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Conserved domains on  [gi|14165272|ref|NP_115785|]
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serine/threonine-protein kinase PINK1, mitochondrial precursor [Homo sapiens]

Protein Classification

serine/threonine-protein kinase PINK1( domain architecture ID 10197102)

serine/threonine-protein kinase PINK1 (Pten INduced Kinase 1) catalyzes the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates; it plays an important role in maintaining mitochondrial homeostasis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
STKc_PINK1 cd14018
Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze ...
162-512 0e+00

Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PINK1 contains an N-terminal mitochondrial targeting sequence, a catalytic domain, and a C-terminal regulatory region. It plays an important role in maintaining mitochondrial homeostasis. It protects cells against oxidative stress-induced apoptosis by phosphorylating the chaperone TNFR-associated protein 1 (TRAP1), also called Hsp75. Phosphorylated TRAP1 prevents cytochrome c release and peroxide-induced apoptosis. PINK1 interacts with Omi/HtrA2, a serine protease, and Parkin, an E3 ubiquitin ligase, in different pathways to promote mitochondrial health. The parkin gene is the most commonly mutated gene in autosomal recessive familial parkinsonism. Mutations within the catalytic domain of PINK1 are also associated with Parkinson's disease. The PINK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


:

Pssm-ID: 270920 [Multi-domain]  Cd Length: 313  Bit Score: 562.12  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 162 IGKGCSAAVYEATMptlpqnlevtkstgllpgrgpgtsapgegqerapgapaFPLAIKMMWNISAGSSSEAILNTMSQEL 241
Cdd:cd14018   1 IGKGCNAAVYEAAL--------------------------------------FPLAIKMMWNISAGSSSEAILRSMGNEL 42
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 242 VPASRVALAGEYGAVTYRKSKRGPKQLAPHPNIIRVLRAFTSSVPLLPGALVDYPDVLPSRLHPEGLGHGRTLFLVMKNY 321
Cdd:cd14018  43 VPAPNVALLGEYGEVTRLGLQNGRKLLAPHPNIIRVQRAFTDSVPLLPGAIEDYPDVLPARLNPSGLGHNRTLFLVMKNY 122
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 322 PCTLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGCCLADESIGLQLPFS 401
Cdd:cd14018 123 PCTLRQYLWVNTPSYRLARVMILQLLEGVDHLVRHGIAHRDLKSDNILLELDFDGCPWLVIADFGCCLADDSIGLQLPFS 202
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 402 SWYVDRGGNGCLMAPEVSTARPGPRAVIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPPD 481
Cdd:cd14018 203 SWYVDRGGNACLMAPEVSTAVPGPGVVINYSKADAWAVGAIAYEIFGLSNPFYGLGDTMLESRSYQESQLPALPSAVPPD 282
                       330       340       350
                ....*....|....*....|....*....|.
gi 14165272 482 VRQLVRALLQREASKRPSARVAANVLHLSLW 512
Cdd:cd14018 283 VRQVVKDLLQRDPNKRVSARVAANVLHLSLW 313
 
Name Accession Description Interval E-value
STKc_PINK1 cd14018
Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze ...
162-512 0e+00

Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PINK1 contains an N-terminal mitochondrial targeting sequence, a catalytic domain, and a C-terminal regulatory region. It plays an important role in maintaining mitochondrial homeostasis. It protects cells against oxidative stress-induced apoptosis by phosphorylating the chaperone TNFR-associated protein 1 (TRAP1), also called Hsp75. Phosphorylated TRAP1 prevents cytochrome c release and peroxide-induced apoptosis. PINK1 interacts with Omi/HtrA2, a serine protease, and Parkin, an E3 ubiquitin ligase, in different pathways to promote mitochondrial health. The parkin gene is the most commonly mutated gene in autosomal recessive familial parkinsonism. Mutations within the catalytic domain of PINK1 are also associated with Parkinson's disease. The PINK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270920 [Multi-domain]  Cd Length: 313  Bit Score: 562.12  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 162 IGKGCSAAVYEATMptlpqnlevtkstgllpgrgpgtsapgegqerapgapaFPLAIKMMWNISAGSSSEAILNTMSQEL 241
Cdd:cd14018   1 IGKGCNAAVYEAAL--------------------------------------FPLAIKMMWNISAGSSSEAILRSMGNEL 42
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 242 VPASRVALAGEYGAVTYRKSKRGPKQLAPHPNIIRVLRAFTSSVPLLPGALVDYPDVLPSRLHPEGLGHGRTLFLVMKNY 321
Cdd:cd14018  43 VPAPNVALLGEYGEVTRLGLQNGRKLLAPHPNIIRVQRAFTDSVPLLPGAIEDYPDVLPARLNPSGLGHNRTLFLVMKNY 122
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 322 PCTLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGCCLADESIGLQLPFS 401
Cdd:cd14018 123 PCTLRQYLWVNTPSYRLARVMILQLLEGVDHLVRHGIAHRDLKSDNILLELDFDGCPWLVIADFGCCLADDSIGLQLPFS 202
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 402 SWYVDRGGNGCLMAPEVSTARPGPRAVIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPPD 481
Cdd:cd14018 203 SWYVDRGGNACLMAPEVSTAVPGPGVVINYSKADAWAVGAIAYEIFGLSNPFYGLGDTMLESRSYQESQLPALPSAVPPD 282
                       330       340       350
                ....*....|....*....|....*....|.
gi 14165272 482 VRQLVRALLQREASKRPSARVAANVLHLSLW 512
Cdd:cd14018 283 VRQVVKDLLQRDPNKRVSARVAANVLHLSLW 313
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
271-501 2.42e-23

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 99.53  E-value: 2.42e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    271 HPNIIRVLRAFTSSVPLLpgaLV-DYPDvlpsrlhpeglghGRTLFLVMKNY----PCTLRQYLCvntpsprlaammllQ 345
Cdd:smart00220  56 HPNIVRLYDVFEDEDKLY---LVmEYCE-------------GGDLFDLLKKRgrlsEDEARFYLR--------------Q 105
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    346 LLEGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCCLADESIGLQLPF--SSWYvdrggngclMAPEVSTARP 423
Cdd:smart00220 106 ILSALEYLHSKGIVHRDLKPENIL--LDEDGH--VKLADFGLARQLDPGEKLTTFvgTPEY---------MAPEVLLGKG 172
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    424 gpravidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPES--VPPDVRQLVRALLQREASKRPSA 500
Cdd:smart00220 173 -------YGkAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEwdISPEAKDLIRKLLVKDPEKRLTA 245

                   .
gi 14165272    501 R 501
Cdd:smart00220 246 E 246
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
271-508 1.41e-13

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 73.12  E-value: 1.41e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTssvpllpgalvdypdvlpsrlhpeglgHGRTLFLVMKNYP-CTLRQYLCVNTP-SPRLAAMMLLQLLE 348
Cdd:COG0515  66 HPNIVRVYDVGE---------------------------EDGRPYLVMEYVEgESLADLLRRRGPlPPAEALRILAQLAE 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVelDPDGCPwlVIADFGCCLADESIGLQLPFSSW----YvdrggngclMAPE-VSTARP 423
Cdd:COG0515 119 ALAAAHAAGIVHRDIKPANILL--TPDGRV--KLIDFGIARALGGATLTQTGTVVgtpgY---------MAPEqARGEPV 185
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 GPRavidyskADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLP--ALPESVPPDVRQLVRALLQREASKRP-SA 500
Cdd:COG0515 186 DPR-------SDVYSLGVTLYELLTGRPPFDGDSPAELLRAHLREPPPPpsELRPDLPPALDAIVLRALAKDPEERYqSA 258

                ....*...
gi 14165272 501 RVAANVLH 508
Cdd:COG0515 259 AELAAALR 266
PTZ00283 PTZ00283
serine/threonine protein kinase; Provisional
350-505 7.14e-10

serine/threonine protein kinase; Provisional


Pssm-ID: 240344 [Multi-domain]  Cd Length: 496  Bit Score: 61.42  E-value: 7.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  350 VDHLVQQGIAHRDLKSDNILveLDPDGcpwLV-IADFGccladesiglqlpFSSWYV-----DRGGNGC----LMAPEVS 419
Cdd:PTZ00283 156 VHHVHSKHMIHRDIKSANIL--LCSNG---LVkLGDFG-------------FSKMYAatvsdDVGRTFCgtpyYVAPEIW 217
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  420 TARPgpravidYSK-ADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQeAQLPALPESVPPDVRQLVRALLQREASKRP 498
Cdd:PTZ00283 218 RRKP-------YSKkADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA-GRYDPLPPSISPEMQEIVTALLSSDPKRRP 289

                 ....*..
gi 14165272  499 SARVAAN 505
Cdd:PTZ00283 290 SSSKLLN 296
PK_Tyr_Ser-Thr pfam07714
Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role ...
348-501 4.59e-08

Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyze the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyze the reverse process. Protein kinases fall into three broad classes, characterized with respect to substrate specificity; Serine/threonine-protein kinases, tyrosine-protein kinases, and dual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins). This entry represents the catalytic domain found in a number of serine/threonine- and tyrosine-protein kinases. It does not include the catalytic domain of dual specificity kinases.


