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Conserved domains on  [gi|530390391|ref|XP_005251698|]
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rab9 effector protein with kelch motifs isoform X3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
56-226 8.18e-25

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 101.39  E-value: 8.18e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  56 GKVFIVGGANPNRSFSDVHTMDLETRTWTTpevTSPPPSPRTFHTSSAAIGNQLYVFGG-GERGAQPVQDTKLHVFDANT 134
Cdd:COG3055   23 GKVYVAGGLSGGSASNSFEVYDPATNTWSE---LAPLPGPPRHHAAAVAQDGKLYVFGGfTGANPSSTPLNDVYVYDPAT 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 135 LTWSQpetLGNPPSPRHGHVMVAAGTKLFIHGGLAGDRFYDDLHCIDISDMKWQKLNPTGAAPAGCAAhsAVAMGKHVYI 214
Cdd:COG3055  100 NTWTK---LAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTPRDHLAA--AVLPDGKILV 174
                        170
                 ....*....|..
gi 530390391 215 FGGMTPAGALDT 226
Cdd:COG3055  175 IGGRNGSGFSNT 186
 
Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
56-226 8.18e-25

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 101.39  E-value: 8.18e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  56 GKVFIVGGANPNRSFSDVHTMDLETRTWTTpevTSPPPSPRTFHTSSAAIGNQLYVFGG-GERGAQPVQDTKLHVFDANT 134
Cdd:COG3055   23 GKVYVAGGLSGGSASNSFEVYDPATNTWSE---LAPLPGPPRHHAAAVAQDGKLYVFGGfTGANPSSTPLNDVYVYDPAT 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 135 LTWSQpetLGNPPSPRHGHVMVAAGTKLFIHGGLAGDRFYDDLHCIDISDMKWQKLNPTGAAPAGCAAhsAVAMGKHVYI 214
Cdd:COG3055  100 NTWTK---LAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTPRDHLAA--AVLPDGKILV 174
                        170
                 ....*....|..
gi 530390391 215 FGGMTPAGALDT 226
Cdd:COG3055  175 IGGRNGSGFSNT 186
PLN02193 PLN02193
nitrile-specifier protein
83-237 2.04e-20

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 91.56  E-value: 2.04e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  83 WTTPEVTSPPPSPRTFHtSSAAIGNQLYVFGGGERGAQPVqDTKLHVFDANTLTWS-QPETLGNPPSPRHGHVMVAAGTK 161
Cdd:PLN02193 153 WIKVEQKGEGPGLRCSH-GIAQVGNKIYSFGGEFTPNQPI-DKHLYVFDLETRTWSiSPATGDVPHLSCLGVRMVSIGST 230
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530390391 162 LFIHGGLAGDRFYDDLHCIDISDMKWQKLNPTGAAPAGCAAHSAVAMGKHVYIFGGMTPAGALDTMYQYHTEEQHW 237
Cdd:PLN02193 231 LYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKW 306
Kelch_3 pfam13415
Galactose oxidase, central domain;
106-158 9.13e-07

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 44.97  E-value: 9.13e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 530390391  106 GNQLYVFGGGERGAQPVqDTKLHVFDANTLTWsqpETLGNPPSPRHGHVMVAA 158
Cdd:pfam13415   1 GDKLYIFGGLGFDGQTR-LNDLYVYDLDTNTW---TQIGDLPPPRSGHSATYI 49
 
Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
56-226 8.18e-25

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 101.39  E-value: 8.18e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  56 GKVFIVGGANPNRSFSDVHTMDLETRTWTTpevTSPPPSPRTFHTSSAAIGNQLYVFGG-GERGAQPVQDTKLHVFDANT 134
Cdd:COG3055   23 GKVYVAGGLSGGSASNSFEVYDPATNTWSE---LAPLPGPPRHHAAAVAQDGKLYVFGGfTGANPSSTPLNDVYVYDPAT 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 135 LTWSQpetLGNPPSPRHGHVMVAAGTKLFIHGGLAGDRFYDDLHCIDISDMKWQKLNPTGAAPAGCAAhsAVAMGKHVYI 214
Cdd:COG3055  100 NTWTK---LAPMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQLAPLPTPRDHLAA--AVLPDGKILV 174
                        170
                 ....*....|..
gi 530390391 215 FGGMTPAGALDT 226
Cdd:COG3055  175 IGGRNGSGFSNT 186
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
21-227 8.12e-23

