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Conserved domains on  [gi|768006883|ref|XP_011524831|]
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proline and serine-rich protein 3 isoform X2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK12323 super family cl46901
DNA polymerase III subunit gamma/tau;
399-518 6.52e-07

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK14951:

Pssm-ID: 481241 [Multi-domain]  Cd Length: 618  Bit Score: 52.79  E-value: 6.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 399 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 470
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 768006883 471 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 518
Cdd:PRK14951 446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 268-622 3.31e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 3.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  268 PAPAPASSQAPLRPEDdilyqwrqrRKLEQAQGSKGDRAWVPPLTPALRTLI-----SLICLQTSPAPVETLSSLGTQPN 342
Cdd:PHA03247 2560 PPAAPDRSVPPPRPAP---------RPSEPAVTSRARRPDAPPQSARPRAPVddrgdPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  343 HVPLWSSVAQPGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPA 418
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPE 2709

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  419 SLASTLEPPASTP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAA 497
Cdd:PHA03247 2710 PAPHALVSATPLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  498 EQVPAAGQGPGPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC----------- 566
Cdd:PHA03247 2790 SLSESRESLPSPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrr 2864

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006883  567 RAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 622
Cdd:PHA03247 2865 RPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
 
Name Accession Description Interval E-value
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 399-518 6.52e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 52.79  E-value: 6.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 399 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 470
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 768006883 471 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 518
Cdd:PRK14951 446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 PHA03247
large tegument protein UL36; Provisional
 268-622 3.31e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 3.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  268 PAPAPASSQAPLRPEDdilyqwrqrRKLEQAQGSKGDRAWVPPLTPALRTLI-----SLICLQTSPAPVETLSSLGTQPN 342
Cdd:PHA03247 2560 PPAAPDRSVPPPRPAP---------RPSEPAVTSRARRPDAPPQSARPRAPVddrgdPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  343 HVPLWSSVAQPGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPA 418
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPE 2709

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  419 SLASTLEPPASTP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAA 497
Cdd:PHA03247 2710 PAPHALVSATPLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  498 EQVPAAGQGPGPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC----------- 566
Cdd:PHA03247 2790 SLSESRESLPSPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrr 2864

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006883  567 RAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 622
Cdd:PHA03247 2865 RPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
 
Name Accession Description Interval E-value
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 399-518 6.52e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 52.79  E-value: 6.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 399 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 470
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 768006883 471 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 518
Cdd:PRK14951 446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 PHA03247
large tegument protein UL36; Provisional
 268-622 3.31e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 3.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  268 PAPAPASSQAPLRPEDdilyqwrqrRKLEQAQGSKGDRAWVPPLTPALRTLI-----SLICLQTSPAPVETLSSLGTQPN 342
Cdd:PHA03247 2560 PPAAPDRSVPPPRPAP---------RPSEPAVTSRARRPDAPPQSARPRAPVddrgdPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  343 HVPLWSSVAQPGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPA 418
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPE 2709

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  419 SLASTLEPPASTP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAA 497
Cdd:PHA03247 2710 PAPHALVSATPLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  498 EQVPAAGQGPGPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC----------- 566
Cdd:PHA03247 2790 SLSESRESLPSPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrr 2864

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006883  567 RAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 622
Cdd:PHA03247 2865 RPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
PHA03247 PHA03247
large tegument protein UL36; Provisional
 232-619 3.76e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 3.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  232 SDGLSPFSETFIPDSSKGLGPRAPASPAPAQaqtptPAPAPASSQAPLRPEDDILYQWrqRRKLEQ-AQGSKGDRAwvPP 310
Cdd:PHA03247 2484 AEARFPFAAGAAPDPGGGGPPDPDAPPAPSR-----LAPAILPDEPVGEPVHPRMLTW--IRGLEElASDDAGDPP--PP 2554

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  311 LTPALRTLI---SLICLQTSPAPVE-TLSSLGTQPNHVPLWSSVAQPG-PPEAFYVERPPFPSVSSPHIFWAPSSHGFFW 385
Cdd:PHA03247 2555 LPPAAPPAApdrSVPPPRPAPRPSEpAVTSRARRPDAPPQSARPRAPVdDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA 2634

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  386 APQSGPWVSLGAVPPTQQASTlahlgstlapPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVP 465
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDD----------PAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPP 2704

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  466 QGLPIPDPS--SCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPgpqlrgvlgqvvaarLFPDSLEDTPPHFEGPPPPKA 543
Cdd:PHA03247 2705 PPTPEPAPHalVSATPLPPGPAAARQASPALPAAPAPPAVPAGP---------------ATPGGPARPARPPTTAGPPAP 2769

