|
Name |
Accession |
Description |
Interval |
E-value |
| JAKMIP_CC3 |
pfam16034 |
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ... |
357-553 |
5.23e-93 |
|
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain] Cd Length: 199 Bit Score: 292.17 E-value: 5.23e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 357 ERDKLLRFRKQRKKMAKLPKP-VVVETFFGYDEEASLESDGSSVSYQTDRTDQTPCTPDDDLEEGMAKEETELRFRQLTM 435
Cdd:pfam16034 1 ERDKLIRARKQRRKEKKKKLRdMVVETFFGYDEEASVDSETSSLSYNTDRTDSTPATPDEDLDEGVAAEEAELRFRQLTR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 436 EYQALQRAYALLQEQVGGTLDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQALYRRNQELVEKIKQM 515
Cdd:pfam16034 81 EYQALQRAYALLQEQSGGTLDAEREAKTREQLQAELRRAQSRIEDLESALAQKGQDSKWVEEKQALIRRNQELVEKIRIM 160
|
170 180 190
....*....|....*....|....*....|....*...
gi 767962582 516 ETEEARLRHEVQDARDQNELLEFRILELEERERKSPAI 553
Cdd:pfam16034 161 EQEEGRLKNEIQDARDQNELLEFRILELEERERRSPAI 198
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
27-759 |
1.81e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 81.26 E-value: 1.81e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 27 DLRAKLTDIQIELQ--QEKSKVSKVEREKNQELRQVREHEQHKTAV-----LLTELKTKLHEEKMKELQAVRETL-LRQH 98
Cdd:TIGR02168 217 ELKAELRELELALLvlRLEELREELEELQEELKEAEEELEELTAELqeleeKLEELRLEVSELEEEIEELQKELYaLANE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 99 EAELLRVIKIKDNENQRLQALLSALRDGGPE-KVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIQ 177
Cdd:TIGR02168 297 ISRLEQQKQILRERLANLERQLEELEAQLEElESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 178 ADKiKAAEIRSVYHLHQEEITRIKKECER-----------------EIRRLEQQLDEKDARRFQLKIAELSAIIRKLEDR 240
Cdd:TIGR02168 377 LEE-QLETLRSKVAQLELQIASLNNEIERlearlerledrrerlqqEIEELLKKLEEAELKELQAELEELEEELEELQEE 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 241 NALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDqSQ 320
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVD-EG 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 321 DEREVDflklqIVEQQNLIDELSKTLETAGYVKSVLERDKLLRfrkqrkkMAKLPKPVVVETFFGYDEEASLESDGSSVS 400
Cdd:TIGR02168 535 YEAAIE-----AALGGRLQAVVVENLNAAKKAIAFLKQNELGR-------VTFLPLDSIKGTEIQGNDREILKNIEGFLG 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 401 YQTDRTDQTP------------CTPDDDLEEGMA-KEETELRFRQLTMEYQALQRAYALLQ---EQVGGTLDAEREVktr 464
Cdd:TIGR02168 603 VAKDLVKFDPklrkalsyllggVLVVDDLDNALElAKKLRPGYRIVTLDGDLVRPGGVITGgsaKTNSSILERRREI--- 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 465 EQLQAEVQRAQARIEDLEKALAE---QGQDMKwiEEKQALYRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRIL 541
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAElrkELEELE--EELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 542 ELEERERK--------SPAISFHHTPFVDGKSPLQVYCEAEGVTDIVVAELMKKLDILGD---NAVSNLTNEEQVVVIQA 610
Cdd:TIGR02168 758 ELEAEIEEleerleeaEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEeaaNLRERLESLERRIAATE 837
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 611 RTVLTLAEKWlQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAMLydalqQEAGAKVA 690
Cdd:TIGR02168 838 RRLEDLEEQI-EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEEL-----RELESKRS 911
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767962582 691 ELlsEEEREKLKVAVEQWKRQvMSELRERDAQILRERMELLQLAQQRIKELEERIEAQ----KRQIKELEEKL 759
Cdd:TIGR02168 912 EL--RRELEELREKLAQLELR-LEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDeeeaRRRLKRLENKI 981
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
26-547 |
1.46e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.97 E-value: 1.46e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 26 EDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHKTAVLLTELKTKLHEEKmKELQAVRETlLRQHEAELLRV 105
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELE-LELEEAQAE-EYELLAELARL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 106 IKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIQADKIKAAE 185
Cdd:COG1196 301 EQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 186 IRSVYHLHQEEITRI--KKECEREIRRLEQQLDEKDARRFQLKIAELSAIIRKLEDRNAL---LSEERNELLKRVREAES 260
Cdd:COG1196 381 LEELAEELLEALRAAaeLAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEeeaLEEAAEEEAELEEEEEA 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 261 QYKPLLDKNKRLSRKNEDLSHALR-RMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLI 339
Cdd:COG1196 461 LLELLAELLEEAALLEAALAELLEeLAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 340 DELSKTLETAGYVKSVLERDKLLRFRKQRK--KMAKLPKPVVVETFFGYDEEASLESDGSSVSYQTDRTDQTPCTPDDDL 417
Cdd:COG1196 541 EAALAAALQNIVVEDDEVAAAAIEYLKAAKagRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 418 EEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQAEVQRAQARIEDLEKALAEQgqdmkwIEE 497
Cdd:COG1196 621 TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEE------ELE 694
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 767962582 498 KQALYRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRILELEERE 547
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEE 744
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
158-759 |
4.02e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.35 E-value: 4.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 158 ISELKGAKRQVEEALTLVIQADKIKAAEIRSVYHLHQEEITRIKK---ECEREIRRLEQQLDEKDARrfqlkIAELSAII 234
Cdd:COG1196 202 LEPLERQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAeleELEAELEELEAELAELEAE-----LEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 235 RKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRP---- 310
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEleea 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 311 -SSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTLETAGYVKSVLERDKLLRFRKQRKKMAKlpkpvvvetffgyDEE 389
Cdd:COG1196 357 eAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE-------------EEL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 390 ASLESDGSSVSYQTDRTDQTpctpddDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQA 469
Cdd:COG1196 424 EELEEALAELEEEEEEEEEA------LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 470 EVQR-AQARIEDLEKALAEQGQDMKWieekQALYRRNQELVEKIKQMETEEARLRHE--VQDARDQNELLEFRILELEER 546
Cdd:COG1196 498 EAEAdYEGFLEGVKAALLLAGLRGLA----GAVAVLIGVEAAYEAALEAALAAALQNivVEDDEVAAAAIEYLKAAKAGR 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 547 ERKSPAISFHHTPFVDGKSPLQVYCEAEgvtdIVVAELMKKLDILGDNAVSNLtneeqVVVIQARTVLTLAEKWLQQIEE 626
Cdd:COG1196 574 ATFLPLDKIRARAALAAALARGAIGAAV----DLVASDLREADARYYVLGDTL-----LGRTLVAARLEAALRRAVTLAG 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 627 TEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAMLYDALQQEAGAKVAELLSEEEREKLKVAVE 706
Cdd:COG1196 645 RLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEE 724
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 767962582 707 QwKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKL 759
Cdd:COG1196 725 A-LEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
423-768 |
7.23e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 7.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 423 KEETELRFRQLTMEYQALQRAYALLQEQVG-GTLDAEREVKTREQLQAEVQRAQARIEDLEKALAE-QGQDMKWIEEKQA 500
Cdd:COG1196 220 EELKELEAELLLLKLRELEAELEELEAELEeLEAELEELEAELAELEAELEELRLELEELELELEEaQAEEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 501 LYRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRILELEERErkspaisfhhtpfvdgksplqvyceaegvtdiv 580
Cdd:COG1196 300 LEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEEL--------------------------------- 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 581 vAELMKKLDilgdnavsnltnEEQVVVIQARTVLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRK 660
Cdd:COG1196 347 -EEAEEELE------------EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 661 QALDQANKHILELEAmlydALQQEAGAKVAELLSEEEREKLKVAVEQwkrqvmsELRERDAQILRERMELLQLAQQRIKE 740
Cdd:COG1196 414 ERLERLEEELEELEE----ALAELEEEEEEEEEALEEAAEEEAELEE-------EEEALLELLAELLEEAALLEAALAEL 482
|
330 340
....*....|....*....|....*...