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 95.61  E-value: 8.12e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  21 PRKATWYTLtvpGDSPCARVGHSCSYLppvgnakRGKVFIVGGANPNRSFSDVHTMDLETRTWTTpevTSPPPSPRTFHT 100
Cdd:COG3055   97 PATNTWTKL---APMPTPRGGATALLL-------DGKIYVVGGWDDGGNVAWVEVYDPATGTWTQ---LAPLPTPRDHLA 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 101 SSAAIGNQLYVFGGGErgaqpvqdtklhvFDANTLTWSqpeTLGNPPSPRHGHVMVAAGTKLFIHGGLAGdrFYDDLHCI 180
Cdd:COG3055  164 AAVLPDGKILVIGGRN-------------GSGFSNTWT---TLAPLPTARAGHAAAVLGGKILVFGGESG--FSDEVEAY 225
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 530390391 181 DISDMKWQKLNPTgaaPAGCAAHSAVAMGKHVYIFGGMTPAGALDTM 227
Cdd:COG3055  226 DPATNTWTALGEL---PTPRHGHAAVLTDGKVYVIGGETKPGVRTPL 269
PLN02193 PLN02193
nitrile-specifier protein
83-237 2.04e-20

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 91.56  E-value: 2.04e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  83 WTTPEVTSPPPSPRTFHtSSAAIGNQLYVFGGGERGAQPVqDTKLHVFDANTLTWS-QPETLGNPPSPRHGHVMVAAGTK 161
Cdd:PLN02193 153 WIKVEQKGEGPGLRCSH-GIAQVGNKIYSFGGEFTPNQPI-DKHLYVFDLETRTWSiSPATGDVPHLSCLGVRMVSIGST 230
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530390391 162 LFIHGGLAGDRFYDDLHCIDISDMKWQKLNPTGAAPAGCAAHSAVAMGKHVYIFGGMTPAGALDTMYQYHTEEQHW 237
Cdd:PLN02193 231 LYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKW 306
PLN02153 PLN02153
epithiospecifier protein
93-236 8.82e-20

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 88.50  E-value: 8.82e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  93 PSPRTFHtSSAAIGNQLYVFGGgERGAQPVQDTKLHVFDANTLTWSQPETLGNPPS-PRHGHVMVAAGTKLFIHGGLAGD 171
Cdd:PLN02153  20 PGPRCSH-GIAVVGDKLYSFGG-ELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRiSCLGVRMVAVGTKLYIFGGRDEK 97
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 530390391 172 RFYDDLHCIDISDMKWQ---KLNPTGAaPAGCAAHSAVAMGKHVYIFGGMTPAGALDTMYQYHTEEQH 236
Cdd:PLN02153  98 REFSDFYSYDTVKNEWTfltKLDEEGG-PEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAY 164
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
82-240 1.81e-19

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 86.36  E-value: 1.81e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  82 TWTTpevTSPPPSPRTfHTSSAAIGNQLYVFGGGERGAQPvqdTKLHVFDANTLTWSQpetLGNPP-SPRHGHVMVAAGT 160
Cdd:COG3055    2 TWSS---LPDLPTPRS-EAAAALLDGKVYVAGGLSGGSAS---NSFEVYDPATNTWSE---LAPLPgPPRHHAAAVAQDG 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 161 KLFIHGGLAGD----RFYDDLHCIDISDMKWQKLNPtgaAPAGCAAHSAVAMGKHVYIFGGMTPAGALDTMYQYHTEEQH 236
Cdd:COG3055   72 KLYVFGGFTGAnpssTPLNDVYVYDPATNTWTKLAP---MPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGT 148

                 ....
gi 530390391 237 WTLL 240
Cdd:COG3055  149 WTQL 152
PLN02193 PLN02193
nitrile-specifier protein
17-240 2.18e-17