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 768006883  544 GSPKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPP 619
Cdd:PHA03247 2770 APPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP 2845
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
396-608 1.45e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.72  E-value: 1.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 396 GAVPPTQQASTLAhlgsTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSS 475
Cdd:PRK12323 371 GAGPATAAAAPVA----QPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 476 CAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQAtqpQT 555
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGW---VA 523

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 768006883 556 KVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPA 608
Cdd:PRK12323 524 ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDM 576
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 386-521 2.47e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 47.79  E-value: 2.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 386 APQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTlAPPASTPAPLACTPAPPAstlasPAVP 465
Cdd:PRK14951 384 PEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPA-AAPAAAPAAVALAPAPPA-----QAAP 457

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006883 466 QGLPIPDPsscAQPKSLGPKSRRSRAPRPEAAEQVPAAgqgPGPQLRGVLGQVVAA 521
Cdd:PRK14951 458 ETVAIPVR---VAPEPAVASAAPAPAAAPAAARLTPTE---EGDVWHATVQQLAAA 507
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 425-519 4.86e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 47.19  E-value: 4.86e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  425 EPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSlgpksrrSRAPRPEAAEQVPAAG 504
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------AAPPAAAAAAAPAAAA 112

                          90
                  ....*....|....*.
gi 768006883  505 QGPGPQ-LRGVLGQVV 519
Cdd:PRK12270  113 VEDEVTpLRGAAAAVA 128
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
325-522 6.99e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 46.41  E-value: 6.99e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 325 QTSPAPVETLSSLGTQPNHVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIfwapsshgffwAPQSGPWVSLGAVPPTQQA 404
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVA-----------AAPARRSPAPEALAAARQA 439

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 405 STLAHLGSTLAPPAslastlepPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPA-----------VPQGLPIPDP 473
Cdd:PRK12323 440 SARGPGGAPAPAPA--------PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApadddpppweeLPPEFASPAP 511

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 768006883 474 ----SSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAAR 522
Cdd:PRK12323 512 aqpdAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPR 564
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 386-521 1.74e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.36  E-value: 1.74e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 386 APQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLAstlePPASTPAPLASTLAPPASTPAPlacTPAPPASTLASPAVP 465
Cdd:PRK07764 380 RLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAA----APAAAAAPAPAAAPQPAPAPAP---APAPPSPAGNAPAGG 452

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 466 QGLPIPDPSSCAQPK---------SLGPKSRRSRAPRPEAAEQVPAA-----GQGPGPQLRGVLGQVVAA 521
Cdd:PRK07764 453 APSPPPAAAPSAQPApapaaapepTAAPAPAPPAAPAPAAAPAAPAApaapaGADDAATLRERWPEILAA 522
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
395-500 1.90e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.77  E-value: 1.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 395 LGAVPPTQQASTLAHLGStlapPASLASTLEPPASTPAPLASTLAPPASTPAPLAcTPAPPASTLASPAVPQGLPIPDPS 474
Cdd:PRK14971 384 TQPAAAPQPSAAAAASPS----PSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAA-VPVNPPSTAPQAVRPAQFKEEKKI 458

                         90       100
                 ....*....|....*....|....*.
gi 768006883 475 SCAQPKSLGPKSRRsraPRPEAAEQV 500
Cdd:PRK14971 459 PVSKVSSLGPSTLR---PIQEKAEQA 481
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
377-510 2.63e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 44.46  E-value: 2.63e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 377 APSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLA-----STLEPPASTPAPLASTLAPPASTPAPLACT 451
Cdd:PRK07003 387 AAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAppataDRGDDAADGDAPVPAKANARASADSRCDER 466

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 768006883 452 PAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQ 510
Cdd:PRK07003 467 DAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAA 525
PHA03247 PHA03247
large tegument protein UL36; Provisional
 2-507 2.95e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.54  E-value: 2.95e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883    2 DRSLPVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKT-LSPSRSQRSRLPQAPKALATGPNSPelfeeswPSSSGTPSLPS 80
Cdd:PHA03247 2565 DRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRApVDDRGDPRGPAPPSPLPPDTHAPDP-------PPPSPSPAANE 2637

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883   81 TTEGQMWASPAPTLIDSGDSVvakyiNRFRQAQPTSREERQPAGPTPADFWwlqsdspdpssqsaagankpegRPHTAVP 160
Cdd:PHA03247 2638 PDPHPPPTVPPPERPRDDPAP-----GRVSRPRRARRLGRAAQASSPPQRP----------------------RRRAARP 2690

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  161 TAVNVTSASHAVAPLQEIKQNLHTWNSSLldleTLSLQSRAARllkrskasisssSSLSPSDASTSSFPTSSDGLSPFSE 240
Cdd:PHA03247 2691 TVGSLTSLADPPPPPPTPEPAPHALVSAT----PLPPGPAAAR------------QASPALPAAPAPPAVPAGPATPGGP 2754

