5F0S: Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer and manganese ion

PDB ID: 5F0SDownload
MMDB ID: 137720
PDB Deposition Date: 2015/11/28
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 3  Å
Source Organism:
Similar Structures:
Biological Unit for 5F0S: trimeric; determined by author and by software (PISA)
Molecular Components in 5F0S
Label Count Molecule
Protein (1 molecule)
1
DNA Primase Large Subunit
(Gene symbol: PRIM2)
Molecule annotation
Nucleotides(2 molecules)
1
RNA (5'-r(p*gp*gp*cp*gp*gp*c)-3')
Molecule annotation
1
DNA (5'-d(*gp*cp*cp*gp*cp*cp*ap*ap*cp*ap*tp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
2
1
MANGANESE (II) IONMANGANESE (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303