) Ford 1927, effective name³⁾

heterotypic synonym

"Chromobacterium laurentium" (Migula) Leifson 1956, effective name⁴⁾

heterotypic synonym

"Chromobacterium manilae" (Krasil'nikov) Leifson 1956, effective name⁵⁾

heterotypic synonym

Chromobacterium goianiensis

heterotypic synonym

Chromobacterium pseudoviolaceum Kämpfer et al. 2009

type strain of Chromobacterium pseudoviolaceum: ATCC :7461, CCM:2076, BCCM/LMG :3953, NCIMB:8182, NCTC :8683, personal::LW, personal::Lewitus

Lineage( full ): cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	4,492	3,958	35
Protein	139,364	133,821	-
Structure	109	60	-
Genome	1	1	-
Popset	25	25	-
GEO Datasets	19	18	-
PubMed Central	2,703	2,703	-
Gene	18,455	9,132	-
SRA Experiments	155	154	-
Protein Clusters	1,899	1,899	-
Identical Protein Groups	54,725	53,871	-
BioProject	133	130	-
BioSample	182	180	27
Assembly	30	29	-
PubChem BioAssay	99	98	-
Taxonomy	2	1	-

Notes:

1) not "Chromobacterium violaceum" Leifson 1956
2) not "Chromobacterium violaceum" as described by Breed et al. 1957
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

image:Chromobacterium violaceum

Bergonzini C (1880)

Bergonzini, C, "Sopra un nuovo bacterio colorato." Annuar Soc. Nat. Modena, Series 2 (1881) 14:149-158. [No PubMed record available.]

Euzeby JP (1998c)

Euzeby, J.P. "Necessary corrections according to judicial opinions 16, 48 and 52." Int. J. Syst. Bacteriol. (1998) 48:613. (Note: attributions of the genus names Chromobacterium, Aeromonas, and Pediococcus and associated species are corrected.)

Kampfer P et al. (2009j)

Kampfer, P., Busse, H.-J., and Scholz, H.C. "Chromobacterium piscinae sp. nov. and Chromobacterium pseudoviolaceum sp. nov., from environmental samples." Int. J. Syst. Evol. Microbiol. (2009) 59:2486-2490. [Erratum: Int. J. Syst. Evol. Microbiol. (2009) 59:3184.]

Kampfer P et al. (in press_2018g)

Kampfer, P., Glaeser, S.P., and Soby, S.D. "Chromobacterium pseudoviolaceum Kampfer et al. 2009 is a later heterotypic synonym of Chromobacterium violaceum Bergonzini 1880." Int. J. Syst. Evol. Microbiol. (in press)

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Chromobacterium violaceum	meta-databases	BacDive
2 records from this provider	organism-specific	BioCyc
Chromobacterium violaceum Bergonzini 1880 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
9 records from this provider	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Chromobacterium violaceum	culture/stock collections	Global Catalogue of Microorganisms
19 records from this provider	organism-specific	Integrated Microbial Genomes
Chromobacterium violaceum	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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