8CAS: Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)

PDB ID: 8CASDownload
MMDB ID: 230494
PDB Deposition Date: 2023/1/24
Updated in MMDB: 2023/05
Experimental Method:
electron microscopy
Resolution: 3.3  Å
Source Organism:
Similar Structures:
Biological Unit for 8CAS: 50-meric; determined by author
Molecular Components in 8CAS
Label Count Molecule
Proteins (47 molecules)
1
40S Ribosomal Protein S0-a
Molecule annotation
1
40S Ribosomal Protein S1-a
Molecule annotation
1
40S Ribosomal Protein S2
Molecule annotation
1
40S Ribosomal Protein S4-b
Molecule annotation
1
40S Ribosomal Protein S6-b
Molecule annotation
1
40S Ribosomal Protein S8-a
Molecule annotation
1
40S Ribosomal Protein S9-a
Molecule annotation
1
40S Ribosomal Protein S11-a
Molecule annotation
1
40S Ribosomal Protein S13
Molecule annotation
1
40S Ribosomal Protein S14-a
Molecule annotation
1
40S Ribosomal Protein S21-a
Molecule annotation
1
40S Ribosomal Protein S22-a
Molecule annotation
1
40S Ribosomal Protein S23-a
Molecule annotation
1
40S Ribosomal Protein S24-a
Molecule annotation
1
40S Ribosomal Protein S26-a
Molecule annotation
1
40S Ribosomal Protein S27-a
Molecule annotation
1
40S Ribosomal Protein S30-a
Molecule annotation
1
Rps15 Isoform 1
Molecule annotation
1
40S Ribosomal Protein S3
Molecule annotation
1
40S Ribosomal Protein S10-a
Molecule annotation
1
40S Ribosomal Protein S12
Molecule annotation
1
40S Ribosomal Protein S16-a
Molecule annotation
1
40S Ribosomal Protein S17-a
Molecule annotation
1
40S Ribosomal Protein S18-a
Molecule annotation
1
40S Ribosomal Protein S19-a
Molecule annotation
1
40S Ribosomal Protein S20
Molecule annotation
1
40S Ribosomal Protein S25-a
Molecule annotation
1
Rps29a Isoform 1
Molecule annotation
1
40S Ribosomal Protein S31
Molecule annotation
1
Guanine Nucleotide-binding Protein Subunit Beta-like Protein
Molecule annotation
1
40S Ribosomal Protein S28-a
Molecule annotation
1
Eukaryotic Translation Initiation Factor 3 Subunit I
Molecule annotation
1
Eukaryotic Translation Initiation Factor 3 Subunit G
Molecule annotation
1
Tif5 Isoform 1
Molecule annotation
1
Eukaryotic Translation Initiation Factor 3 Subunit a
Molecule annotation
1
Eukaryotic Translation Initiation Factor 3 Subunit B
Molecule annotation
1
Eukaryotic Translation Initiation Factor 3 Subunit C
Molecule annotation
1
Eukaryotic Translation Initiation Factor 4C
Molecule annotation
1
Rli1 Isoform 1
Molecule annotation
1
40S Ribosomal Protein S5
Molecule annotation
1
60S Ribosomal Protein L40-a
Molecule annotation
1
60S Ribosomal Protein L41-a
Molecule annotation
1
Sui2 Isoform 1
Molecule annotation
1
Protein-synthesizing Gtpase
Molecule annotation
1
Sui3 Isoform 1
Molecule annotation
1
OTU Domain-containing Protein 2
Molecule annotation
1
40S Ribosomal Protein S7-a
Molecule annotation
Nucleotides(3 molecules)
1
tRNA
Molecule annotation
1
mRNA
Molecule annotation
1
18S Ribosomal RNA
Molecule annotation
Chemicals and Non-standard biopolymers (15 molecules)
4
1
5
1
2
1
1
* Click molecule labels to explore molecular sequence information.

Citing MMDB