gi 767962582 741 LEERIEAQKRQIKELEEKLSFSGHSPSW 768
Cdd:COG1196 483 LEELAEAAARLLLLLEAEADYEGFLEGV 510
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
26-547 |
1.44e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.34 E-value: 1.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 26 EDLRAKLTDIQIELQQEKSKVskveREKNQELRQVREHEQHKTAVLLTELKTKLHEEKMKELQAVRETLLRQHEAELLRV 105
Cdd:COG1196 256 EELEAELAELEAELEELRLEL----EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEE 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 106 IKIKDNENQRLQALLSALRdggpekvktvllsEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIQADKIKAAE 185
Cdd:COG1196 332 LEELEEELEELEEELEEAE-------------EELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAEL 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 186 IRSVYHLHQEEITRIKKECEREIRRLEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPL 265
Cdd:COG1196 399 AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 266 LDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLK-LQIVEQQNLIDELSK 344
Cdd:COG1196 479 LAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAaLAAALQNIVVEDDEV 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 345 TLETAGYVKS-VLERDKLLRFRKQRKKMAKLPKPVVVETFFGYDEEASLESDGSSVSYQ-TDRTDQTPCTPDDDLEEGMA 422
Cdd:COG1196 559 AAAAIEYLKAaKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVlGDTLLGRTLVAARLEAALRR 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 423 KEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQALY 502
Cdd:COG1196 639 AVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLE 718
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 767962582 503 RRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRILELEERE 547
Cdd:COG1196 719 EELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLE 763
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
38-798 |
4.54e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.93 E-value: 4.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 38 ELQQEKSKVSKVERE--KNQELRQVREHEQHKTAVLLTELKTKLHEEKMKELQAVRETLlRQHEAELLRVIKIKDNENQR 115
Cdd:TIGR02169 238 QKEAIERQLASLEEEleKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKI-GELEAEIASLERSIAEKERE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 116 LQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKgakrQVEEALTLVIQADKIKAAEIRSVYHLHQE 195
Cdd:TIGR02169 317 LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELK----EELEDLRAELEEVDKEFAETRDELKDYRE 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 196 EITRIKKECEREIRRLEQQLDEKdaRRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRK 275
Cdd:TIGR02169 393 KLEKLKREINELKRELDRLQEEL--QRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 276 NEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTLETAG----- 350
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAgnrln 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 351 --YVKSVLERDKLLRFRKQRK----------KMAKLPKPVVVETFFGYDEEAS--LESD---GSSVSYQTDRTDQTpctp 413
Cdd:TIGR02169 551 nvVVEDDAVAKEAIELLKRRKagratflplnKMRDERRDLSILSEDGVIGFAVdlVEFDpkyEPAFKYVFGDTLVV---- 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 414 dDDLEEGmakEETELRFRQLTMEYQALQRAYALlqeqVGGTLDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMK 493
Cdd:TIGR02169 627 -EDIEAA---RRLMGKYRMVTLEGELFEKSGAM----TGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELR 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 494 WIEekQALYRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRILELEERERKSPAISFHHTPFVDGKSPLQVYCEA 573
Cdd:TIGR02169 699 RIE--NRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHK 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 574 --EGVTDIVVAELMKKLDILGDNAVSNltnEEQVVVIQART-----VLTLAEKWLQQIEETEAALQRKMVDLESEKELfs 646
Cdd:TIGR02169 777 leEALNDLEARLSHSRIPEIQAELSKL---EEEVSRIEARLreieqKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKS-- 851
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 647 kqkgyldeeldyRKQALDQANKHILELEAMLydalqQEAGAKVAELlsEEEREKLKVAVEQWKRQvMSELRERdaqiLRE 726
Cdd:TIGR02169 852 ------------IEKEIENLNGKKEELEEEL-----EELEAALRDL--ESRLGDLKKERDELEAQ-LRELERK----IEE 907
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767962582 727 RMELLQLAQQRIKELEERIEAQKRQIKELEEKLSFSGHSPSWHPDVPHIEsdpfppvgpESRDKMGRRVSIL 798
Cdd:TIGR02169 908 LEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQ---------AELQRVEEEIRAL 970
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
416-760 |
1.14e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.54 E-value: 1.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 416 DLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGgtlDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWI 495
Cdd:COG4717 113 ELREELEKLEKLLQLLPLYQELEALEAELAELPERLE---ELEERLEELRELEEELEELEAELAELQEELEELLEQLSLA 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 496 EEKQA--LYRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRILELEERERKS------PAISFHHTPFVDGKSPL 567
Cdd:COG4717 190 TEEELqdLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKearlllLIAAALLALLGLGGSLL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 568 QVYCEAEGVTDIVVAELMKKLDILGDNAVSNLTNEEQVVVIQARTVLtlaekwlqQIEETEAALQRKMVDLESEKELFSK 647
Cdd:COG4717 270 SLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEEL--------EEEELEELLAALGLPPDLSPEELLE 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 648 QKGYLDEELDYRKQALDQANKHILELEAMLYDALQQEAGAKVAELLSE-----EEREKLKVAVEQWKRQVMSELRER--- 719
Cdd:COG4717 342 LLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAaleqaEEYQELKEELEELEEQLEELLGELeel 421
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 767962582 720 -DAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKLS 760
Cdd:COG4717 422 lEALDEEELEEELEELEEELEELEEELEELREELAELEAELE 463
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
26-523 |
1.55e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.25 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 26 EDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHKTAVLLTELKTKLHEEKMKELQAVRETLLRQHEAELLRV 105
Cdd:COG1196 347 EEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 106 IKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIQADKIKAAE 185
Cdd:COG1196 427 EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGF 506
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 186 IRSVYHLHQEEITRIKKECEREIRRLEQQLDEKDArrfqlkiAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPL 265
Cdd:COG1196 507 LEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALE-------AALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPL 579
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 266 LDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKT 345
Cdd:COG1196 580 DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAG 659
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 346 LETAGYVKSVLERDKLLRFRKQRKKMAKLpkpvvvetffgYDEEASLESDGSSVSYQTDRTDQtpctpDDDLEEGMAKEE 425
Cdd:COG1196 660 GSLTGGSRRELLAALLEAEAELEELAERL-----------AEEELELEEALLAEEEEERELAE-----AEEERLEEELEE 723
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 426 TELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQAEVQRAQARIEDLEK--ALAeqgqdmkwIEEKQALYR 503
Cdd:COG1196 724 EALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPvnLLA--------IEEYEELEE 795
|
490 500
....*....|....*....|
gi 767962582 504 RNQELVEKIKQMETEEARLR 523
Cdd:COG1196 796 RYDFLSEQREDLEEARETLE 815
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
456-758 |
2.05e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.86 E-value: 2.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 456 DAEREVKTR-EQLQAEVQRA------QARIEDLEKALAeqGQDMKWIEEKQALYRRN-QELVEKIKQMETEEARLRHEVQ 527
Cdd:COG1196 193 DILGELERQlEPLERQAEKAeryrelKEELKELEAELL--LLKLRELEAELEELEAElEELEAELEELEAELAELEAELE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 528 DARDQNELLEFRILELEERERkspaisfhhtpfvdgksplqvyceaegvtdivvaelmkkldilgdNAVSNLTNEEQVVV 607
Cdd:COG1196 271 ELRLELEELELELEEAQAEEY---------------------------------------------ELLAELARLEQDIA 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 608 IQARTVLTLAEKwLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAMLYDALQQEAGA 687
Cdd:COG1196 306 RLEERRRELEER-LEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767962582 688 KVAELLSEEEREKLKVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEK 758
Cdd:COG1196 385 AEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE 455
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
27-758 |
4.69e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.91 E-value: 4.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 27 DLRAKLTDIQIELQQEKSKvsKVEREKNQELRQVREHEQHKTAVLLTELKTKLHEEKMKElQAVRETLLRQHEAELLRVI 106
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFG--KAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAE-DARKAEEARKAEDAKRVEI 1156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 107 KIKDNENQRLQALLSAlrdggpEKVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAK--RQVEEALTlviQADKIKAA 184
Cdd:PTZ00121 1157 ARKAEDARKAEEARKA------EDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEeeRKAEEARK---AEDAKKAE 1227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 185 EIRSVYHLHQEEITRIKKECER---EIRRLEQQLDEKDARRFQLKIAE---LSAIIRKLEDRNALLSEERNELLKRVREA 258
Cdd:PTZ00121 1228 AVKKAEEAKKDAEEAKKAEEERnneEIRKFEEARMAHFARRQAAIKAEearKADELKKAEEKKKADEAKKAEEKKKADEA 1307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 259 EsqykplldKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPS--SLNDLDQSQDEREVDflKLQIVEQQ 336
Cdd:PTZ00121 1308 K--------KKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAeaAADEAEAAEEKAEAA--EKKKEEAK 1377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 337 NLIDELSKTLETagyVKSVLERDKllRFRKQRKKMAKLPKPvvvetffgyDEEASLESDGSSVSYQTDRTDQTPCTPDD- 415
Cdd:PTZ00121 1378 KKADAAKKKAEE---KKKADEAKK--KAEEDKKKADELKKA---------AAAKKKADEAKKKAEEKKKADEAKKKAEEa 1443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 416 -DLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQvggtldaeREVKTREQLQAEVQRAQARIEDLEKALAEQ--GQDM 492
Cdd:PTZ00121 1444 kKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKA--------EEAKKADEAKKKAEEAKKKADEAKKAAEAKkkADEA 1515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 493 KWIEEKqalyRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRILE----LEERERKSPaisfhhtpfvDGKSPLQ 568
Cdd:PTZ00121 1516 KKAEEA----KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEekkkAEEAKKAEE----------DKNMALR 1581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 569 VYCEAEGVTDIVVAELMKKLDILGDNAVSNLTNEEQVVvIQARTVLTLAE--KWLQQIEETEAALQRKMVDLESEKELFS 646
Cdd:PTZ00121 1582 KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK-IKAEELKKAEEekKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 647 KQKGYLDEELDYRKQALDQANKhileleamlydalQQEAGAKVAELLSEEEREKLKVavEQWKRQVMSELRERDAQILRE 726
Cdd:PTZ00121 1661 IKAAEEAKKAEEDKKKAEEAKK-------------AEEDEKKAAEALKKEAEEAKKA--EELKKKEAEEKKKAEELKKAE 1725
|
730 740 750
....*....|....*....|....*....|..