Pssm-ID: 462242 [Multi-domain]  Cd Length: 258  Bit Score: 54.42  E-value: 4.59e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272   348 EGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLV-IADFGccLADesigLQLPFSSWYVDRGGNGCL--MAPEvstarpg 424
Cdd:pfam07714 113 KGMEYLESKNFVHRDLAARNCLVSENL-----VVkISDFG--LSR----DIYDDDYYRKRGGGKLPIkwMAPE------- 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272   425 praVIDY----SKADAWAVGAIAYEIFGL-VNPFYGQGKAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRPS 499
Cdd:pfam07714 175 ---SLKDgkftSKSDVWSFGVLLWEIFTLgEQPYPGMSNEEVLEFLEDGYRLPQ-PENCPDELYDLMKQCWAYDPEDRPT 250

                  ..
gi 14165272   500 AR 501
Cdd:pfam07714 251 FS 252
 
Name Accession Description Interval E-value
STKc_PINK1 cd14018
Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze ...
162-512 0e+00

Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PINK1 contains an N-terminal mitochondrial targeting sequence, a catalytic domain, and a C-terminal regulatory region. It plays an important role in maintaining mitochondrial homeostasis. It protects cells against oxidative stress-induced apoptosis by phosphorylating the chaperone TNFR-associated protein 1 (TRAP1), also called Hsp75. Phosphorylated TRAP1 prevents cytochrome c release and peroxide-induced apoptosis. PINK1 interacts with Omi/HtrA2, a serine protease, and Parkin, an E3 ubiquitin ligase, in different pathways to promote mitochondrial health. The parkin gene is the most commonly mutated gene in autosomal recessive familial parkinsonism. Mutations within the catalytic domain of PINK1 are also associated with Parkinson's disease. The PINK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270920 [Multi-domain]  Cd Length: 313  Bit Score: 562.12  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 162 IGKGCSAAVYEATMptlpqnlevtkstgllpgrgpgtsapgegqerapgapaFPLAIKMMWNISAGSSSEAILNTMSQEL 241
Cdd:cd14018   1 IGKGCNAAVYEAAL--------------------------------------FPLAIKMMWNISAGSSSEAILRSMGNEL 42
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 242 VPASRVALAGEYGAVTYRKSKRGPKQLAPHPNIIRVLRAFTSSVPLLPGALVDYPDVLPSRLHPEGLGHGRTLFLVMKNY 321
Cdd:cd14018  43 VPAPNVALLGEYGEVTRLGLQNGRKLLAPHPNIIRVQRAFTDSVPLLPGAIEDYPDVLPARLNPSGLGHNRTLFLVMKNY 122
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 322 PCTLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGCCLADESIGLQLPFS 401
Cdd:cd14018 123 PCTLRQYLWVNTPSYRLARVMILQLLEGVDHLVRHGIAHRDLKSDNILLELDFDGCPWLVIADFGCCLADDSIGLQLPFS 202
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 402 SWYVDRGGNGCLMAPEVSTARPGPRAVIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPPD 481
Cdd:cd14018 203 SWYVDRGGNACLMAPEVSTAVPGPGVVINYSKADAWAVGAIAYEIFGLSNPFYGLGDTMLESRSYQESQLPALPSAVPPD 282
                       330       340       350
                ....*....|....*....|....*....|.
gi 14165272 482 VRQLVRALLQREASKRPSARVAANVLHLSLW 512
Cdd:cd14018 283 VRQVVKDLLQRDPNKRVSARVAANVLHLSLW 313
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
271-501 2.42e-23

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 99.53  E-value: 2.42e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    271 HPNIIRVLRAFTSSVPLLpgaLV-DYPDvlpsrlhpeglghGRTLFLVMKNY----PCTLRQYLCvntpsprlaammllQ 345
Cdd:smart00220  56 HPNIVRLYDVFEDEDKLY---LVmEYCE-------------GGDLFDLLKKRgrlsEDEARFYLR--------------Q 105
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    346 LLEGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCCLADESIGLQLPF--SSWYvdrggngclMAPEVSTARP 423
Cdd:smart00220 106 ILSALEYLHSKGIVHRDLKPENIL--LDEDGH--VKLADFGLARQLDPGEKLTTFvgTPEY---------MAPEVLLGKG 172
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    424 gpravidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPES--VPPDVRQLVRALLQREASKRPSA 500
Cdd:smart00220 173 -------YGkAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEwdISPEAKDLIRKLLVKDPEKRLTA 245

                   .
gi 14165272    501 R 501
Cdd:smart00220 246 E 246
PKc cd00180
Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group ...
271-501 5.27e-20

Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. PKs make up a large family of serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and more than 500 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase.


Pssm-ID: 270622 [Multi-domain]  Cd Length: 215  Bit Score: 88.87  E-value: 5.27e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTSsvpllpgalvdypdvlpsrlhpeglghGRTLFLVMKNYP-CTLRQYLCVN--TPSPRLAAMMLLQLL 347
Cdd:cd00180  50 HPNIVKLYDVFET---------------------------ENFLYLVMEYCEgGSLKDLLKENkgPLSEEEALSILRQLL 102
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeldpDGCPWLVIADFGCCLADESIGLQLPFSSWyvdrGGNGCLMAPEVSTARPgpra 427
Cdd:cd00180 103 SALEYLHSNGIIHRDLKPENILL----DSDGTVKLADFGLAKDLDSDDSLLKTTGG----TTPPYYAPPELLGGRY---- 170
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 428 viDYSKADAWAVGAIAYEIfglvnpfygqgkahlesrsyqeaqlpalpesvpPDVRQLVRALLQREASKRPSAR 501
Cdd:cd00180 171 --YGPKVDIWSLGVILYEL---------------------------------EELKDLIRRMLQYDPKKRPSAK 209
STKc_MAPKKK cd06606
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase ...
348-501 2.56e-19

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270783 [Multi-domain]  Cd Length: 258  Bit Score: 87.96  E-value: 2.56e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVelDPDGCpwLVIADFGCCLADESIGLQLPFSS------WyvdrggngclMAPEV-ST 420
Cdd:cd06606 110 EGLEYLHSNGIVHRDIKGANILV--DSDGV--VKLADFGCAKRLAEIATGEGTKSlrgtpyW----------MAPEViRG 175
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 421 ARPGPravidysKADAWAVGAIAYEIFGLVNPFYGQGK-AHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd06606 176 EGYGR-------AADIWSLGCTVIEMATGKPPWSELGNpVAALFKIGSSGEPPPIPEHLSEEAKDFLRKCLQRDPKKRPT 248

                ..
gi 14165272 500 AR 501
Cdd:cd06606 249 AD 250
STKc_AGC cd05123
Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
349-503 9.98e-18

Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. The AGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase.


Pssm-ID: 270693 [Multi-domain]  Cd Length: 250  Bit Score: 82.95  E-value: 9.98e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccLADESIglqlpfsswyvdRGGNGC--------LMAPEVST 420
Cdd:cd05123 105 ALEYLHSLGIIYRDLKPENIL--LDSDG--HIKLTDFG--LAKELS------------SDGDRTytfcgtpeYLAPEVLL 166
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 421 ARPgpravidYSKA-DAWAVGAIAYE-IFGLVnPFYGQGKAHLEsRSYQEAQLpALPESVPPDVRQLVRALLQREASKRP 498
Cdd:cd05123 167 GKG-------YGKAvDWWSLGVLLYEmLTGKP-PFYAENRKEIY-EKILKSPL-KFPEYVSPEAKSLISGLLQKDPTKRL 236

                ....*
gi 14165272 499 SARVA 503
Cdd:cd05123 237 GSGGA 241
STKc_MAP3K-like cd13999
Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine ...
349-499 4.21e-17

Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed mainly of MAP3Ks and similar proteins, including TGF-beta Activated Kinase-1 (TAK1, also called MAP3K7), MAP3K12, MAP3K13, Mixed lineage kinase (MLK), MLK-Like mitogen-activated protein Triple Kinase (MLTK), and Raf (Rapidly Accelerated Fibrosarcoma) kinases. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Also included in this subfamily is the pseudokinase Kinase Suppressor of Ras (KSR), which is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway.