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 82.70  E-value: 2.18e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  17 PGDKPRKATWYTLTVPGDSPCARVGHScsyLPPVGNakrgKVFIVGGA-NPNRSFSD-VHTMDLETRTWTTPEVTSPPPS 94
Cdd:PLN02193 144 PSTPKLLGKWIKVEQKGEGPGLRCSHG---IAQVGN----KIYSFGGEfTPNQPIDKhLYVFDLETRTWSISPATGDVPH 216
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  95 PRTFHTSSAAIGNQLYVFGGgeRGAQPvQDTKLHVFDANTLTWSQPETLGNPPSPRHGHVMVAAGTKLFIHGGLA----- 169
Cdd:PLN02193 217 LSCLGVRMVSIGSTLYVFGG--RDASR-QYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSatarl 293
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 170 -------------------GDRF-------------------------YDDLHCIDISDMKWQKLNPTGAAPAGCAAHSA 205
Cdd:PLN02193 294 ktldsynivdkkwfhcstpGDSFsirggaglevvqgkvwvvygfngceVDDVHYYDPVQDKWTQVETFGVRPSERSVFAS 373
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 530390391 206 VAMGKHVYIFGG---------MTPAGALDTMYQYHTEEQHWTLL 240
Cdd:PLN02193 374 AAVGKHIVIFGGeiamdplahVGPGQLTDGTFALDTETLQWERL 417
PLN02153 PLN02153
epithiospecifier protein
25-217 2.15e-15

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 75.79  E-value: 2.15e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  25 TWYTLTVPGDSPcaRVGHSCSYLPPVGNakrgKVFIVGGANPNRSFSDVHTMDLETRTWT--TPEVTSPPPSPRTFHtSS 102
Cdd:PLN02153  61 TWSIAPANGDVP--RISCLGVRMVAVGT----KLYIFGGRDEKREFSDFYSYDTVKNEWTflTKLDEEGGPEARTFH-SM 133
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 103 AAIGNQLYVFGGGERGAQPVQDTKLHVFDANTLT---WSQPETLGNPPSPRHGHVMVAAGTKLFIHGGLA------GDRF 173
Cdd:PLN02153 134 ASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIAdgkWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFAtsilpgGKSD 213
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 530390391 174 YDD--LHCIDISDMKWQKLNPTGAAPAGCAAHSAVAMGKHVYIFGG 217
Cdd:PLN02153 214 YESnaVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGG 259
PLN02153 PLN02153
epithiospecifier protein
144-255 5.08e-11

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 62.70  E-value: 5.08e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 144 GNPPSPRHGHVMVAAGTKLFIHGG-LAGDRFYD-DLHCIDISDMKWQKLNPTGAAPA-GCAAHSAVAMGKHVYIFGGMTP 220
Cdd:PLN02153  17 GKGPGPRCSHGIAVVGDKLYSFGGeLKPNEHIDkDLYVFDFNTHTWSIAPANGDVPRiSCLGVRMVAVGTKLYIFGGRDE 96
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 530390391 221 AGALDTMYQYHTEEQHWTLL-KFDTL-LPPGRLDHSM 255
Cdd:PLN02153  97 KREFSDFYSYDTVKNEWTFLtKLDEEgGPEARTFHSM 133
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
136-255 9.64e-11

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 61.33  E-value: 9.64e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 136 TWSqpeTLGNPPSPRHGHVMVAAGTKLFIHGGLAGDRFYDDLHCIDISDMKWQKLNPTGAAPAGCAAhsAVAMGKHVYIF 215
Cdd:COG3055    2 TWS---SLPDLPTPRSEAAAALLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPLPGPPRHHAA--AVAQDGKLYVF 76
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 530390391 216 GGMTPA----GALDTMYQYHTEEQHWTLLkfdTLLPPGRLDHSM 255
Cdd:COG3055   77 GGFTGAnpssTPLNDVYVYDPATNTWTKL---APMPTPRGGATA 117
PRK14131 PRK14131
N-acetylneuraminate epimerase;
102-217 3.90e-09