gi 767962582 727 RMELLQLAQQRIKELEERIEAQKRQIKELEEK 758
Cdd:PTZ00121 1726 EENKIKAEEAKKEAEEDKKKAEEAKKDEEEKK 1757
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
26-528 |
7.41e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.06 E-value: 7.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 26 EDLRAKLTDIQIELQQEKSKVSKVErEKNQELRQVREHeqhktavllTELKTKLHEEKMKELQAVRETLLRQHE-AELLR 104
Cdd:PRK03918 234 EELKEEIEELEKELESLEGSKRKLE-EKIRELEERIEE---------LKKEIEELEEKVKELKELKEKAEEYIKlSEFYE 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 105 VIKIKDNENQRLQALLSALRDGGPEKVKTVllsEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIQADKIKAA 184
Cdd:PRK03918 304 EYLDELREIEKRLSRLEEEINGIEERIKEL---EEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKR 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 185 E-IRSVYHLHQ--EEITRIKKECEREIRRLEQQLDEKDARRFQLK--IAELSAIIRKLEDRNALLSEE-RNELLKRVREa 258
Cdd:PRK03918 381 LtGLTPEKLEKelEELEKAKEEIEEEISKITARIGELKKEIKELKkaIEELKKAKGKCPVCGRELTEEhRKELLEEYTA- 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 259 esQYKPLLDKNKRLSRKNEDLSHALRRMENKLKfVTQENIEMRQRAGIIR----RPSSLNDLDQSQDEREVDFLKLQIVE 334
Cdd:PRK03918 460 --ELKRIEKELKEIEEKERKLRKELRELEKVLK-KESELIKLKELAEQLKeleeKLKKYNLEELEKKAEEYEKLKEKLIK 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 335 QQNLIDELSKTLETAGYVKSVLeRDKLLRFRKQRKKMAKLPKPVVVETFFGYDEeasLESDGSSVSYQTDRTDQTPCTPD 414
Cdd:PRK03918 537 LKGEIKSLKKELEKLEELKKKL-AELEKKLDELEEELAELLKELEELGFESVEE---LEERLKELEPFYNEYLELKDAEK 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 415 D--DLEEGMAKEETELR--FRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTRE--QLQAEVQRAQARIEDLEKALAEQ 488
Cdd:PRK03918 613 EleREEKELKKLEEELDkaFEELAETEKRLEELRKELEELEKKYSEEEYEELREEylELSRELAGLRAELEELEKRREEI 692
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 767962582 489 GQDMKWIEEKQALYRRNQELVEKIKQMETEEARLRHEVQD 528
Cdd:PRK03918 693 KKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKK 732
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
41-287 |
8.27e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.14 E-value: 8.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 41 QEKSKVS---KVEREKNQELRQVREHEQHKTAVLLTELKTKLHEEKMKELQAvretllRQHEAELLRVIKIKDNENQRLQ 117
Cdd:PTZ00121 1561 EEKKKAEeakKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA------KKAEEAKIKAEELKKAEEEKKK 1634
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 118 alLSALRDGGPEKVKTVllseakEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLviQADKIKAAEIRSVYHLHQEEI 197
Cdd:PTZ00121 1635 --VEQLKKKEAEEKKKA------EELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKA--EEDEKKAAEALKKEAEEAKKA 1704
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 198 TRIKKECEREIRRLEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSE-ERNELLKRVREAESQYKPLLDKNKRLSRKN 276
Cdd:PTZ00121 1705 EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEeEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE 1784
|
250
....*....|.
gi 767962582 277 EDLSHALRRME 287
Cdd:PTZ00121 1785 LDEEDEKRRME 1795
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
73-759 |
1.32e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.28 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 73 TELKTKLHEEKMKELQAVRETLLRQheaelLRVIKIKDNENQRLQALLSALRDggPEKVKTVLLSEAKEEAKKGFEVEKV 152
Cdd:TIGR02168 177 TERKLERTRENLDRLEDILNELERQ-----LKSLERQAEKAERYKELKAELRE--LELALLVLRLEELREELEELQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 153 KMQQEISELKGAKRQVEEALT---LVIQADKIKAAEIRSVYHLHQEEITRIKKECER---EIRRLEQQLDEKDARRFQL- 225
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEelrLEVSELEEEIEELQKELYALANEISRLEQQKQIlreRLANLERQLEELEAQLEELe 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 226 -KIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRA 304
Cdd:TIGR02168 330 sKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARL 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 305 GIIRRpsSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTLETA-GYVKSVLERDKLLRFRKQRKKMAKlpkpvvvetf 383
Cdd:TIGR02168 410 ERLED--RRERLQQEIEELLKKLEEAELKELQAELEELEEELEELqEELERLEEALEELREELEEAEQAL---------- 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 384 fgYDEEASLESDGSSVsyqtdrtdqtpctpdDDLEEGMAKEETELRF-RQLTMEYQALQRAYALLQEQVGGTLDAEREVK 462
Cdd:TIGR02168 478 --DAAERELAQLQARL---------------DSLERLQENLEGFSEGvKALLKNQSGLSGILGVLSELISVDEGYEAAIE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 463 T--REQLQAEVqraqarIEDLEKALAEQGQDMK-------WIEEKQALYRRNQELVEKIKQMETEEARLRHEVQDARDQN 533
Cdd:TIGR02168 541 AalGGRLQAVV------VENLNAAKKAIAFLKQnelgrvtFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 534 ELLEFRIL-------ELEERERKSPAISFHHTPFV-DGK--SPLQVYCEAEGVTDIVVAELMKKLDILgdnavSNLTNEE 603
Cdd:TIGR02168 615 RKALSYLLggvlvvdDLDNALELAKKLRPGYRIVTlDGDlvRPGGVITGGSAKTNSSILERRREIEEL-----EEKIEEL 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 604 QVVVIQARTVLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAMLYDALQQ 683
Cdd:TIGR02168 690 EEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEER 769
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 767962582 684 EAGAKVAELLSEEEREKLKVAVEQWKRQVMSELRERDA--QILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKL 759
Cdd:TIGR02168 770 LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDElrAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQI 847
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1-309 |
1.76e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 1 MSKRGMSSRAKGDKAEALAALQAANEDLR-AKLTDIQIELQQEKSKVSKVEREKNQELR---QVREHEQHKTAVLLTELK 76
Cdd:PTZ00121 1488 AKKKAEEAKKKADEAKKAAEAKKKADEAKkAEEAKKADEAKKAEEAKKADEAKKAEEKKkadELKKAEELKKAEEKKKAE 1567
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 77 TKLHEEKMKELQAVRETLLRQHEAELLRVIKIKDNENQRLQAllSALRDGGPEKVKTVLLSEAkEEAKKGFEVEKVKMQQ 156
Cdd:PTZ00121 1568 EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKA--EEAKKAEEAKIKAEELKKA-EEEKKKVEQLKKKEAE 1644
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 157 EISELKGAKRQVEEaltlviqaDKIKAAEIRSVYHLHQEEITRIKKECEREIRRLEQQLDEKDARRfqlKIAELsaiiRK 236
Cdd:PTZ00121 1645 EKKKAEELKKAEEE--------NKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAK---KAEEL----KK 1709
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767962582 237 LEdrnallsEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRR 309
Cdd:PTZ00121 1710 KE-------AEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRK 1775
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
436-763 |
2.48e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 2.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 436 EYQALQRAyalLQEQVGGTLDAERE--VKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQAlyrrnqELVEKIK 513
Cdd:TIGR02169 212 RYQALLKE---KREYEGYELLKEKEalERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLE------ELNKKIK 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 514 QM-ETEEARLRHEVQDARDQNELLEFRILELEERERKSPAISfhhtpfVDGKSPLQVYCEAEGVTDIVVAELMKKLDILG 592
Cdd:TIGR02169 283 DLgEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERL------AKLEAEIDKLLAEIEELEREIEEERKRRDKLT 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 593 DNavsnltneeqvvVIQARTVLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILE 672
Cdd:TIGR02169 357 EE------------YAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELAD 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 673 LEAMLYDALqqeagAKVAELLSEEEREKLKVAVEQWKRQVMSELRERdaqilrERMELLQLaQQRIKELEERIEAQKRQI 752
Cdd:TIGR02169 425 LNAAIAGIE-----AKINELEEEKEDKALEIKKQEWKLEQLAADLSK------YEQELYDL-KEEYDRVEKELSKLQREL 492
|
330
....*....|.