Pssm-ID: 270901 [Multi-domain]  Cd Length: 245  Bit Score: 81.04  E-value: 4.21e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFG-CCLADESIGLQLpfsswyvDRGGNGCLMAPEVSTARPgpra 427
Cdd:cd13999 103 GMNYLHSPPIIHRDLKSLNIL--LDENFT--VKIADFGlSRIKNSTTEKMT-------GVVGTPRWMAPEVLRGEP---- 167
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 428 vidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd13999 168 ---YTeKADVYSFGIVLWELLTGEVPFKELSPIQIAAAVVQKGLRPPIPPDCPPELSKLIKRCWNEDPEKRPS 237
STKc_PknB_like cd14014
Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs ...
271-508 6.26e-17

Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270916 [Multi-domain]  Cd Length: 260  Bit Score: 80.71  E-value: 6.26e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTssvpllpgalvdypdvlpsrlhpeglgHGRTLFLVMKNYP-CTLRQYLCVNTP-SPRLAAMMLLQLLE 348
Cdd:cd14014  59 HPNIVRVYDVGE---------------------------DDGRPYIVMEYVEgGSLADLLRERGPlPPREALRILAQIAD 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGLQlpfsswyvdRGGNGCL----MAPE-VSTARP 423
Cdd:cd14014 112 ALAAAHRAGIVHRDIKPANIL--LTEDG--RVKLTDFGIARALGDSGLT---------QTGSVLGtpayMAPEqARGGPV 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 GPRavidyskADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEA--QLPALPESVPPDVRQLVRALLQREASKRP-SA 500
Cdd:cd14014 179 DPR-------SDIYSLGVVLYELLTGRPPFDGDSPAAVLAKHLQEAppPPSPLNPDVPPALDAIILRALAKDPEERPqSA 251

                ....*...
gi 14165272 501 RVAANVLH 508
Cdd:cd14014 252 AELLAALR 259
STKc_Yank1 cd05578
Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the ...
349-497 3.84e-16

Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily contains uncharacterized STKs with similarity to the human protein designated as Yank1 or STK32A. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270730 [Multi-domain]  Cd Length: 257  Bit Score: 78.45  E-value: 3.84e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEVSTARpgprav 428
Cdd:cd05578 112 ALDYLHSKNIIHRDIKPDNIL--LDEQG--HVHITDFN-------IATKLTDGTLATSTSGTKPYMAPEVFMRA------ 174
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 429 iDYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLES-RSYQEAQLPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05578 175 -GYSFAvDWWSLGVTAYEMLRGKRPYEIHSRTSIEEiRAKFETASVLYPAGWSEEAIDLINKLLERDPQKR 244
STKc_Nek cd08215
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; ...
349-501 5.23e-16

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270855 [Multi-domain]  Cd Length: 258  Bit Score: 78.27  E-value: 5.23e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccladesIGLQL----PFSSWYVdrgGNGCLMAPEVSTARPg 424
Cdd:cd08215 115 ALKYLHSRKILHRDLKTQNIF--LTKDGV--VKLGDFG-------ISKVLesttDLAKTVV---GTPYYLSPELCENKP- 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pravidYS-KADAWAVGAIAYEIFGLVNPFYGQgkaHLESRSYQ--EAQLPALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd08215 180 ------YNyKSDIWALGCVLYELCTLKHPFEAN---NLPALVYKivKGQYPPIPSQYSSELRDLVNSMLQKDPEKRPSAN 250
STKc_Aurora cd14007
Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of ...
348-505 4.54e-15

Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Yeast contains only one Aurora kinase while most higher eukaryotes have two. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2. Aurora-B is most active at the transition during metaphase to the end of mitosis. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270909 [Multi-domain]  Cd Length: 253  Bit Score: 75.20  E-value: 4.54e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccladesiglqlpfssWYVDRGGNGCL--------MAPEVS 419
Cdd:cd14007 111 LALDYLHSKNIIHRDIKPENIL--LGSNGE--LKLADFG----------------WSVHAPSNRRKtfcgtldyLPPEMV 170
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 420 TARPgpravIDYsKADAWAVGAIAYEIFglvnpfygQGKAHLESRSYQEAQ------LPALPESVPPDVRQLVRALLQRE 493
Cdd:cd14007 171 EGKE-----YDY-KVDIWSLGVLCYELL--------VGKPPFESKSHQETYkriqnvDIKFPSSVSPEAKDLISKLLQKD 236
                       170
                ....*....|..
gi 14165272 494 ASKRPSARVAAN 505
Cdd:cd14007 237 PSKRLSLEQVLN 248
STKc_CAMK cd05117
The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of ...
348-501 1.44e-14

The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. CAMKIV is implicated in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors, as well as in T-cell development and signaling. The CAMK family also consists of other related kinases including the Phosphorylase kinase Gamma subunit (PhKG), the C-terminal kinase domains of Ribosomal S6 kinase (RSK) and Mitogen and stress-activated kinase (MSK), Doublecortin-like kinase (DCKL), and the MAPK-activated protein kinases MK2, MK3, and MK5, among others. The CAMK family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270687 [Multi-domain]  Cd Length: 258  Bit Score: 73.66  E-value: 1.44e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVElDPDGCPWLVIADFGccLA---DESIGLQLPFSSWYvdrggngcLMAPEVSTARPg 424
Cdd:cd05117 110 SAVAYLHSQGIVHRDLKPENILLA-SKDPDSPIKIIDFG--LAkifEEGEKLKTVCGTPY--------YVAPEVLKGKG- 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pravidYSKA-DAWAVGAIAYEIFGLVNPFYG-----------QGKAHLESRSYQeaqlpalpeSVPPDVRQLVRALLQR 492
Cdd:cd05117 178 ------YGKKcDIWSLGVILYILLCGYPPFYGeteqelfekilKGKYSFDSPEWK---------NVSEEAKDLIKRLLVV 242

                ....*....
gi 14165272 493 EASKRPSAR 501
Cdd:cd05117 243 DPKKRLTAA 251
STKc_AMPK-like cd14003
Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze ...
348-499 2.76e-14

Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AMPK-like subfamily is composed of AMPK, MARK, BRSK, NUAK, MELK, SNRK, TSSK, and SIK, among others. LKB1 serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. BRSKs play important roles in establishing neuronal polarity. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. The AMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270905 [Multi-domain]  Cd Length: 252  Bit Score: 72.94  E-value: 2.76e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccladesiglqlpFSSWYvdRGGNG--------CLMAPEVS 419
Cdd:cd14003 110 SAVDYCHSNGIVHRDLKLENIL--LDKNGN--LKIIDFG-------------LSNEF--RGGSLlktfcgtpAYAAPEVL 170
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 420 TARP--GPravidysKADAWAVGAIAYEI-FGLVnPFYGQGKAHLESRSYQEaQLPaLPESVPPDVRQLVRALLQREASK 496
Cdd:cd14003 171 LGRKydGP-------KADVWSLGVILYAMlTGYL-PFDDDNDSKLFRKILKG-KYP-IPSHLSPDARDLIRRMLVVDPSK 240

                ...
gi 14165272 497 RPS 499
Cdd:cd14003 241 RIT 243
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
271-508 1.41e-13

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 73.12  E-value: 1.41e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTssvpllpgalvdypdvlpsrlhpeglgHGRTLFLVMKNYP-CTLRQYLCVNTP-SPRLAAMMLLQLLE 348
Cdd:COG0515  66 HPNIVRVYDVGE---------------------------EDGRPYLVMEYVEgESLADLLRRRGPlPPAEALRILAQLAE 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVelDPDGCPwlVIADFGCCLADESIGLQLPFSSW----YvdrggngclMAPE-VSTARP 423
Cdd:COG0515 119 ALAAAHAAGIVHRDIKPANILL--TPDGRV--KLIDFGIARALGGATLTQTGTVVgtpgY---------MAPEqARGEPV 185
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 GPRavidyskADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLP--ALPESVPPDVRQLVRALLQREASKRP-SA 500
Cdd:COG0515 186 DPR-------SDVYSLGVTLYELLTGRPPFDGDSPAELLRAHLREPPPPpsELRPDLPPALDAIVLRALAKDPEERYqSA 258

