3KYD: Human SUMO E1~SUMO1-AMP tetrahedral intermediate mimic

PDB ID: 3KYDDownload
MMDB ID: 80170
PDB Deposition Date: 2009/12/5
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 2.61  Å
Source Organism:
Similar Structures:
Biological Unit for 3KYD: trimeric; determined by author and by software (PISA)
Molecular Components in 3KYD
Label Count Molecule
Proteins (3 molecules)
1
Sumo-activating Enzyme Subunit 1
(Gene symbol: SAE1)
Molecule annotation
1
Sumo-activating Enzyme Subunit 2
(Gene symbol: UBA2)
Molecule annotation
1
Small Ubiquitin-related Modifier 1
(Gene symbol: SUMO1)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
2
1
ZINC IONZINC ION
3
1
5'-{[(3-aminopropyl)sulfonyl]amino}-5'-deoxyadenosine5'-{[(3-aminopropyl)sulfonyl]amino}-5'-deoxyadenosine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303