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 57.33  E-value: 3.90e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 102 SAAIGNQLYVfGGGERGaqpvqdTKLHVFDANTLT--WSQPETLgnPPSPRHGHVMVAAGTKLFIHGGL------AGDRF 173
Cdd:PRK14131  34 GAIDNNTVYV-GLGSAG------TSWYKLDLNAPSkgWTKIAAF--PGGPREQAVAAFIDGKLYVFGGIgktnseGSPQV 104
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 530390391 174 YDDLHCIDISDMKWQKLNPTgaAPAGCAAHSAVAM-GKHVYIFGG 217
Cdd:PRK14131 105 FDDVYKYDPKTNSWQKLDTR--SPVGLAGHVAVSLhNGKAYITGG 147
PHA03098 PHA03098
kelch-like protein; Provisional
58-258 1.08e-07

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 53.23  E-value: 1.08e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  58 VFIVGGANPNR-SFSDVHTMDLETRTWTT-PEVTSPPPSPrtfhtSSAAIGNQLYVFGGgERGAQPVQDTKLHVFDANTl 135
Cdd:PHA03098 297 IYFIGGMNKNNlSVNSVVSYDTKTKSWNKvPELIYPRKNP-----GVTVFNNRIYVIGG-IYNSISLNTVESWKPGESK- 369
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 136 tWSQPETLgnpPSPRHGHVMVAAGTKLFIHGGLA-GDRFYDDLHCIDISDMKWQKLNPTgaaPAGCAAHSAVAMGKHVYI 214
Cdd:PHA03098 370 -WREEPPL---IFPRYNPCVVNVNNLIYVIGGISkNDELLKTVECFSLNTNKWSKGSPL---PISHYGGCAIYHDGKIYV 442
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 530390391 215 FGGMTPA---GALDTMYQYHTEEQHWTLLKfdTLLPPgRLDHSMCII 258
Cdd:PHA03098 443 IGGISYIdniKVYNIVESYNPVTNKWTELS--SLNFP-RINASLCIF 486
PLN02153 PLN02153
epithiospecifier protein
33-250 1.68e-07

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 52.30  E-value: 1.68e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  33 GDSPCARVGHScsyLPPVGNakrgKVFIVGGA-NPNRSF-SDVHTMDLETRTWTTPEVTSPPPSPRTFHTSSAAIGNQLY 110
Cdd:PLN02153  17 GKGPGPRCSHG---IAVVGD----KLYSFGGElKPNEHIdKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLY 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 111 VFGGGErgaQPVQDTKLHVFDANTLTW---SQPETLGNPPSpRHGHVMVAAGTKLFIHGGLAG-------DRFyDDLHCI 180
Cdd:PLN02153  90 IFGGRD---EKREFSDFYSYDTVKNEWtflTKLDEEGGPEA-RTFHSMASDENHVYVFGGVSKgglmktpERF-RTIEAY 164
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 530390391 181 DISDMKWQKL-NPTGAAPAGCAAHSAVAMGKHVYIFGGMT---PAGALD----TMYQYHTEEQHWTLLKFDTLLPPGR 250
Cdd:PLN02153 165 NIADGKWVQLpDPGENFEKRGGAGFAVVQGKIWVVYGFATsilPGGKSDyesnAVQFFDPASGKWTEVETTGAKPSAR 242
Kelch_3 pfam13415
Galactose oxidase, central domain;
106-158 9.13e-07

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 44.97  E-value: 9.13e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 530390391  106 GNQLYVFGGGERGAQPVqDTKLHVFDANTLTWsqpETLGNPPSPRHGHVMVAA 158
Cdd:pfam13415   1 GDKLYIFGGLGFDGQTR-LNDLYVYDLDTNTW---TQIGDLPPPRSGHSATYI 49
Kelch_4 pfam13418
Galactose oxidase, central domain;
38-93 1.57e-06

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 44.53  E-value: 1.57e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 530390391   38 ARVGHSCSYLPpvgnakRGKVFIVGGAN-PNRSFSDVHTMDLETRTWTTpeVTSPPP 93
Cdd:pfam13418   1 PRAYHTSTSIP------DDTIYLFGGEGeDGTLLSDLWVFDLSTNEWTR--LGSLPS 49
PRK14131 PRK14131
N-acetylneuraminate epimerase;
21-229 3.16e-06