                ....*...
gi 14165272 501 RVAANVLH 508
Cdd:COG0515 259 AELAAALR 266
STKc_ATG1_ULK_like cd14009
Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like ...
353-497 5.48e-13

Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes yeast ATG1 and metazoan homologs including vertebrate ULK1-3. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. It is involved in nutrient sensing and signaling, the assembly of autophagy factors and the execution of autophagy. In metazoans, ATG1 homologs display additional functions. Unc-51 and ULKs have been implicated in neuronal and axonal development. The ATG1/ULK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270911 [Multi-domain]  Cd Length: 251  Bit Score: 69.17  E-value: 5.48e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 353 LVQQGIAHRDLKSDNILVeLDPDGCPWLVIADFGCC--LADESIGLQLPFSSWYvdrggngclMAPEVSTARpgpraviD 430
Cdd:cd14009 108 LRSKNIIHRDLKPQNLLL-STSGDDPVLKIADFGFArsLQPASMAETLCGSPLY---------MAPEILQFQ-------K 170
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 431 Y-SKADAWAVGAIAYE-IFGLVnPFygQGKAHLE-----SRSYQEAQLPaLPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14009 171 YdAKADLWSVGAILFEmLVGKP-PF--RGSNHVQllrniERSDAVIPFP-IAAQLSPDCKDLLRRLLRRDPAER 240
STKc_Nek11 cd08222
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
349-500 7.43e-13

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 11; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270861 [Multi-domain]  Cd Length: 260  Bit Score: 68.99  E-value: 7.43e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDpdgcpWLVIADFG-CCLADESIGLQLPFSswyvdrgGNGCLMAPEVSTARpgpra 427
Cdd:cd08222 118 AVQYMHERRILHRDLKAKNIFLKNN-----VIKVGDFGiSRILMGTSDLATTFT-------GTPYYMSPEVLKHE----- 180
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 428 viDY-SKADAWAVGAIAYEIFGLVNPFYGQGkahLESRSYQ--EAQLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd08222 181 --GYnSKSDIWSLGCILYEMCCLKHAFDGQN---LLSVMYKivEGETPSLPDKYSKELNAIYSRMLNKDPALRPSA 251
STKc_MLCK-like cd14006
Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs ...
348-500 8.38e-13

Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This family is composed of MLCKs and related MLCK-like kinase domains from giant STKs such as titin, obscurin, SPEG, Unc-89, Trio, kalirin, and Twitchin. Also included in this family are Death-Associated Protein Kinases (DAPKs) and Death-associated protein kinase-Related Apoptosis-inducing protein Kinase (DRAKs). MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. Titin, obscurin, Twitchin, and SPEG are muscle proteins involved in the contractile apparatus. The giant STKs are multidomain proteins containing immunoglobulin (Ig), fibronectin type III (FN3), SH3, RhoGEF, PH and kinase domains. Titin, obscurin, Twitchin, and SPEG contain many Ig domain repeats at the N-terminus, while Trio and Kalirin contain spectrin-like repeats. The MLCK-like family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270908 [Multi-domain]  Cd Length: 247  Bit Score: 68.45  E-value: 8.38e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcPWLVIADFGccLA-----DESIGLQLpfsswyvdrgGNGCLMAPEvstar 422
Cdd:cd14006 100 EGLQYLHNHHILHLDLKPENILLADRPS--PQIKIIDFG--LArklnpGEELKEIF----------GTPEFVAPE----- 160
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 pgpraVIDYS----KADAWAVGAIAYEIFGLVNPFYGQGKAHLES--RSYQEAQLPALPESVPPDVRQLVRALLQREASK 496
Cdd:cd14006 161 -----IVNGEpvslATDMWSIGVLTYVLLSGLSPFLGEDDQETLAniSACRVDFSEEYFSSVSQEAKDFIRKLLVKEPRK 235

                ....
gi 14165272 497 RPSA 500
Cdd:cd14006 236 RPTA 239
STKc_Nek2 cd08217
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
355-500 1.15e-12

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Nek2 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. It The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270857 [Multi-domain]  Cd Length: 265  Bit Score: 68.34  E-value: 1.15e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 355 QQGIAHRDLKSDNILveLDPDGCPWLviADFGCC--LADESIglqlpFSSWYVdrgGNGCLMAPEVSTARPgpravidYS 432
Cdd:cd08217 128 GGKILHRDLKPANIF--LDSDNNVKL--GDFGLArvLSHDSS-----FAKTYV---GTPYYMSPELLNEQS-------YD 188
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 433 -KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRsYQEAQLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd08217 189 eKSDIWSLGCLIYELCALHPPFQAANQLELAKK-IKEGKFPRIPSRYSSELNEVIKSMLNVDPDKRPSV 256
STKc_CNK2-like cd08530
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar ...
348-499 1.88e-12

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. This subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270869 [Multi-domain]  Cd Length: 256  Bit Score: 67.42  E-value: 1.88e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDgcpWLVIADFGCC------LADESIglqlpfsswyvdrgGNGCLMAPEVSTA 421
Cdd:cd08530 114 RGLKALHDQKILHRDLKSANILL-SAGD---LVKIGDLGISkvlkknLAKTQI--------------GTPLYAAPEVWKG 175
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 422 RPgpravidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLeSRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd08530 176 RP-------YDyKSDIWSLGCLLYEMATFRPPFEARTMQEL-RYKVCRGKFPPIPPVYSQDLQQIIRSLLQVNPKKRPS 246
STKc_ULK1_2-like cd14120
Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar ...
356-497 2.02e-12

Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. ULK2 is ubiquitously expressed and is essential in autophagy induction. ULK1 and ULK2 have unique and cell-type specific roles, but also display partially redundant roles in starvation-induced autophagy. They both display neuron-specific functions: ULK1 is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, and axon branching; ULK2 plays a role in axon development. The ULK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271022 [Multi-domain]  Cd Length: 256  Bit Score: 67.39  E-value: 2.02e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 356 QGIAHRDLKSDNILVELDPDGCP-----WLVIADFGCC--LADESIGLQLPFSSWYvdrggngclMAPEVSTARpgprav 428
Cdd:cd14120 111 KGIVHRDLKPQNILLSHNSGRKPspndiRLKIADFGFArfLQDGMMAATLCGSPMY---------MAPEVIMSL------ 175
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 429 iDY-SKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQL-PALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14120 176 -QYdAKADLWSIGTIVYQCLTGKAPFQAQTPQELKAFYEKNANLrPNIPSGTSPALKDLLLGLLKRNPKDR 245
STKc_ULK3 cd14121
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the ...
353-499 3.61e-12

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK3 mRNA is up-regulated in fibroblasts after Ras-induced senescence, and its overexpression induces both autophagy and senescence in a fibroblast cell line. ULK3, through its kinase activity, positively regulates Gli proteins, mediators of the Sonic hedgehog (Shh) signaling pathway that is implicated in tissue homeostasis maintenance and neurogenesis. It is inhibited by binding to Suppressor of Fused (Sufu). The ULK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271023 [Multi-domain]  Cd Length: 252  Bit Score: 66.54  E-value: 3.61e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 353 LVQQGIAHRDLKSDNILVELDPDgcPWLVIADFGCC--LADESIGLQLPFSSWYvdrggngclMAPEVSTARpgpraviD 430
Cdd:cd14121 111 LREHNISHMDLKPQNLLLSSRYN--PVLKLADFGFAqhLKPNDEAHSLRGSPLY---------MAPEMILKK-------K 172
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 431 Y-SKADAWAVGAIAYEI-FGlVNPFYGQGKAHLES--RSYQEAQLPALPEsVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14121 173 YdARVDLWSVGVILYEClFG-RAPFASRSFEELEEkiRSSKPIEIPTRPE-LSADCRDLLLRLLQRDPDRRIS 243
STKc_MSK_N cd05583
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
350-497 6.88e-12