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  241 TfipdsskglgpRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLIS 320
Cdd:PHA03247 2755 A-----------RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAAS 2823

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  321 ---LICLQTSPAPVETLSSLGTQPNHVPLWSSVAQPGPpeaFYVERPPFPSVSSPHifwapsshgffwAPQSGPWVSLGA 397
Cdd:PHA03247 2824 pagPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGD---VRRRPPSRSPAAKPA------------APARPPVRRLAR 2888

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  398 VPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCA 477
Cdd:PHA03247 2889 PAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALV 2968

                         490       500       510
                  ....*....|....*....|....*....|
gi 768006883  478 QPKSLGPksrRSRAPRPEAAEQVPAAGQGP 507
Cdd:PHA03247 2969 PGRVAVP---RFRVPQPAPSREAPASSTPP 2995
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 396-585 3.01e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.59  E-value: 3.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 396 GAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAV-----PQGLPI 470
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAsdggdGWPAKA 673

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 471 PDPSSCAQPKSLGPKSRRSRAPRPEAAEQ-----VPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGS 545
Cdd:PRK07764 674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPApapaaTPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 768006883 546 PKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSV 585
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSM 793
PHA03247 PHA03247
large tegument protein UL36; Provisional
 353-625 5.39e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.77  E-value: 5.39e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  353 PGPPEAFYVERPPFPSVSSPHIFwAPSSHGFFWAPQSGPWV----------SLGAVPPTQQASTLAHLGSTLAPPASLAS 422
Cdd:PHA03247 2498 PGGGGPPDPDAPPAPSRLAPAIL-PDEPVGEPVHPRMLTWIrgleelasddAGDPPPPLPPAAPPAAPDRSVPPPRPAPR 2576

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  423 TLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPK-SLGPKSRRSRAPRPEAAEQVP 501
Cdd:PHA03247 2577 PSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAaNEPDPHPPPTVPPPERPRDDP 2656

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  502 AAGQGPGPQLRGVLGQVVAA---------RLFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKAES 572
Cdd:PHA03247 2657 APGRVSRPRRARRLGRAAQAssppqrprrRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 768006883  573 LKAKALPPAAGSVIRKSEATP-SPGACLQPEVPLSPAEQATTVKASPPAFQVGS 625
Cdd:PHA03247 2737 AAPAPPAVPAGPATPGGPARPaRPPTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790
PRK11855 PRK11855
dihydrolipoamide acetyltransferase; Reviewed
 411-511 1.50e-03

dihydrolipoamide acetyltransferase; Reviewed


Pssm-ID: 237000 [Multi-domain]  Cd Length: 547  Bit Score: 42.12  E-value: 1.50e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 411 GSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQ-----GLPIpdpsscAQPKSLGPK 485
Cdd:PRK11855 196 AAAPAAAAAPAAAAPAAAAAAAPAPAPAAAAAPAAAAPAAAAAPGKAPHASPAVRRlarelGVDL------SQVKGTGKK 269

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 768006883 486 SR----------RSRAPRPEAAEQVPAAGQGPGPQL 511
Cdd:PRK11855 270 GRitkedvqafvKGAMSAAAAAAAAAAAAGGGGLGL 305
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
427-620 1.63e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.14  E-value: 1.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 427 PASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQG 506
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRG 439

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 507 PGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSvi 586
Cdd:PRK07003 440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS-- 517

                        170       180       190
                 ....*....|....*....|....*....|....
gi 768006883 587 RKSEATPspgaclqPEVPLSPAEQATTVKASPPA 620
Cdd:PRK07003 518 REDAPAA-------AAPPAPEARPPTPAAAAPAA 544
PHA03378 PHA03378
EBNA-3B; Provisional
 355-595 2.04e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 41.59  E-value: 2.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 355 PPEAFYVERPPfPSVSSPHIFWAPSSHGFFWAPQSGPwvslGAVPPTQQASTLAHlgstlaPPASLASTLEPPASTP--- 431
Cdd:PHA03378 706 PPAAPPGRAQR-PAAATGRARPPAAAPGRARPPAAAP----GRARPPAAAPGRAR------PPAAAPGRARPPAAAPgap 774

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 432 APLASTLAPPA------STPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQ 505
Cdd:PHA03378 775 TPQPPPQAPPApqqrprGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAAGP 854

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 506 GPGPQLRGVLGQVVAARLFPDSLEdtpphfEGPPPPKAGSPKVQATQPQTKVtpPPSESQCRAKAESLKAKALPPAAGSv 585
Cdd:PHA03378 855 TPSPGSGTSDKIVQAPVFYPPVLQ------PIQVMRQLGSVRAAAASTVTQA--PTEYTGERRGVGPMHPTDIPPSKRA- 925