N-acetylneuraminate epimerase;


Pssm-ID: 237617 [Multi-domain]  Cd Length: 376  Bit Score: 48.47  E-value: 3.16e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  21 PRKATWYTLtvPGDSPCARVGHScSYLPpvgnaKRGKVFIVGGANP---NRSFSDVHT---------------MDLETRT 82
Cdd:PRK14131 113 PKTNSWQKL--DTRSPVGLAGHV-AVSL-----HNGKAYITGGVNKnifDGYFEDLAAagkdktpkdkindayFDKKPED 184
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  83 WT-TPEVTSPPPSPRTFH---------TSSAAI---GNQLYVFGG----GERGAQpvqdTKLHVFDANTLTWSQPETLgn 145
Cdd:PRK14131 185 YFfNKEVLSYDPSTNQWKnagespflgTAGSAVvikGNKLWLINGeikpGLRTDA----VKQGKFTGNNLKWQKLPDL-- 258
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391 146 PPSPR---------------HGHVMVAAGT------------KLFIHGGLAgDRFYDDLHCIDisDMKWQKLnptGAAPA 198
Cdd:PRK14131 259 PPAPGgssqegvagafagysNGVLLVAGGAnfpgarenyqngKLYAHEGLK-KSWSDEIYALV--NGKWQKV---GELPQ 332
                        250       260       270
                 ....*....|....*....|....*....|..
gi 530390391 199 GCAAHSAVAMGKHVYIFGGMTPAG-ALDTMYQ 229
Cdd:PRK14131 333 GLAYGVSVSWNNGVLLIGGETAGGkAVSDVTL 364
Kelch_6 pfam13964
Kelch motif;
95-150 4.58e-06

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 43.09  E-value: 4.58e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 530390391   95 PRTFHtSSAAIGNQLYVFGGGERGAQPVQdtKLHVFDANTLTWsqpETLGNPPSPR 150
Cdd:pfam13964   1 PRTFH-SVVSVGGYIYVFGGYTNASPALN--KLEVYNPLTKSW---EELPPLPTPR 50
Kelch_3 pfam13415
Galactose oxidase, central domain;
55-104 1.46e-05

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 41.89  E-value: 1.46e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 530390391   55 RGKVFIVGGANPNRS--FSDVHTMDLETRTWTTpevTSPPPSPRTFHTSSAA 104
Cdd:pfam13415   1 GDKLYIFGGLGFDGQtrLNDLYVYDLDTNTWTQ---IGDLPPPRSGHSATYI 49
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
200-240 1.89e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 41.44  E-value: 1.89e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 530390391  200 CAAHSAVAMGKHVYIFGGMTPAGALDTMYQYHTEEQHWTLL 240
Cdd:pfam01344   2 RSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKL 42
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
28-131 8.36e-05

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 43.61  E-value: 8.36e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  28 TLTVPGDSPCARVGHSCSYLppvgnakRGKVFIVGGANpnRSFSDVHTMDLETRTWTTpevTSPPPSPRTFHTSsAAIGN 107
Cdd:COG3055  186 TWTTLAPLPTARAGHAAAVL-------GGKILVFGGES--GFSDEVEAYDPATNTWTA---LGELPTPRHGHAA-VLTDG 252
                         90       100
                 ....*....|....*....|....*
gi 530390391 108 QLYVFGGG-ERGAQPVQDTKLHVFD 131
Cdd:COG3055  253 KVYVIGGEtKPGVRTPLVTSAEVYD 277
Kelch_4 pfam13418
Galactose oxidase, central domain;
95-148 9.96e-05

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 39.52  E-value: 9.96e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 530390391   95 PRTFHTSSAAIGNQLYVFGGgeRGAQPVQDTKLHVFDANTLTWSQpetLGNPPS 148
Cdd:pfam13418   1 PRAYHTSTSIPDDTIYLFGG--EGEDGTLLSDLWVFDLSTNEWTR---LGSLPS 49
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
149-192 1.15e-04