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270735 [Multi-domain]  Cd Length: 268  Bit Score: 66.26  E-value: 6.88e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccLADEsiglqlpFSSWYVDRGGNGC----LMAPEVstARPGP 425
Cdd:cd05583 112 LEHLHKLGIIYRDIKLENIL--LDSEG--HVVLTDFG--LSKE-------FLPGENDRAYSFCgtieYMAPEV--VRGGS 176
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 426 RAvidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLE---SRSYQEAQlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05583 177 DG---HDKAvDWWSLGVLTYELLTGASPFTVDGERNSQseiSKRILKSH-PPIPKTFSAEAKDFILKLLEKDPKKR 248
STKc_MEKK1_plant cd06632
Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP) ...
349-500 8.30e-12

Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of plant MAPK kinase kinases (MAPKKKs) including Arabidopsis thaliana MEKK1 and MAPKKK3. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270802 [Multi-domain]  Cd Length: 259  Bit Score: 65.89  E-value: 8.30e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVelDPDGCpwLVIADFGCCLADESIGLQLPFSswyvdrgGNGCLMAPEVSTARPGPRAV 428
Cdd:cd06632 114 GLAYLHSRNTVHRDIKGANILV--DTNGV--VKLADFGMAKHVEAFSFAKSFK-------GSPYWMAPEVIMQKNSGYGL 182
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 429 idysKADAWAVGAIAYEIFGLVNPF--YGQGKAHLESRSYQEaqLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06632 183 ----AVDIWSLGCTVLEMATGKPPWsqYEGVAAIFKIGNSGE--LPPIPDHLSPDAKDFIRLCLQRDPEDRPTA 250
STKc_PKC cd05570
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer ...
349-497 1.79e-11

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270722 [Multi-domain]  Cd Length: 318  Bit Score: 65.31  E-value: 1.79e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIglqlpfssWYVDRGGNGC----LMAPEVSTARPG 424
Cdd:cd05570 108 ALQFLHERGIIYRDLKLDNVL--LDAEG--HIKIADFGMC--KEGI--------WGGNTTSTFCgtpdYIAPEILREQDY 173
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 425 PRAVidyskaDAWAVGAIAYEIFGLVNPFYGQGKAHL-ESRSYQEaqlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05570 174 GFSV------DWWALGVLLYEMLAGQSPFEGDDEDELfEAILNDE---VLYPRWLSREAVSILKGLLTKDPARR 238
STKc_CaMKII cd14086
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
348-503 2.13e-11

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain followed by a regulatory domain that harbors a CaM binding site. In addition, CaMKII contains a C-terminal association domain that facilitates oligomerization. There are four CaMKII proteins (alpha, beta, gamma, delta) encoded by different genes; each gene undergoes alternative splicing to produce more than 30 isoforms. CaMKII-alpha and -beta are enriched in neurons while CaMKII-gamma and -delta are predominant in myocardium. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. It is a major component of the postsynaptic density and is critical in regulating synaptic plasticity including long-term potentiation. It is critical in regulating ion channels and proteins involved in myocardial excitation-contraction and excitation-transcription coupling. Excessive CaMKII activity promotes processes that contribute to heart failure and arrhythmias. The CaMKII subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270988 [Multi-domain]  Cd Length: 292  Bit Score: 65.14  E-value: 2.13e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFGccLADESIGLQlpfSSWYVDRGGNGcLMAPEVSTARPgpra 427
Cdd:cd14086 111 ESVNHCHQNGIVHRDLKPENLLLASKSKGAA-VKLADFG--LAIEVQGDQ---QAWFGFAGTPG-YLSPEVLRKDP---- 179
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 428 vidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPE--SVPPDVRQLVRALLQREASKRPSARVA 503
Cdd:cd14086 180 ---YGKPvDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEwdTVTPEAKDLINQMLTVNPAKRITAAEA 255
STKc_16 cd13986
Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the ...
357-501 2.20e-11

Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK16 is associated with many names including Myristylated and Palmitylated Serine/threonine Kinase 1 (MPSK1), Kinase related to cerevisiae and thaliana (Krct), and Protein Kinase expressed in day 12 fetal liver (PKL12). It is widely expressed in mammals with highest levels found in liver, testis, and kidney. It is localized in the Golgi but is translocated to the nucleus upon disorganization of the Golgi. STK16 is constitutively active and is capable of phosphorylating itself and other substrates. It may be involved in regulating stromal-epithelial interactions during mammary gland ductal morphogenesis. It may also function as a transcriptional co-activator of type-C natriuretic peptide and VEGF. The STK16 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270888 [Multi-domain]  Cd Length: 282  Bit Score: 64.62  E-value: 2.20e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILveLDPDGCPwlVIADFG-CCLAD---ESIGLQLPFSSWYVDRggngCLM---APEVSTARPGprAVI 429
Cdd:cd13986 129 PYAHRDIKPGNVL--LSEDDEP--ILMDLGsMNPARieiEGRREALALQDWAAEH----CTMpyrAPELFDVKSH--CTI 198
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 430 DySKADAWAVGAIAYEIFGLVNPF---YGQGKahlesrSYQEAQLPAL-----PESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd13986 199 D-EKTDIWSLGCTLYALMYGESPFeriFQKGD------SLALAVLSGNysfpdNSRYSEELHQLVKSMLVVNPAERPSID 271
STKc_ROCK_NDR_like cd05573
Catalytic domain of Rho-associated coiled-coil containing protein kinase (ROCK)- and Nuclear ...
350-490 3.35e-11

Catalytic domain of Rho-associated coiled-coil containing protein kinase (ROCK)- and Nuclear Dbf2-Related (NDR)-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. The ROCK/NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270725 [Multi-domain]  Cd Length: 350  Bit Score: 65.00  E-value: 3.35e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCL------ADESIGLQLPFSSWYVDRGGNGCL---------- 413
Cdd:cd05573 114 LDSLHKLGFIHRDIKPDNIL--LDADG--HIKLADFGLCTkmnksgDRESYLNDSVNTLFQDNVLARRRPhkqrrvrays 189
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 414 -------MAPEVSTARPgpravidYSK-ADAWAVGAIAYE-IFGLVnPFYGQGKAHLESR--SYQEA-QLPALPEsVPPD 481
Cdd:cd05573 190 avgtpdyIAPEVLRGTG-------YGPeCDWWSLGVILYEmLYGFP-PFYSDSLVETYSKimNWKESlVFPDDPD-VSPE 260

                ....*....
gi 14165272 482 VRQLVRALL 490
Cdd:cd05573 261 AIDLIRRLL 269
STKc_SGK cd05575
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; ...
352-497 4.03e-11

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270727 [Multi-domain]  Cd Length: 323  Bit Score: 64.65  E-value: 4.03e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 352 HLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGlqlpfsswyvDRGGNGC----LMAPEVSTARPGPRA 427
Cdd:cd05575 111 YLHSLNIIYRDLKPENIL--LDSQG--HVVLTDFGLCKEGIEPS----------DTTSTFCgtpeYLAPEVLRKQPYDRT 176
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 428 VidyskaDAWAVGAIAYE-IFGLvNPFYGQGKAHLESRSYQEaQLpALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05575 177 V------DWWCLGAVLYEmLYGL-PPFYSRDTAEMYDNILHK-PL-RLRTNVSPSARDLLEGLLQKDRTKR 238
STKc_CaMKI_gamma cd14166
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
348-497 6.04e-11

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I gamma; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271068 [Multi-domain]  Cd Length: 285  Bit Score: 63.47  E-value: 6.04e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDGCPWLVIADFGCC-LADESIGLQLPFSSWYVdrggngclmAPEVSTARPgpr 426
Cdd:cd14166 111 SAVKYLHENGIVHRDLKPENLLY-LTPDENSKIMITDFGLSkMEQNGIMSTACGTPGYV---------APEVLAQKP--- 177
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 427 avidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESR---SYQEAQLPaLPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14166 178 ----YSKAvDCWSIGVITYILLCGYPPFYEETESRLFEKikeGYYEFESP-FWDDISESAKDFIRHLLEKNPSKR 247
STKc_LKB1 cd14119
Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer ...
348-499 6.56e-11

Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LKB1, also called STK11, was first identified as a tumor suppressor responsible for Peutz-Jeghers syndrome, a disorder that leads to an increased risk of spontaneous epithelial cancer. It serves as a master upstream kinase that activates AMP-activated protein kinase (AMPK) and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. To be activated, LKB1 requires the adaptor proteins STe20-Related ADaptor (STRAD) and mouse protein 25 (MO25). The LKB1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271021 [Multi-domain]  Cd Length: 255  Bit Score: 63.05  E-value: 6.56e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLADEsigLQLpFSSWYVDRGGNGC--LMAPEVStarpgp 425
Cdd:cd14119 108 DGLEYLHSQGIIHKDIKPGNLLLTTDGT----LKISDFG--VAEA---LDL-FAEDDTCTTSQGSpaFQPPEIA------ 171
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 426 RAVIDYS--KADAWAVGAIAYEIFGLVNPFYGQGKAHL-ESRSYQEAQlpaLPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14119 172 NGQDSFSgfKVDIWSAGVTLYNMTTGKYPFEGDNIYKLfENIGKGEYT---IPDDVDPDLQDLLRGMLEKDPEKRFT 245
STKc_OSR1_SPAK cd06610
Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and ...
348-500 6.99e-11

Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270787 [Multi-domain]  Cd Length: 267  Bit Score: 63.15  E-value: 6.99e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFG--CCLADesiglqlpfsswYVDRG--------GNGCLMAPE 417
Cdd:cd06610 113 KGLEYLHSNGQIHRDVKAGNIL--LGEDGS--VKIADFGvsASLAT------------GGDRTrkvrktfvGTPCWMAPE 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 418 VSTARPGpravidY-SKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQlPALPESVPPDV-----RQLVRALLQ 491
Cdd:cd06610 177 VMEQVRG------YdFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDP-PSLETGADYKKysksfRKMISLCLQ 249

                ....*....
gi 14165272 492 REASKRPSA 500
Cdd:cd06610 250 KDPSKRPTA 258
STKc_RSK_C cd14091
C-terminal catalytic domain of the Serine/Threonine Kinases, Ribosomal S6 kinases; STKs ...
350-500 8.59e-11

C-terminal catalytic domain of the Serine/Threonine Kinases, Ribosomal S6 kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), 90 kDa ribosomal protein S6 kinases (p90-RSKs), or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270993 [Multi-domain]  Cd Length: 291  Bit Score: 63.04  E-value: 8.59e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVElDPDGCP-WLVIADFGccLADesiglQLpfsswyvdRGGNGCLM---------APEVs 419
Cdd:cd14091 107 VEYLHSQGVVHRDLKPSNILYA-DESGDPeSLRICDFG--FAK-----QL--------RAENGLLMtpcytanfvAPEV- 169
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 420 TARPGpravidYSKA-DAWAVGAIAYEIFGLVNPF--------------YGQGKAHLESRSYqeaqlpalpESVPPDVRQ 484
Cdd:cd14091 170 LKKQG------YDAAcDIWSLGVLLYTMLAGYTPFasgpndtpevilarIGSGKIDLSGGNW---------DHVSDSAKD 234
                       170
                ....*....|....*.
gi 14165272 485 LVRALLQREASKRPSA 500
Cdd:cd14091 235 LVRKMLHVDPSQRPTA 250
PTKc cd00192
Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
348-507 1.30e-10

Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers.The PTK family is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270623 [Multi-domain]  Cd Length: 262  Bit Score: 62.17  E-value: 1.30e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeldpdGCPWLV-IADFGccLADESiglqlpFSSWYVDRGGNGCL----MAPEvstar 422
Cdd:cd00192 116 KGMEYLASKKFVHRDLAARNCLV-----GEDLVVkISDFG--LSRDI------YDDDYYRKKTGGKLpirwMAPE----- 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 pgpraVIDY----SKADAWAVGAIAYEIFGL-VNPFYG----QGKAHLESRSYQEaqlpaLPESVPPDVRQLVRALLQRE 493
Cdd:cd00192 178 -----SLKDgiftSKSDVWSFGVLLWEIFTLgATPYPGlsneEVLEYLRKGYRLP-----KPENCPDELYELMLSCWQLD 247
                       170
                ....*....|....
gi 14165272 494 ASKRPSARVAANVL 507
Cdd:cd00192 248 PEDRPTFSELVERL 261
STKc_Rad53_Cds1 cd14098
Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the ...
348-505 1.38e-10

Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Rad53 and Cds1 are the checkpoint kinase 2 (Chk2) homologs found in budding and fission yeast, respectively. They play a central role in the cell's response to DNA lesions to prevent genome rearrangements and maintain genome integrity. They are phosphorylated in response to DNA damage and incomplete replication, and are essential for checkpoint control. They help promote DNA repair by stalling the cell cycle prior to mitosis in the presence of DNA damage. The Rad53/Cds1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271000 [Multi-domain]  Cd Length: 265  Bit Score: 62.11  E-value: 1.38e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPdgcPWLV-IADFGccLADESIGlqlpfSSWYVDRGGNGCLMAPEV--STARPG 424
Cdd:cd14098 112 EAMAYTHSMGITHRDLKPENILITQDD---PVIVkISDFG--LAKVIHT-----GTFLVTFCGTMAYLAPEIlmSKEQNL 181
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 PRAvidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLESR----SYQEAqlPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14098 182 QGG---YSnLVDMWSVGCLVYVMLTGALPFDGSSQLPVEKRirkgRYTQP--PLVDFNISEEAIDFILRLLDVDPEKRMT 256

                ....*.
gi 14165272 500 ARVAAN 505
Cdd:cd14098 257 AAQALD 262
STKc_PDK1 cd05581
Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs ...
349-500 1.48e-10

Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. It is essential for normal embryo development and is important in regulating cell volume. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270733 [Multi-domain]  Cd Length: 278  Bit Score: 62.23  E-value: 1.48e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFG--CCLADESIGLQLPFSSW-----YVDRGGNGC----LMAPE 417
Cdd:cd05581 113 ALEYLHSKGIIHRDLKPENIL--LDEDM--HIKITDFGtaKVLGPDSSPESTKGDADsqiayNQARAASFVgtaeYVSPE 188
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 418 VSTarpgpRAVIDYSkADAWAVGAIAYEIFGLVNPFYGQGKAHL----ESRSYQeaqlpaLPESVPPDVRQLVRALLQRE 493
Cdd:cd05581 189 LLN-----EKPAGKS-SDLWALGCIIYQMLTGKPPFRGSNEYLTfqkiVKLEYE------FPENFPPDAKDLIQKLLVLD 256

                ....*..
gi 14165272 494 ASKRPSA 500
Cdd:cd05581 257 PSKRLGV 263
PKc_STE cd05122
Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the ...
348-500 1.70e-10

Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPKK kinases (MAPKKKs), or MAPKKK kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. The STE family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270692 [Multi-domain]  Cd Length: 254  Bit Score: 61.84  E-value: 1.70e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCClADESIGLQLpfSSWYvdrgGNGCLMAPEVSTARPgpra 427
Cdd:cd05122 109 KGLEYLHSHGIIHRDIKAANILLTSDGE----VKLIDFGLS-AQLSDGKTR--NTFV----GTPYWMAPEVIQGKP---- 173
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 428 vidYS-KADAWAVGAIAYEIFGLVNPFYGQG--KAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd05122 174 ---YGfKADIWSLGITAIEMAEGKPPYSELPpmKALFLIATNGPPGLRN-PKKWSKEFKDFLKKCLQKDPEKRPTA 245
STKc_CMGC cd05118
Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
348-505 2.07e-10

Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and other kinases. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Other members of the CMGC family include casein kinase 2 (CK2), Dual-specificity tYrosine-phosphorylated and -Regulated Kinase (DYRK), Glycogen Synthase Kinase 3 (GSK3), among many others. The CMGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270688 [Multi-domain]  Cd Length: 249  Bit Score: 61.48  E-value: 2.07e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGcpwLVIADFG-CCLADESIGLQLPFSSWYvdrggngclMAPEV-STARPgp 425
Cdd:cd05118 112 QALDFLHSNGIIHRDLKPENILINLELGQ---LKLADFGlARSFTSPPYTPYVATRWY---------RAPEVlLGAKP-- 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 426 ravidYSKA-DAWAVGAIAYEIFglvnpfygQGKAHLESRSYQEaQLPALPESV-PPDVRQLVRALLQREASKRPSARVA 503
Cdd:cd05118 178 -----YGSSiDIWSLGCILAELL--------TGRPLFPGDSEVD-QLAKIVRLLgTPEALDLLSKMLKYDPAKRITASQA 243