                        250
                 ....*....|
gi 768006883 586 irKSEATPSP 595
Cdd:PHA03378 926 --KTDAYVES 933
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
391-623 2.14e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.76  E-value: 2.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 391 PWVSLGAVPPTQQASTLAhlGSTLAPPASLASTLEPPASTPAPLAStlAPPASTPAPLACTPAPPASTLASPAVPQGLPI 470
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVA--GAVPAPGARAAAAVGASAVPAVTAVT--GAAGAALAPKAAAAAAATRAEAPPAAPAPPAT 435

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 471 PDP--SSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPkv 548
Cdd:PRK07003 436 ADRgdDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAP-- 513

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 549 qATQPQTKVTPPPSESQCRAKAESLKAKALPPAAG------SVIR------KSEATPSPGACLQPEVPLSPAEQATtvkA 616
Cdd:PRK07003 514 -AAASREDAPAAAAPPAPEARPPTPAAAAPAARAGgaaaalDVLRnagmrvSSDRGARAAAAAKPAAAPAAAPKPA---A 589


                 ....*..
gi 768006883 617 SPPAFQV 623
Cdd:PRK07003 590 PRVAVQV 596
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 413-510 3.84e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 40.56  E-value: 3.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 413 TLAPPASLASTLEPPASTPAPLASTLAPpASTPAPLACTPAPPASTLASPAVPQGLPI-PDPSSCAQPKSLGPKSRRSRA 491
Cdd:PRK14950 358 ALLVPVPAPQPAKPTAAAPSPVRPTPAP-STRPKAAAAANIPPKEPVRETATPPPVPPrPVAPPVPHTPESAPKLTRAAI 436

                         90
                 ....*....|....*....
gi 768006883 492 PRPEAAEqvpaaGQGPGPQ 510
Cdd:PRK14950 437 PVDEKPK-----YTPPAPP 450
PRK14965 PRK14965
DNA polymerase III subunits gamma and tau; Provisional
 411-504 6.59e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237871 [Multi-domain]  Cd Length: 576  Bit Score: 40.11  E-value: 6.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 411 GSTLAPPASLASTLE--------------PPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSC 476
Cdd:PRK14965 358 MATLAPGAPVSELLDrlealergapappsAAWGAPTPAAPAAPPPAAAPPVPPAAPARPAAARPAPAPAPPAAAAPPARS 437

                         90       100
                 ....*....|....*....|....*...
gi 768006883 477 AQPKSLGPKSRRSRAPRPEAAEQVPAAG 504
Cdd:PRK14965 438 ADPAAAASAGDRWRAFVAFVKGKKPALG 465
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 404-504 7.76e-03

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 39.55  E-value: 7.76e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 404 ASTLAHLGSTLAPPASLAStlePPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAvpQGLPIPDPSSCAQPKSLG 483
Cdd:PTZ00436 230 AKAAAPPAKAAAAPAKAAA---APAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPA--KAAAPPAKAAAAPAKAAA 304

                         90       100
                 ....*....|....*....|.
gi 768006883 484 PKSRRSRAPRPEAAEQVPAAG 504
Cdd:PTZ00436 305 APAKAAAAPAKAAAPPAKAAA 325
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 416-503 7.91e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 39.85  E-value: 7.91e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 416 PPASLASTLEPPAST-PAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKS-LGPKSRRSRAPR 493
Cdd:PRK07994 361 PAAPLPEPEVPPQSAaPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQqLQRAQGATKAKK 440

                         90
                 ....*....|
gi 768006883 494 PEAAEQVPAA 503
Cdd:PRK07994 441 SEPAAASRAR 450
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 337-509 8.42e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.58  E-value: 8.42e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 337 LGTQPNHVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHLGSTLAP 416
Cdd:PRK07764 588 VGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883 417 PASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPqglPIPDPSSCAQPKSLGPKSRRSRAPRPEA 496
Cdd:PRK07764 668 GWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADD---PAAQPPQAAQGASAPSPAADDPVPLPPE 744

                        170
                 ....*....|...
gi 768006883 497 AEQVPAAGQGPGP 509
Cdd:PRK07764 745 PDDPPDPAGAPAQ 757
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 378-472 8.70e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 39.87  E-value: 8.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006883  378 PSSHGFFWAPQSGPwvslgaVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPAS 457
Cdd:PRK12270   27 PSWREFFADYGPGS------TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP 100

                          90
                  ....*....|....*
gi 768006883  458 TLASPAVPQGLPIPD 472
Cdd:PRK12270  101 AAAAAAAPAAAAVED 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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