gi 767962582 753 KELEEKLSFSG 763
Cdd:TIGR02169 493 AEAEAQARASE 503
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
26-264 |
3.26e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 3.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 26 EDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQhktAVLLTELKTKLHEEKMKELQAVretlLRQHEAELLRV 105
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALER---RIAALARRIRALEQELAALEAE----LAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 106 IKIKDNENQRLQALLSAL-RDGGPEKVKTVLLSEAKEEAkkgfevekVKMQQEISELKGAKRQVEEALTLVIQADKIKAA 184
Cdd:COG4942 96 RAELEAQKEELAELLRALyRLGRQPPLALLLSPEDFLDA--------VRRLQYLKYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 185 EIRSvyhlHQEEITRIKKECEREIRRLEQQLDEKdarrfQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKP 264
Cdd:COG4942 168 ELEA----ERAELEALLAELEEERAALEALKAER-----QKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
465-760 |
6.93e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.98 E-value: 6.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 465 EQLQAEVQRAQARIEDLEKALAEQGQDMKWI-------EEKQALYRRNQE-----LVEKIKQMETEEARLRHEVQDARDQ 532
Cdd:TIGR02169 173 EKALEELEEVEENIERLDLIIDEKRQQLERLrrerekaERYQALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 533 NELLEFRILELEERerkspaisfhhtpfvdgksplqvYCEAEgvtdIVVAELMKKLDILGDNAVSNLTNE-EQVVVIQAR 611
Cdd:TIGR02169 253 LEKLTEEISELEKR-----------------------LEEIE----QLLEELNKKIKDLGEEEQLRVKEKiGELEAEIAS 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 612 TVLTLAEKwLQQIEETEAALQRKMVDLESEKElfskQKGYLDEELDYRKQALDQANKHILELEAMlYDALQQEAGAKVAE 691
Cdd:TIGR02169 306 LERSIAEK-ERELEDAEERLAKLEAEIDKLLA----EIEELEREIEEERKRRDKLTEEYAELKEE-LEDLRAELEEVDKE 379
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767962582 692 L-LSEEEREKLKVAVEQWKRQVMSELRERDAQILRER---MELLQL------AQQRIKELEERIEAQKRQIKELEEKLS 760
Cdd:TIGR02169 380 FaETRDELKDYREKLEKLKREINELKRELDRLQEELQrlsEELADLnaaiagIEAKINELEEEKEDKALEIKKQEWKLE 458
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
138-758 |
1.01e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.50 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 138 EAKEEAKKGFEVEKVKMQQEISELKGAKRQV-------EEALTLVIQADKIKAAEIRSVYHLHQEEITRIKKEcEREIRR 210
Cdd:pfam02463 169 RKKKEALKKLIEETENLAELIIDLEELKLQElklkeqaKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDL-LQELLR 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 211 LEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKL 290
Cdd:pfam02463 248 DEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 291 KFVTQENIEMRQRAGIirrPSSLNDLDQSQDEREVDFLKLQIVEQQNLID-ELSKTLETAGYVKSVLERDKLLRFRKQRK 369
Cdd:pfam02463 328 KELKKEKEEIEELEKE---LKELEIKREAEEEEEEELEKLQEKLEQLEEElLAKKKLESERLSSAAKLKEEELELKSEEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 370 KMAKLPKPVVVETFFGYDEEASLESDGSSVSYQTDRTDQtpctpdddLEEGMAKEETELRFRQLTMEYQALQRAYALLQE 449
Cdd:pfam02463 405 KEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQ--------GKLTEEKEELEKQELKLLKDELELKKSEDLLKE 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 450 QVGGTLDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQALYRrnQELVEKIKQMETEEARLRHEVQDA 529
Cdd:pfam02463 477 TQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGR--LGDLGVAVENYKVAISTAVIVEVS 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 530 RDQNELLEFRILELEERERKSPAISFHHTPFVDGKSPLQVYCEAEGVTDIVVAELMKKLDILGDNAVSNLTNEEQVVVIQ 609
Cdd:pfam02463 555 ATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTEL 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 610 ARTVLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKhilELEAMLYDALQQEAGAKV 689
Cdd:pfam02463 635 TKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEE---ILRRQLEIKKKEQREKEE 711
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767962582 690 AELLSEEEREKLKVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEK 758
Cdd:pfam02463 712 LKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEER 780
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
136-347 |
1.55e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.83 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 136 LSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEAltlvIQADKIKAAEIRSVYHLHQEEITRIKKECEREIRRLEQ-- 213
Cdd:TIGR02169 203 LRREREKAERYQALLKEKREYEGYELLKEKEALERQ----KEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEEln 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 214 ----QLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENK 289
Cdd:TIGR02169 279 kkikDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEE 358
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 767962582 290 LKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTLE 347
Cdd:TIGR02169 359 YAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
153-548 |
1.81e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.14 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 153 KMQQEISELKGAKRQVEEALTLVIQADKIKA--AEIRSVYHLHQEEITRIKKECE-----REIRRLEQQLDEKDAR--RF 223
Cdd:COG4717 72 ELKELEEELKEAEEKEEEYAELQEELEELEEelEELEAELEELREELEKLEKLLQllplyQELEALEAELAELPERleEL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 224 QLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLdknKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQR 303
Cdd:COG4717 152 EERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEEL---QDLAEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 304 AGIIRRPSSLNDLDQSQDEREVDFLKLQIVE--QQNLIDELSKTLETAGYVKSVLERDKLLRFRKQRKKMAKLPKPVVVE 381
Cdd:COG4717 229 LEQLENELEAAALEERLKEARLLLLIAAALLalLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 382 TFFGYD--EEASLESDGSSVSYQTDRTDQTPCTPDDDLEEgMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAE- 458
Cdd:COG4717 309 ALPALEelEEEELEELLAALGLPPDLSPEELLELLDRIEE-LQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEEl 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 459 ----REVKTREQLQAEVQRAQARIEDLEK---ALAEQGQDMKWIEEKQALYRRNQELVEKIKQMETEEARLRHEVQDARD 531
Cdd:COG4717 388 raalEQAEEYQELKEELEELEEQLEELLGeleELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEE 467
|
410
....*....|....*..
gi 767962582 532 QNELLEFRILELEERER 548
Cdd:COG4717 468 DGELAELLQELEELKAE 484
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
25-309 |
2.62e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 45.04 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 25 NEDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHKTAVLLTELKTKLHEEKMKELQAVRETlLRQHEAELLR 104
Cdd:TIGR01612 691 NTEDKAKLDDLKSKIDKEYDKIQNMETATVELHLSNIENKKNELLDIIVEIKKHIHGEINKDLNKILED-FKNKEKELSN 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 105 VIKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAK-EEAKKGFE----------VEKVKMQQEISELKGAKRQVEEALT 173
Cdd:TIGR01612 770 KINDYAKEKDELNKYKSKISEIKNHYNDQINIDNIKdEDAKQNYDkskeyiktisIKEDEIFKIINEMKFMKDDFLNKVD 849
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 174 LVIQADKIKAAEIRSVYHLHQEEITRIKKECEREirrleqqldekdarrfQLKIAElsaiiRKLEDRNALLSEERNELLK 253
Cdd:TIGR01612 850 KFINFENNCKEKIDSEHEQFAELTNKIKAEISDD----------------KLNDYE-----KKFNDSKSLINEINKSIEE 908
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 767962582 254 RVREAESQYKplLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRR 309
Cdd:TIGR01612 909 EYQNINTLKK--VDEYIKICENTKESIEKFHNKQNILKEILNKNIDTIKESNLIEK 962
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
25-537 |
3.06e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.54 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 25 NEDLRAKLTDIQIELQQEKskvskvereknQELRQVREHEQHKTAVLLTELKTKlhEEKMKELQAVRETLLRQHEAELLR 104
Cdd:COG1196 307 LEERRRELEERLEELEEEL-----------AELEEELEELEEELEELEEELEEA--EEELEEAEAELAEAEEALLEAEAE 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 105 VIKIKDNENQRLQALLSALRdggpEKVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIQADKIKAA 184
Cdd:COG1196 374 LAEAEEELEELAEELLEALR----AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAE 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 185 EIRSVYHLHQEEITRIKKEcEREIRRLEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKP 264
Cdd:COG1196 450 EEAELEEEEEALLELLAEL-LEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAV 528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 265 LLDKNKRLSRKNED-LSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELS 343
Cdd:COG1196 529 LIGVEAAYEAALEAaLAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDL 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 344 KTLETAGYVKSVLERDKLLRFRkqRKKMAKlpkpVVVETFFGYDEEASLESDGSSvsyqtdrtdqtpctPDDDLEEGMAK 423
Cdd:COG1196 609 READARYYVLGDTLLGRTLVAA--RLEAAL----RRAVTLAGRLREVTLEGEGGS--------------AGGSLTGGSRR 668
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 424 EETELRFRQLTMEYQALQRAYALLQEQVggTLDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQALYR 503
Cdd:COG1196 669 ELLAALLEAEAELEELAERLAEEELELE--EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEE 746
|
490 500 510
....*....|....*....|....*....|....