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 39.13  E-value: 1.15e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 530390391  149 PRHGHVMVAAGTKLFIHGGLAGDRFYDDLHCIDISDMKWQKLNP 192
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPS 44
Kelch_4 pfam13418
Galactose oxidase, central domain;
149-190 3.27e-04

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 37.98  E-value: 3.27e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 530390391  149 PRHGHVMVA-AGTKLFIHGGLAGD-RFYDDLHCIDISDMKWQKL 190
Cdd:pfam13418   1 PRAYHTSTSiPDDTIYLFGGEGEDgTLLSDLWVFDLSTNEWTRL 44
Kelch_5 pfam13854
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
147-178 4.24e-04

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 433528 [Multi-domain]  Cd Length: 41  Bit Score: 37.54  E-value: 4.24e-04
                          10        20        30
                  ....*....|....*....|....*....|....
gi 530390391  147 PSPRHGHVMVAAGTKLFIHGGLAGDR--FYDDLH 178
Cdd:pfam13854   1 PVPRYGHCAVTVGDYIYLYGGYTGGEgqPSDDVY 34
PLN02772 PLN02772
guanylate kinase
101-171 7.21e-04

guanylate kinase


Pssm-ID: 215414 [Multi-domain]  Cd Length: 398  Bit Score: 40.98  E-value: 7.21e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530390391 101 SSAAIGNQLYVFGGGERGAQPVQDTKLhvFDANTLTWSQPETLGNPPSPRHGH--VMVAAGTKLFIHGGLAGD 171
Cdd:PLN02772  29 TSVTIGDKTYVIGGNHEGNTLSIGVQI--LDKITNNWVSPIVLGTGPKPCKGYsaVVLNKDRILVIKKGSAPD 99
PLN02153 PLN02153
epithiospecifier protein
26-178 9.77e-04

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 40.35  E-value: 9.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  26 WYTLTVPGDSPCARVGHSCSYLppvgnakRGKVFIV---------GGANPNRSfSDVHTMDLETRTWTTPEVTSPPPSPR 96
Cdd:PLN02153 171 WVQLPDPGENFEKRGGAGFAVV-------QGKIWVVygfatsilpGGKSDYES-NAVQFFDPASGKWTEVETTGAKPSAR 242
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530390391  97 TFHtSSAAIGNQLYVFGG-------GERGAQPVQDTKlHVFDANTLTWSQPETLGNPPSPRHGHVMVAA---GTK-LFIH 165
Cdd:PLN02153 243 SVF-AHAVVGKYIIIFGGevwpdlkGHLGPGTLSNEG-YALDTETLVWEKLGECGEPAMPRGWTAYTTAtvyGKNgLLMH 320
                        170
                 ....*....|....
gi 530390391 166 GG-LAGDRFYDDLH 178
Cdd:PLN02153 321 GGkLPTNERTDDLY 334
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
38-84 2.47e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 35.28  E-value: 2.47e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 530390391   38 ARVGHSCSYLppvgnakRGKVFIVGGANPNRSFSDVHTMDLETRTWT 84
Cdd:pfam01344   1 RRSGAGVVVV-------GGKIYVIGGFDGNQSLNSVEVYDPETNTWS 40
Kelch_2 pfam07646
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
39-84 3.87e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 462220 [Multi-domain]  Cd Length: 47  Bit Score: 35.00  E-value: 3.87e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 530390391   39 RVGHSCSYLppvgnakRGKVFIVGGA--NPNRSFSDVHTMDLETRTWT 84
Cdd:pfam07646   2 RYPHASSVP-------GGKLYVVGGSdgLGDLSSSDVLVYDPETNVWT 42
Kelch_5 pfam13854
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
197-233 7.38e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 433528 [Multi-domain]  Cd Length: 41  Bit Score: 33.69  E-value: 7.38e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 530390391  197 PAGCAAHSAVAMGKHVYIFGGMTPAG--ALDTMYQYHTE 233
Cdd:pfam13854   1 PVPRYGHCAVTVGDYIYLYGGYTGGEgqPSDDVYVLSLP 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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