gi 767962582 504 RNQELVEKIKQMETEEARLRHEVQDARDQNELLE 537
Cdd:COG1196 747 LLEEEALEELPEPPDLEELERELERLEREIEALG 780
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
60-548 |
3.27e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 3.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 60 VREH--EQHKTAVLLTELKtklheEKMKELQAVRETLLRQHE-AELLRVIKIKDNENQRLQALLSALRDggpekVKTVLL 136
Cdd:COG4913 213 VREYmlEEPDTFEAADALV-----EHFDDLERAHEALEDAREqIELLEPIRELAERYAAARERLAELEY-----LRAALR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 137 SEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLViqadkikAAEIRSVYHLHQEEITRIKKECEREIRRLEQQLD 216
Cdd:COG4913 283 LWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL-------REELDELEAQIRGNGGDRLEQLEREIERLERELE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 217 EKDARR--------------------FQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRKN 276
Cdd:COG4913 356 ERERRRarleallaalglplpasaeeFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRK 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 277 -----------EDLSHALRRMENKLKFVTqENIEMR----------------QRAGIIRRPSSLND----LDQSQDEREV 325
Cdd:COG4913 436 sniparllalrDALAEALGLDEAELPFVG-ELIEVRpeeerwrgaiervlggFALTLLVPPEHYAAalrwVNRLHLRGRL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 326 DFLKLQI---------VEQQNLIDELS-KTLETAGYVKSVLER----------DKLLRFRK------QRKKMAKL----- 374
Cdd:COG4913 515 VYERVRTglpdperprLDPDSLAGKLDfKPHPFRAWLEAELGRrfdyvcvdspEELRRHPRaitragQVKGNGTRhekdd 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 375 PKPVVVETFFGYDEEASLEsdgssvsyqtdrtdqtpctpddDLEEGMAKEETELrfRQLTMEYQALQRAYALLQEQvggt 454
Cdd:COG4913 595 RRRIRSRYVLGFDNRAKLA----------------------ALEAELAELEEEL--AEAEERLEALEAELDALQER---- 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 455 LDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWI----EEKQALYRRNQELVEKIKQMETEEARLRHEVQDAR 530
Cdd:COG4913 647 REALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLaaleEQLEELEAELEELEEELDELKGEIGRLEKELEQAE 726
|
570
....*....|....*...
gi 767962582 531 DQNELLEFRILELEERER 548
Cdd:COG4913 727 EELDELQDRLEAAEDLAR 744
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
622-758 |
4.16e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 4.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 622 QQIEETEAALQR-----KMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAML-----------YDALQQEA 685
Cdd:COG3206 189 KELEEAEAALEEfrqknGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLgsgpdalpellQSPVIQQL 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 686 GAKVAELLSEEEREKLK--------VAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEE 757
Cdd:COG3206 269 RAQLAELEAELAELSARytpnhpdvIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPE 348
|
.
gi 767962582 758 K 758
Cdd:COG3206 349 L 349
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
165-760 |
4.52e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.28 E-value: 4.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 165 KRQVEEALTLVIQADKIKAAEIR-SVYHLHQ-----EEITRIKKECEREIRRLEQQLDEKDArrfqlKIAELSAIIRKLE 238
Cdd:TIGR02168 206 ERQAEKAERYKELKAELRELELAlLVLRLEElreelEELQEELKEAEEELEELTAELQELEE-----KLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 239 DRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKfvtqeniemrqragiirrpsslndldq 318
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD--------------------------- 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 319 sQDEREVDFLKLQIVEQQNLIDELSKTLETAGYVKSVLER---DKLLRFRKQRKKMAKLPKPVVVETffgyDEEASLESD 395
Cdd:TIGR02168 334 -ELAEELAELEEKLEELKEELESLEAELEELEAELEELESrleELEEQLETLRSKVAQLELQIASLN----NEIERLEAR 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 396 GSSVSYQTDRTDQTPCTPDDDLEEGmAKEETELRFRQLTMEYQALQRAYALLQEQVGgTLDAEREVKTREQLQA--EVQR 473
Cdd:TIGR02168 409 LERLEDRRERLQQEIEELLKKLEEA-ELKELQAELEELEEELEELQEELERLEEALE-ELREELEEAEQALDAAerELAQ 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 474 AQARIEDLEKALAEQ---GQDMKWIEEKQ----ALYRRNQELVEKIKQMETE-EARLRHEVQDARDQNELLEFRILELEE 545
Cdd:TIGR02168 487 LQARLDSLERLQENLegfSEGVKALLKNQsglsGILGVLSELISVDEGYEAAiEAALGGRLQAVVVENLNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 546 RERKSPA------ISFHHTPFVDGKSPLQVYCEAEGVTDIVV---AELMKKLD-ILGD----------NAVSNLTNEEQV 605
Cdd:TIGR02168 567 QNELGRVtflpldSIKGTEIQGNDREILKNIEGFLGVAKDLVkfdPKLRKALSyLLGGvlvvddldnaLELAKKLRPGYR 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 606 VVIQARTVLTL-------AEKWLQQIEETEAA---LQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEA 675
Cdd:TIGR02168 647 IVTLDGDLVRPggvitggSAKTNSSILERRREieeLEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSR 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 676 MLYDALQQ--EAGAKVAELLSEEEREKLKVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIK 753
Cdd:TIGR02168 727 QISALRKDlaRLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD 806
|
....*..
gi 767962582 754 ELEEKLS 760
Cdd:TIGR02168 807 ELRAELT 813
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
26-383 |
5.13e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.90 E-value: 5.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 26 EDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHKTAVLLTELKTKLHEEKMKELQAVRETLLRQHEAELLRV 105
Cdd:TIGR02169 677 QRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENV 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 106 I-KIKDNEN--QRLQALLSALRdggpEKVKTVLLSEAKEEAKKgFEVEKVKMQQEISELKGAKRQVEEALTLVIQADKIK 182
Cdd:TIGR02169 757 KsELKELEAriEELEEDLHKLE----EALNDLEARLSHSRIPE-IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYL 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 183 AAEIrsvyhlhqEEITRIKKECEREIRRLEQQLDE--KDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAES 260
Cdd:TIGR02169 832 EKEI--------QELQEQRIDLKEQIKSIEKEIENlnGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 261 QYkplldknKRLSRKNEDLSHALRRMENKLKFVTQENIEM-RQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNL- 338
Cdd:TIGR02169 904 KI-------EELEAQIEKKRKRLSELKAKLEALEEELSEIeDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMl 976
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 767962582 339 -IDELSKTLETAGYVKSvlERDKLLRFRKQRK----KMAKLPKPVVVETF 383
Cdd:TIGR02169 977 aIQEYEEVLKRLDELKE--KRAKLEEERKAILerieEYEKKKREVFMEAF 1024
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
462-704 |
5.18e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 5.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 462 KTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEK-QALYRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRI 540
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQlAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 541 LELEERERKSPAISFHHtpfvDGKSPLQVYCEAEGVTDivvaelmkkldilgdnAVSNLTNEEQVVVIQARTVLTLAEKw 620
Cdd:COG4942 100 EAQKEELAELLRALYRL----GRQPPLALLLSPEDFLD----------------AVRRLQYLKYLAPARREQAEELRAD- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 621 LQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAMLYDALQQEA--GAKVAELLSEEER 698
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEelEALIARLEAEAAA 238
|
....*.
gi 767962582 699 EKLKVA 704
Cdd:COG4942 239 AAERTP 244
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
27-544 |
6.26e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.57 E-value: 6.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 27 DLRAKLTDIQIELQQEK----SKVSKVERE---KNQELRQVR------EHEQHKTAVLLTELKTKLHEEKmKELQAVRET 93
Cdd:pfam15921 321 DLESTVSQLRSELREAKrmyeDKIEELEKQlvlANSELTEARterdqfSQESGNLDDQLQKLLADLHKRE-KELSLEKEQ 399
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 94 LLRQHEAE---------LLRVIKIKDNENQRLQALLSALRdggpekvktvllSEAKEEakkgfevekvkMQQEISELKGA 164
Cdd:pfam15921 400 NKRLWDRDtgnsitidhLRRELDDRNMEVQRLEALLKAMK------------SECQGQ-----------MERQMAAIQGK 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 165 KRQVEEALTLVIQADKIKAAEIRSVYHLHQEEITRikKECEREIRRLEQQLDEKDarrfqlkiaelsaiiRKLEDRNALL 244
Cdd:pfam15921 457 NESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTL--ESSERTVSDLTASLQEKE---------------RAIEATNAEI 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 245 SEERNELLKRVREAEsQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDERE 324
Cdd:pfam15921 520 TKLRSRVDLKLQELQ-HLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKE 598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 325 VDFLKLQIVEQQNLIDEL-SKTLETAGYVKSV-LERDKLLRFRKQRKKMAKlpkpvvvetffgydeEASLESDGSSVSYQ 402
Cdd:pfam15921 599 INDRRLELQEFKILKDKKdAKIRELEARVSDLeLEKVKLVNAGSERLRAVK---------------DIKQERDQLLNEVK 663
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 403 TDRTDQTPCTPDDDLEEGMAK---EETELRFRQLTMEYQALQRAYallqEQVGGTLDA---------EREVKTREQLQA- 469
Cdd:pfam15921 664 TSRNELNSLSEDYEVLKRNFRnksEEMETTTNKLKMQLKSAQSEL----EQTRNTLKSmegsdghamKVAMGMQKQITAk 739
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767962582 470 --EVQRAQARIEDLEKALAEQGQdmkwieEKQALYRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRILELE 544
Cdd:pfam15921 740 rgQIDALQSKIQFLEEAMTNANK------EKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANME 810
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
3-531 |
6.60e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 6.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 3 KRGMSSRAKGDKAEALAALQAANEDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHKTAVLLTELKTKLHEE 82
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAA 1369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 83 KMKELQAVRETLLRQHEAELLRVIKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEV-EKVKMQQEISEL 161
Cdd:PTZ00121 1370 EKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAkKKAEEAKKADEA 1449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 162 KGAKRQVEEALTLVIQADKIKAAEirsvyhlhqeeitRIKKECErEIRRLEQQldEKDARRFQLKIAELSAIIRKLEDRN 241
Cdd:PTZ00121 1450 KKKAEEAKKAEEAKKKAEEAKKAD-------------EAKKKAE-EAKKADEA--KKKAEEAKKKADEAKKAAEAKKKAD 1513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 242 ALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHA--LRRMENKLKfVTQENIEMRQRAGIIRRPSslnDLDQS 319
Cdd:PTZ00121 1514 EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAeeLKKAEEKKK-AEEAKKAEEDKNMALRKAE---EAKKA 1589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 320 QDEREVDFLKLQIVEQQNLIDELSKTLEtagyvksvlERDKLLRFRKQ---RKKMAKLPKPVVVETffGYDEEASLESDG 396
Cdd:PTZ00121 1590 EEARIEEVMKLYEEEKKMKAEEAKKAEE---------AKIKAEELKKAeeeKKKVEQLKKKEAEEK--KKAEELKKAEEE 1658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 397 SSVSYQTDRTDQtpcTPDDDLEEGMAKEETELRFRQLTMEYQALQRAYAllqEQVggTLDAEREVKTREQLQAEVQRAQA 476
Cdd:PTZ00121 1659 NKIKAAEEAKKA---EEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKA---EEL--KKKEAEEKKKAEELKKAEEENKI 1730
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 767962582 477 RIEDLEKalaEQGQDMKWIEEkqalYRRNQELVEKIKQMETEEARLRHEVQDARD 531
Cdd:PTZ00121 1731 KAEEAKK---EAEEDKKKAEE----AKKDEEEKKKIAHLKKEEEKKAEEIRKEKE 1778
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
28-742 |
6.99e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.57 E-value: 6.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 28 LRAKLTDIQI---ELQQEKSKVSKVEREKNQELRQVReheqhktavllTELKTKLHEekMKELQAVRETLLRQHEAELLR 104
Cdd:pfam15921 108 LRQSVIDLQTklqEMQMERDAMADIRRRESQSQEDLR-----------NQLQNTVHE--LEAAKCLKEDMLEDSNTQIEQ 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 105 VIKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEA---KKGFEVEKV--KMQQEISELKGAKRQVEEALTLVIQAD 179
Cdd:pfam15921 175 LRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMhfrSLGSAISKIlrELDTEISYLKGRIFPVEDQLEALKSES 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 180 KIKaaeIRSVYHLHQEEITRIKKECEREIRRLEQQL----DEKDARRFQLKIAELSA------IIRKLEDRNALLSEERN 249
Cdd:pfam15921 255 QNK---IELLLQQHQDRIEQLISEHEVEITGLTEKAssarSQANSIQSQLEIIQEQArnqnsmYMRQLSDLESTVSQLRS 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 250 ELlkrvREAESQYKPLLDK-NKRLSRKNEDLSHAlrRMENKLKFVTQENIE---MRQRAGIIRRPSSLNdLDQSQDEREV 325
Cdd:pfam15921 332 EL----REAKRMYEDKIEElEKQLVLANSELTEA--RTERDQFSQESGNLDdqlQKLLADLHKREKELS-LEKEQNKRLW 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 326 DflklQIVEQQNLIDELSKTLETAGyvksvLERDKLLRFRKQRKKMAKLPKPVVVETFFGYDEeaSLESdGSSVSYQTDR 405
Cdd:pfam15921 405 D----RDTGNSITIDHLRRELDDRN-----MEVQRLEALLKAMKSECQGQMERQMAAIQGKNE--SLEK-VSSLTAQLES 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 406 TDQTPCTPDDDL-EEGMAKEETELRFRQLTMEYQALQRAYAL-------LQEQVGGTLDAEREVKTREQlqaEVQRAQAR 477
Cdd:pfam15921 473 TKEMLRKVVEELtAKKMTLESSERTVSDLTASLQEKERAIEAtnaeitkLRSRVDLKLQELQHLKNEGD---HLRNVQTE 549
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 478 IEDLEKALAEQGqdmKWIEEKQALYRRNQELV----EKIKQMETEEARLRHEVQDARdqNELLEFRIL------ELEERE 547
Cdd:pfam15921 550 CEALKLQMAEKD---KVIEILRQQIENMTQLVgqhgRTAGAMQVEKAQLEKEINDRR--LELQEFKILkdkkdaKIRELE 624
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 548 RKSPAISFHHTPFVD-GKSPLQVYCEAEGVTDIVVAE----------LMKKLDILGDNaVSNLTNEEQVVVIQARTVLTL 616
Cdd:pfam15921 625 ARVSDLELEKVKLVNaGSERLRAVKDIKQERDQLLNEvktsrnelnsLSEDYEVLKRN-FRNKSEEMETTTNKLKMQLKS 703
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 617 AEKWLQQIEETEAALQRK-----MVDLESEKELFSK--QKGYLDEELDYRKQALDQAN--KHILELEAmlyDALQQEAGA 687
Cdd:pfam15921 704 AQSELEQTRNTLKSMEGSdghamKVAMGMQKQITAKrgQIDALQSKIQFLEEAMTNANkeKHFLKEEK---NKLSQELST 780
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767962582 688 KVAE----------LLSEEEREKLKVA-VEQWKRQVMSELRERDAQILRERMELLQLAQQR---IKELE 742
Cdd:pfam15921 781 VATEknkmagelevLRSQERRLKEKVAnMEVALDKASLQFAECQDIIQRQEQESVRLKLQHtldVKELQ 849
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
455-777 |
9.68e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.80 E-value: 9.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 455 LDAEREVKTREQLQAEVQRAQaRIEDLEKA--LAEQGQDMKWIEEKQALYRRNQELvEKIKQMETeearlRHEVQDARDQ 532
Cdd:pfam17380 296 MEQERLRQEKEEKAREVERRR-KLEEAEKArqAEMDRQAAIYAEQERMAMEREREL-ERIRQEER-----KRELERIRQE 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 533 NELLEF-RILELE----ERERKSPAIsfhhtpfvdgksplQVYCEAEGVTDIVVAELMKKLDILGDNAVSNLTNEEQVVV 607
Cdd:pfam17380 369 EIAMEIsRMRELErlqmERQQKNERV--------------RQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQ 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 608 IQARTVLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHI-LELEAMLYDALQQEAG 686
Cdd:pfam17380 435 REVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILeKELEERKQAMIEEERK 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 687 AKVAELLSE-------EEREKLKVAVEQWKRQVMSELRERDAQILRERMELLQL-AQQRIKELEERIEAQKRQIKELEEK 758
Cdd:pfam17380 515 RKLLEKEMEerqkaiyEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLeAMEREREMMRQIVESEKARAEYEAT 594
|
330 340
....*....|....*....|....
gi 767962582 759 LSFSGHSPSWHPDV-----PHIES 777
Cdd:pfam17380 595 TPITTIKPIYRPRIseyqpPDVES 618
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
456-545 |
1.53e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 456 DAEREVKTRE--QLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQALYRRNQELV----EKIKQMETEEARLRHEVQDA 529
Cdd:COG2433 405 ERELTEEEEEirRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEERREirkdREISRLDREIERLERELEEE 484
|
90
....*....|....*.
gi 767962582 530 RDQNELLEFRILELEE 545
Cdd:COG2433 485 RERIEELKRKLERLKE 500
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
136-302 |
1.60e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 136 LSEAKEEAKKGFEVEKVKmqqeISELKGAkrQVEEALTLVIQADKikaAEIRSVYHLHQEEITRIKKECEREIRRLEQQL 215
Cdd:COG2433 352 FERVEKKVPPDVDRDEVK----ARVIRGL--SIEEALEELIEKEL---PEEEPEAEREKEHEERELTEEEEEIRRLEEQV 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 216 D--EKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAesqykplldknKRLSRKNEDLSHALRRMENKLKFV 293
Cdd:COG2433 423 ErlEAEVEELEAELEEKDERIERLERELSEARSEERREIRKDREI-----------SRLDREIERLERELEEERERIEEL 491
|
....*....
gi 767962582 294 TQENIEMRQ 302
Cdd:COG2433 492 KRKLERLKE 500
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
87-530 |
1.64e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 87 LQAVRETLLRQHEAELLRVIKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKR 166
Cdd:COG4717 40 LAFIRAMLLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 167 QVEEALTLVIQADKIKAAEIR-----SVYHLHQEEITRIK------KECEREIRRLEQQLDEKDARRFQLKIAELSAIIR 235
Cdd:COG4717 120 KLEKLLQLLPLYQELEALEAElaelpERLEELEERLEELReleeelEELEAELAELQEELEELLEQLSLATEEELQDLAE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 236 KLEDrnalLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLND 315
Cdd:COG4717 200 ELEE----LQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 316 LDQSQDEREVDFLKLQIVEQQNLIDELSKTLETAGYVKSVLERDKLLRFRKQRKKMAKLPKPVVVETFFGYDEEASLESD 395
Cdd:COG4717 276 AGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 396 GSSVSYQTDRtDQTPCTPDDDLEEGMAKEETELRFR-QLTMEYQALQRAYALLQEQV---GGTLDAEREVKTREQLQAEV 471
Cdd:COG4717 356 AEELEEELQL-EELEQEIAALLAEAGVEDEEELRAAlEQAEEYQELKEELEELEEQLeelLGELEELLEALDEEELEEEL 434
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 767962582 472 QRAQARIEDLEKALAEQGQDMKWIEEKQALYRRNQELVEKIKQMETEEARLRHEVQDAR 530
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWA 493
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
26-522 |
1.72e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.26 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 26 EDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHKTavlltELKTKLHEEKMKELQAVRETLLRQHEAELLRV 105
Cdd:TIGR00618 379 QHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRD-----LQGQLAHAKKQQELQQRYAELCAAAITCTAQC 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 106 IKIKDNENQRLQALLSALRDggPEKVKTVLLseaKEEAKKGFEVEKVK--MQQEISELKGAKRQVEEALTLVIQ--ADKI 181
Cdd:TIGR00618 454 EKLEKIHLQESAQSLKEREQ--QLQTKEQIH---LQETRKKAVVLARLleLQEEPCPLCGSCIHPNPARQDIDNpgPLTR 528
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 182 KAAEIRSVYHLHQEEITRIKKECEREIRRleqqldekdarrfqlkIAELSAIIRKLEDRNALLSEERNEL---LKRVREA 258
Cdd:TIGR00618 529 RMQRGEQTYAQLETSEEDVYHQLTSERKQ----------------RASLKEQMQEIQQSFSILTQCDNRSkedIPNLQNI 592
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 259 ESQYKPLLDKNKRLSRKNEDLSHALRR-----MENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDE------REVDF 327
Cdd:TIGR00618 593 TVRLQDLTEKLSEAEDMLACEQHALLRklqpeQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVRehalsiRVLPK 672
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 328 LKLQIVE-----QQNLIDELSKTLETAGYVKSVL--ERDKLLRFRKQRKKMAKLPKPVVVEtfFGYDEEASLESDGS--- 397
Cdd:TIGR00618 673 ELLASRQlalqkMQSEKEQLTYWKEMLAQCQTLLreLETHIEEYDREFNEIENASSSLGSD--LAAREDALNQSLKElmh 750
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 398 --------SVSYQTDRTDQTPCTPDDDLEEGMAKEETELRFRQLtmeyQALQRAYALLQEQVGGTLDAEREVK--TREQL 467
Cdd:TIGR00618 751 qartvlkaRTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLR----EEDTHLLKTLEAEIGQEIPSDEDILnlQCETL 826
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 767962582 468 QAEVQRAQARIEDLEKALAEQGQDMKWIEEKQalyRRNQELVEKIKQMETEEARL 522
Cdd:TIGR00618 827 VQEEEQFLSRLEEKSATLGEITHQLLKYEECS---KQLAQLTQEQAKIIQLSDKL 878
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
651-762 |
1.95e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.49 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 651 YLDEELDYRKQALDQANKHILELEAMLydALQQEA----GAKVAEL-----LSEEEREKLKVAVEQWKRQvMSELRERDA 721
Cdd:PRK09039 43 FLSREISGKDSALDRLNSQIAELADLL--SLERQGnqdlQDSVANLraslsAAEAERSRLQALLAELAGA-GAAAEGRAG 119
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 767962582 722 QI---LRERMELLQLAQQRIKELEERIEAQKRQIKELEEKLSFS 762
Cdd:PRK09039 120 ELaqeLDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDAS 163
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
36-345 |
2.10e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.03 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 36 QIELQQEKS-KVSKVEREKN-QELRQVREHEQHKTAVLLTElKTKLHEEKMKELQAVRETLlRQHEAELLRVIKIK-DNE 112
Cdd:pfam17380 298 QERLRQEKEeKAREVERRRKlEEAEKARQAEMDRQAAIYAE-QERMAMERERELERIRQEE-RKRELERIRQEEIAmEIS 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 113 NQRLQALLSALRDGGPEKVKTVLlsEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEAltlviqadkikaaeirsvyhl 192
Cdd:pfam17380 376 RMRELERLQMERQQKNERVRQEL--EAARKVKILEEERQRKIQQQKVEMEQIRAEQEEA--------------------- 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 193 HQEEITRIKKECEREIRRLEQQLDEKDARRFQLKIAELSAIIRKLE-----DRNALLSEERNELLKRVREAESQyKPLLD 267
Cdd:pfam17380 433 RQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLElekekRDRKRAEEQRRKILEKELEERKQ-AMIEE 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 268 KNKR--LSRKNEDLSHAL----RRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKlQIVEQQNLIDE 341
Cdd:pfam17380 512 ERKRklLEKEMEERQKAIyeeeRRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMR-QIVESEKARAE 590
|
....
gi 767962582 342 LSKT 345
Cdd:pfam17380 591 YEAT 594
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
609-759 |
2.25e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 609 QARTVLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAMLyDALQQEAGAK 688
Cdd:COG4942 31 QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL-EAQKEELAEL 109
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 767962582 689 VAEL--LSEEEREKLKVAVEQWKRQV-MSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKL 759
Cdd:COG4942 110 LRALyrLGRQPPLALLLSPEDFLDAVrRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAEL 183
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
600-772 |
2.75e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 600 TNEEQVVVIQARtvLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDY------------RKQALDQAN 667
Cdd:COG4913 607 DNRAKLAALEAE--LAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVasaereiaeleaELERLDASS 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 668 KHILELEAMLYDALQQEAGAKVAELLSEEEREKLKVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKE------- 740
Cdd:COG4913 685 DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAalgdave 764
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 767962582 741 ------LEERIEAQKRQIKELEEKL--SFSGHSPSWHPDV 772
Cdd:COG4913 765 relrenLEERIDALRARLNRAEEELerAMRAFNREWPAET 804
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
31-298 |
2.89e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 31 KLTDIQIELQQEKSKVSKVEREKNQELRQVREHEqhkTAVLLTELKTKlhEEKMKELqavrETLLRQHEAELLRVIKIKD 110
Cdd:PRK05771 61 KLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEE---LEKIEKEIKEL--EEEISEL----ENEIKELEQEIERLEPWGN 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 111 nenqrLQALLSALRDGGPEKVKTVLLSEAKEEAKKgfEVEKVKMQQEISELKGAKrqveealTLVIQADKIKAAEIrsvy 190
Cdd:PRK05771 132 -----FDLDLSLLLGFKYVSVFVGTVPEDKLEELK--LESDVENVEYISTDKGYV-------YVVVVVLKELSDEV---- 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 191 hlhqeeitrikkecEREIRRLEqqldekdARRFQLK-IAELSAIIRKLEDRNALLSEERNELLKRVREAESQYkplldkN 269
Cdd:PRK05771 194 --------------EEELKKLG-------FERLELEeEGTPSELIREIKEELEEIEKERESLLEELKELAKKY------L 246
|
250 260
....*....|....*....|....*....
gi 767962582 270 KRLSRKNEDLSHALRRMENKLKFVTQENI 298
Cdd:PRK05771 247 EELLALYEYLEIELERAEALSKFLKTDKT 275
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
462-546 |
3.20e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 462 KTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQALYRRNQELVEKIKQMETeearLRHEVQDARDQNELLEFRIL 541
Cdd:COG1579 38 DELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEYEA----LQKEIESLKRRISDLEDEIL 113
|
....*
gi 767962582 542 ELEER 546
Cdd:COG1579 114 ELMER 118
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
583-759 |
3.29e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.07 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 583 ELMKKLDILGD--NAVSNLTNEEQVVVIQ-ARTVLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQK------GYLD 653
Cdd:PRK05771 54 KLSEALDKLRSylPKLNPLREEKKKVSVKsLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIerlepwGNFD 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 654 EELDYrkqALDQANKHIL--ELEAMLYDALQQEAGAKVAELLSEEEREKLKVAVeqwkrqVMSELRERDAQILR----ER 727
Cdd:PRK05771 134 LDLSL---LLGFKYVSVFvgTVPEDKLEELKLESDVENVEYISTDKGYVYVVVV------VLKELSDEVEEELKklgfER 204
|
170 180 190
....*....|....*....|....*....|....
gi 767962582 728 MELLQ--LAQQRIKELEERIEAQKRQIKELEEKL 759
Cdd:PRK05771 205 LELEEegTPSELIREIKEELEEIEKERESLLEEL 238
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
25-360 |
3.29e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.16 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 25 NEDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHKTAVLLTELKTKLHEEKMKelqavretlLRQHEAELLR 104
Cdd:TIGR04523 262 QNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKK---------LEEIQNQISQ 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 105 VIKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALtlviqadkikaa 184
Cdd:TIGR04523 333 NNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKI------------ 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 185 eirsvyhlhqEEITRIKKECEREIRRLEQQLDEKDARRFQLK--IAELSAIIRKLEDRNALLSEERNELLKRVREAESQY 262
Cdd:TIGR04523 401 ----------QNQEKLNQQKDEQIKKLQQEKELLEKEIERLKetIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 263 KPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDEL 342
Cdd:TIGR04523 471 KVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD 550
|
330
....*....|....*...
gi 767962582 343 SKTLETAGYVKSVLERDK 360
Cdd:TIGR04523 551 DFELKKENLEKEIDEKNK 568
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
26-293 |
3.36e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.36 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 26 EDLRaKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHktaVLLTELKTKLHEEKMKELQAVRETLlrqheAELLRV 105
Cdd:pfam12128 653 LDLR-RLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLK---QLDKKHQAWLEEQKEQKREARTEKQ-----AYWQVV 723
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 106 IKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEVEKV-KMQQEISELKGAKRQVEEALTLVIQADKIkaa 184
Cdd:pfam12128 724 EGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIaKLKREIRTLERKIERIAVRRQEVLRYFDW--- 800
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 185 eIRSVYHLHQEEITRIKKECEREIRRLEQQLD--EKDARRFQLKIAELSAIIRKLEDR-NALLSEERNEL--LKRVRE-- 257
Cdd:pfam12128 801 -YQETWLQRRPRLATQLSNIERAISELQQQLArlIADTKLRRAKLEMERKASEKQQVRlSENLRGLRCEMskLATLKEda 879
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 767962582 258 ----AESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFV 293
Cdd:pfam12128 880 nseqAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNV 919
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
621-759 |
5.29e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 5.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 621 LQQIEETEAAL-----QRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAmlydALQQEAGAKVAELlsE 695
Cdd:COG4913 271 LAELEYLRAALrlwfaQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEA----QIRGNGGDRLEQL--E 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 696 EEREKLKVAVEQWKR--------------------QVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKEL 755
Cdd:COG4913 345 REIERLERELEERERrrarleallaalglplpasaEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELREL 424
|
....
gi 767962582 756 EEKL 759
Cdd:COG4913 425 EAEI 428
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
25-265 |
6.21e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.49 E-value: 6.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 25 NEDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQvrEHEQHKTAVLLTELKTKLHEEKMKELQAV-------RETLLRQ 97
Cdd:pfam17380 362 LERIRQEEIAMEISRMRELERLQMERQQKNERVRQ--ELEAARKVKILEEERQRKIQQQKVEMEQIraeqeeaRQREVRR 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 98 HEAELLRVIKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEVEKVKMQQEisELKGAKRQVEEALtlviQ 177
Cdd:pfam17380 440 LEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEK--ELEERKQAMIEEE----R 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 178 ADKIKAAEIRSVYHLHQEEITRIKKEcerEIRRLEQQLDEKdaRRFQLKIAELSaiirklEDRNALLSEERN-ELLKRVR 256
Cdd:pfam17380 514 KRKLLEKEMEERQKAIYEEERRREAE---EERRKQQEMEER--RRIQEQMRKAT------EERSRLEAMERErEMMRQIV 582
|
....*....
gi 767962582 257 EAESQYKPL 265
Cdd:pfam17380 583 ESEKARAEY 591
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
35-296 |
6.24e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.39 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 35 IQIELQQEKSKVSKVEREKNQELRQVREHEQHKTAVLLT----ELKTKLHEEKMKELQAVRETLLRQHEAELLRVIK--- 107
Cdd:TIGR04523 361 KQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKiqnqEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKnns 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 108 -IKDNENQRLQ-----ALLSALRDGGPEKVKTVLLSEAKEEAK-KGFEVEKVKMQQEISELKGAKRQVEE---------- 170
Cdd:TIGR04523 441 eIKDLTNQDSVkeliiKNLDNTRESLETQLKVLSRSINKIKQNlEQKQKELKSKEKELKKLNEEKKELEEkvkdltkkis 520
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 171 ALTLVIQADKIKAAEIRSVYHLHQEEITRIKKECEREirRLEQQLDEKDARRFQLK--IAELSAIIRKLEDRNALLSEER 248
Cdd:TIGR04523 521 SLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKE--NLEKEIDEKNKEIEELKqtQKSLKKKQEEKQELIDQKEKEK 598
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 767962582 249 NELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQE 296
Cdd:TIGR04523 599 KDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQE 646
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
196-523 |
6.31e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.44 E-value: 6.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 196 EITRIKKECEREIRRLEQQLD--EKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLS 273
Cdd:TIGR02169 706 ELSQELSDASRKIGEIEKEIEqlEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLE 785
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 274 RKneDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTLEtagyvk 353
Cdd:TIGR02169 786 AR--LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE------ 857
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 354 svlerdkLLRFRKqRKKMAKLPKPVVvetffgydEEASLESDGSSVSYQTDRTDQTPCTPDDDLEEGMAK-EETELRFRQ 432
Cdd:TIGR02169 858 -------NLNGKK-EELEEELEELEA--------ALRDLESRLGDLKKERDELEAQLRELERKIEELEAQiEKKRKRLSE 921
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 433 LTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQAEVQRAQARIEDLEKAlaeqgqDMKWIEEKQALYRRNQELVEKI 512
Cdd:TIGR02169 922 LKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPV------NMLAIQEYEEVLKRLDELKEKR 995
|
330
....*....|.
gi 767962582 513 KQMETEEARLR 523
Cdd:TIGR02169 996 AKLEEERKAIL 1006
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
422-549 |
7.12e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 7.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 422 AKEETELRFRQLTMEYQALQRAYAllqeQVGGtldaerevKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQAL 501
Cdd:COG4913 310 ELERLEARLDALREELDELEAQIR----GNGG--------DRLEQLEREIERLERELEERERRRARLEALLAALGLPLPA 377
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 767962582 502 YRRN-QELVEKIKQMETEEARLRHEVQDARDQnelLEFRILELEERERK 549
Cdd:COG4913 378 SAEEfAALRAEAAALLEALEEELEALEEALAE---AEAALRDLRRELRE 423
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
168-292 |
7.51e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 40.08 E-value: 7.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 168 VEEALTLVIQADKIKAAEIRSVYHLHQEEITRIKKECEREIRRLEQQLDEKDARRFQLKIAE--LSAIIRKLEDRNALLS 245
Cdd:PRK12705 43 QKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQREEERLVQKEEQLDARAEKLDNLEnqLEEREKALSARELELE 122
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 767962582 246 EERNEL---LKRVR--EAESQYKPLLdknKRLSRK-NEDLSHALRRMENKLKF 292
Cdd:PRK12705 123 ELEKQLdneLYRVAglTPEQARKLLL---KLLDAElEEEKAQRVKKIEEEADL 172
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
651-768 |
8.78e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.36 E-value: 8.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767962582 651 YLDEELDYRKQALDQANKHILELEAMLydALQQEAGAKVAELLSEEEREKLKVAVEQWKRQVMSELRERDAQILRERMEL 730
Cdd:COG4942 140 YLKYLAPARREQAEELRADLAELAALR--AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE 217
|
90 100 110
....*....|....*....|....*....|....*...
gi 767962582 731 LQLAQQRIKELEERIEAQKRQIKELEEKLSFSGHSPSW 768
Cdd:COG4942 218 LQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| |