                ..
gi 14165272 504 AN 505
Cdd:cd05118 244 LA 245
STKc_Nek10 cd08528
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
355-498 2.38e-10

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Nek10 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270867 [Multi-domain]  Cd Length: 270  Bit Score: 61.36  E-value: 2.38e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 355 QQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLADEsiglQLPFSSWYVDRGGNGCLMAPEVSTARPgpravidYS-K 433
Cdd:cd08528 132 EKQIVHRDLKPNNIMLGEDDK----VTITDFG--LAKQ----KGPESSKMTSVVGTILYSCPEIVQNEP-------YGeK 194
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 434 ADAWAVGAIAYEIFGLVNPFYGQGKAHLESRsYQEAQLPALPESV-PPDVRQLVRALLQREASKRP 498
Cdd:cd08528 195 ADIWALGCILYQMCTLQPPFYSTNMLTLATK-IVEAEYEPLPEGMySDDITFVIRSCLTPDPEARP 259
STKc_GRK cd05577
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs ...
349-501 2.71e-10

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. They contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7, which are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270729 [Multi-domain]  Cd Length: 278  Bit Score: 61.39  E-value: 2.71e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpwlviadfGCCLADESIGLQLPFSSWYVDRGGNGCLMAPEVSTArpgpRAV 428
Cdd:cd05577 107 GLEHLHNRFIVYRDLKPENIL--LDDHG---------HVRISDLGLAVEFKGGKKIKGRVGTHGYMAPEVLQK----EVA 171
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 429 IDYSkADAWAVGAIAYEIFGLVNPFYGQG----KAHLESRSYQEAQlpALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd05577 172 YDFS-VDWFALGCMLYEMIAGRSPFRQRKekvdKEELKRRTLEMAV--EYPDSFSPEARSLCEGLLQKDPERRLGCR 245
STKc_LKB1_CaMKK cd14008
Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent ...
349-502 4.28e-10

Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent Protein Kinase Kinase, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Both LKB1 and CaMKKs can phosphorylate and activate AMP-activated protein kinase (AMPK). LKB1, also called STK11, serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMPK. Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The LKB1/CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270910 [Multi-domain]  Cd Length: 267  Bit Score: 60.64  E-value: 4.28e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCcladesiglqlpfsSWYVDrGGNGCL---------MAPEVS 419
Cdd:cd14008 120 GLEYLHENGIVHRDIKPENLL--LTADGT--VKISDFGV--------------SEMFE-DGNDTLqktagtpafLAPELC 180
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 420 TARPGPravIDYSKADAWAVGAIAYE-IFGLVnPFYGqgkaHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRP 498
Cdd:cd14008 181 DGDSKT---YSGKAADIWALGVTLYClVFGRL-PFNG----DNILELYEAIQNQNDEFPIPPELSPELKDLLRRMLEKDP 252

                ....
gi 14165272 499 SARV 502
Cdd:cd14008 253 EKRI 256
STKc_Byr2_like cd06628
Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein ...
348-500 4.98e-10

Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. The Byr2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270798 [Multi-domain]  Cd Length: 267  Bit Score: 60.63  E-value: 4.98e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVelDPDGCpwLVIADFGCCLADESIGLQLPFSSWYVDRGGNGCLMAPEVSTARPGPRa 427
Cdd:cd06628 117 KGLNYLHNRGIIHRDIKGANILV--DNKGG--IKISDFGISKKLEANSLSTKNNGARPSLQGSVFWMAPEVVKQTSYTR- 191
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 428 vidysKADAWAVGAIAYEIFGLVNPF--YGQGKAHLESRSYqeaQLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06628 192 -----KADIWSLGCLVVEMLTGTHPFpdCTQMQAIFKIGEN---ASPTIPSNISSEARDFLEKTFEIDHNKRPTA 258
STKc_YSK4 cd06631
Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs ...
348-500 5.83e-10

Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270801 [Multi-domain]  Cd Length: 266  Bit Score: 60.14  E-value: 5.83e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCPWLViaDFGC----CLADESIGLQLPFSSWYvdrgGNGCLMAPEVSTARP 423
Cdd:cd06631 114 EGVAYLHNNNVIHRDIKGNNIM--LMPNGVIKLI--DFGCakrlCINLSSGSQSQLLKSMR----GTPYWMAPEVINETG 185
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 GPRavidysKADAWAVGAIAYEI------FGLVNP----FY-GQGKAhlesrsyqeaQLPALPESVPPDVRQLVRALLQR 492
Cdd:cd06631 186 HGR------KSDIWSIGCTVFEMatgkppWADMNPmaaiFAiGSGRK----------PVPRLPDKFSPEARDFVHACLTR 249

                ....*...
gi 14165272 493 EASKRPSA 500
Cdd:cd06631 250 DQDERPSA 257
STKc_MAST_like cd05579
Catalytic domain of Microtubule-associated serine/threonine (MAST) kinase-like proteins; STKs ...
349-506 5.96e-10

Catalytic domain of Microtubule-associated serine/threonine (MAST) kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAST kinases, MAST-like (MASTL) kinases (also called greatwall kinase or Gwl), and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which like in MASTL, also contains an insert relative to MAST kinases. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MASTL/Gwl is involved in the regulation of mitotic entry, mRNA stabilization, and DNA checkpoint recovery. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. The MAST-like kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270731 [Multi-domain]  Cd Length: 272  Bit Score: 60.31  E-value: 5.96e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCC---LADESIGLQLPFSSWYVDRGGNGCL------MAPEVS 419
Cdd:cd05579 105 ALEYLHSHGIIHRDLKPDNIL--IDANG--HLKLTDFGLSkvgLVRRQIKLSIQKKSNGAPEKEDRRIvgtpdyLAPEIL 180
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 420 TARPgpravidYSKA-DAWAVGAIAYEIFGLVNPFYGQGK----AHLESRSYqeaQLPALPEsVPPDVRQLVRALLQREA 494
Cdd:cd05579 181 LGQG-------HGKTvDWWSLGVILYEFLVGIPPFHAETPeeifQNILNGKI---EWPEDPE-VSDEAKDLISKLLTPDP 249
                       170
                ....*....|..
gi 14165272 495 SKRPSARVAANV 506
Cdd:cd05579 250 EKRLGAKGIEEI 261
STKc_PKN cd05589
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer ...
349-455 6.94e-10

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270741 [Multi-domain]  Cd Length: 326  Bit Score: 60.78  E-value: 6.94e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGlqlpfsswYVDRGGNGC----LMAPEVSTARPG 424
Cdd:cd05589 113 GLQFLHEHKIVYRDLKLDNLL--LDTEG--YVKIADFGLC--KEGMG--------FGDRTSTFCgtpeFLAPEVLTDTSY 178
                        90       100       110
                ....*....|....*....|....*....|...
gi 14165272 425 PRAVidyskaDAWAVGAIAYEIfgLV--NPFYG 455
Cdd:cd05589 179 TRAV------DWWGLGVLIYEM--LVgeSPFPG 203
PTZ00283 PTZ00283
serine/threonine protein kinase; Provisional
350-505 7.14e-10

serine/threonine protein kinase; Provisional


Pssm-ID: 240344 [Multi-domain]  Cd Length: 496  Bit Score: 61.42  E-value: 7.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  350 VDHLVQQGIAHRDLKSDNILveLDPDGcpwLV-IADFGccladesiglqlpFSSWYV-----DRGGNGC----LMAPEVS 419
Cdd:PTZ00283 156 VHHVHSKHMIHRDIKSANIL--LCSNG---LVkLGDFG-------------FSKMYAatvsdDVGRTFCgtpyYVAPEIW 217
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  420 TARPgpravidYSK-ADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQeAQLPALPESVPPDVRQLVRALLQREASKRP 498
Cdd:PTZ00283 218 RRKP-------YSKkADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA-GRYDPLPPSISPEMQEIVTALLSSDPKRRP 289

                 ....*..
gi 14165272  499 SARVAAN 505
Cdd:PTZ00283 290 SSSKLLN 296
STKc_TGFbR-like cd13998
Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; ...
310-504 9.48e-10

Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. There are two types of TGFbeta receptors included in this subfamily, I and II, that play different roles in signaling. For signaling to occur, the ligand first binds to the high-affinity type II receptor, which is followed by the recruitment of the low-affinity type I receptor to the complex and its activation through trans-phosphorylation by the type II receptor. The active type I receptor kinase starts intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. Different ligands interact with various combinations of types I and II receptors to elicit a specific signaling pathway. Activins primarily signal through combinations of ACVR1b/ALK7 and ACVR2a/b; myostatin and GDF11 through TGFbR1/ALK4 and ACVR2a/b; BMPs through ACVR1/ALK1 and BMPR2; and TGFbeta through TGFbR1 and TGFbR2. The TGFbR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270900 [Multi-domain]  Cd Length: 289  Bit Score: 59.76  E-value: 9.48e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 310 HGRT-LFLVMKNYP-CTLRQYLCVNTPSPRLAAMMLLQLLEGVDHL---------VQQGIAHRDLKSDNILVEldPDGCp 378
Cdd:cd13998  63 ALRTeLWLVTAFHPnGSL*DYLSLHTIDWVSLCRLALSVARGLAHLhseipgctqGKPAIAHRDLKSKNILVK--NDGT- 139
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 379 wlviadfgCCLADESIGLQLPFSSWYVDRGGNGCL-----MAPEVSTARPGPRAVIDYSKADAWAVGAIAYEI------- 446
Cdd:cd13998 140 --------CCIADFGLAVRLSPSTGEEDNANNGQVgtkryMAPEVLEGAINLRDFESFKRVDIYAMGLVLWEMasrctdl 211
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 447 FGLVN----PFYGQGKAHLESRSYQEA-----QLPALPES--VPPDVRQLVRaLLQREASKRPSARVAA 504
Cdd:cd13998 212 FGIVEeykpPFYSEVPNHPSFEDMQEVvvrdkQRPNIPNRwlSHPGLQSLAE-TIEECWDHDAEARLTA 279
STKc_HAL4_like cd13994
Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs ...
348-500 9.73e-10

Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of HAL4, Saccharomyces cerevisiae Ptk2/Stk2, and similar fungal proteins. Proteins in this subfamily are involved in regulating ion transporters. In budding and fission yeast, HAL4 promotes potassium ion uptake, which increases cellular resistance to other cations such as sodium, lithium, and calcium ions. HAL4 stabilizes the major high-affinity K+ transporter Trk1 at the plasma membrane under low K+ conditions, which prevents endocytosis and vacuolar degradation. Budding yeast Ptk2 phosphorylates and regulates the plasma membrane H+ ATPase, Pma1. The HAL4-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270896 [Multi-domain]  Cd Length: 265  Bit Score: 59.63  E-value: 9.73e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFG-----CCLADESIGLQlpfsswyvdRG--GNGCLMAPEVST 420
Cdd:cd13994 109 RGVAYLHSHGIAHRDLKPENIL--LDEDGV--LKLTDFGtaevfGMPAEKESPMS---------AGlcGSEPYMAPEVFT 175
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 421 ARP-GPRAVidyskaDAWAVGAIAYEIFGLVNPFygqGKAHLESRSYQEAQL-------PALP--ESVPPDVRQLVRALL 490
Cdd:cd13994 176 SGSyDGRAV------DVWSCGIVLFALFTGRFPW---RSAKKSDSAYKAYEKsgdftngPYEPieNLLPSECRRLIYRML 246
                       170
                ....*....|
gi 14165272 491 QREASKRPSA 500
Cdd:cd13994 247 HPDPEKRITI 256
STKc_Mnk cd14090
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase ...
348-500 1.08e-09

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase signal-integrating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270992 [Multi-domain]  Cd Length: 289  Bit Score: 59.74  E-value: 1.08e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADF----GCCL-ADESIGLQLPFSSWYVdrgGNGCLMAPEVSTAR 422
Cdd:cd14090 111 SALDFLHDKGIAHRDLKPENILCESMDKVSP-VKICDFdlgsGIKLsSTSMTPVTTPELLTPV---GSAEYMAPEVVDAF 186
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 PGPRAVIDySKADAWAVGAIAYEIFGLVNPFYG---------QGKA-----HLESRSYQEAQLpALPES----VPPDVRQ 484
Cdd:cd14090 187 VGEALSYD-KRCDLWSLGVILYIMLCGYPPFYGrcgedcgwdRGEAcqdcqELLFHSIQEGEY-EFPEKewshISAEAKD 264
                       170
                ....*....|....*.
gi 14165272 485 LVRALLQREASKRPSA 500
Cdd:cd14090 265 LISHLLVRDASQRYTA 280
STKc_Cdc7_like cd06627
Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs ...
348-501 1.11e-09

Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270797 [Multi-domain]  Cd Length: 254  Bit Score: 59.16  E-value: 1.11e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGcpwLV-IADFGCC--LADESIGLQLPFSSWYvdrggngcLMAPEVSTARPG 424
Cdd:cd06627 110 EGLAYLHEQGVIHRDIKGANIL--TTKDG---LVkLADFGVAtkLNEVEKDENSVVGTPY--------WMAPEVIEMSGV 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pravidYSKADAWAVGAIAYEIFGLVNPFYG-QGKAHLesrsYQEAQL--PALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd06627 177 ------TTASDIWSVGCTVIELLTGNPPYYDlQPMAAL----FRIVQDdhPPLPENISPELRDFLLQCFQKDPTLRPSAK 246
STKc_Pat1_like cd13993
Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of ...
349-505 1.18e-09

Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Pat1 (also called Ran1), Saccharomyces cerevisiae VHS1 and KSP1, and similar fungal STKs. Pat1 blocks Mei2, an RNA-binding protein which is indispensable in the initiation of meiosis. Pat1 is inactivated and Mei2 activated, which initiates meiosis, under nutrient-deprived conditions through a signaling cascade involving Ste11. Meiosis induced by Pat1 inactivation may show different characteristics than normal meiosis including aberrant positioning of centromeres. VHS1 was identified in a screen for suppressors of cell cycle arrest at the G1/S transition, while KSP1 may be involved in regulating PRP20, which is required for mRNA export and maintenance of nuclear structure. The Pat1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270895 [Multi-domain]  Cd Length: 267  Bit Score: 59.29  E-value: 1.18e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDGcpwLVIADFGccLA-------DESIGlqlpfSSWYvdrggngclMAPEVSTA 421
Cdd:cd13993 119 AVKHCHSLGIYHRDIKPENILLSQDEGT---VKLCDFG--LAttekismDFGVG-----SEFY---------MAPECFDE 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 422 RPGPRAVIDYSKADAWAVGAIAYEIFGLVNPFygqGKAHLESRSYQEAQL--PALPESVPP---DVRQLVRALLQREASK 496
Cdd:cd13993 180 VGRSLKGYPCAAGDIWSLGIILLNLTFGRNPW---KIASESDPIFYDYYLnsPNLFDVILPmsdDFYNLLRQIFTVNPNN 256

                ....*....
gi 14165272 497 RPSARVAAN 505
Cdd:cd13993 257 RILLPELQL 265
STKc_p70S6K cd05584
Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase; STKs ...
352-497 1.35e-09

Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270736 [Multi-domain]  Cd Length: 323  Bit Score: 59.73  E-value: 1.35e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 352 HLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESI---GLQLPFSswyvdrgGNGCLMAPEVSTARPGPRAV 428
Cdd:cd05584 115 HLHSLGIIYRDLKPENIL--LDAQG--HVKLTDFGLC--KESIhdgTVTHTFC-------GTIEYMAPEILTRSGHGKAV 181
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 429 idyskaDAWAVGAIAYEIFGLVNPFYGQGKahlesRSYQEAQLPA---LPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05584 182 ------DWWSLGALMYDMLTGAPPFTAENR-----KKTIDKILKGklnLPPYLTNEARDLLKKLLKRNVSSR 242
STKc_FA2-like cd08529
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar ...
349-501 1.39e-09

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily contains FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270868 [Multi-domain]  Cd Length: 256  Bit Score: 58.96  E-value: 1.39e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladESIGLQLPFSSWYVdrgGNGCLMAPEVSTARPgprav 428
Cdd:cd08529 113 GLSHLHSKKILHRDIKSMNIFLDKGDN----VKIGDLGVA---KILSDTTNFAQTIV---GTPYYLSPELCEDKP----- 177
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 429 idYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLeSRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd08529 178 --YNeKSDVWALGCVLYELCTGKHPFEAQNQGAL-ILKIVRGKYPPISASYSQDLSQLIDSCLTKDYRQRPDTT 248
TyrKc smart00219
Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.
348-499 1.54e-09

Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.


Pssm-ID: 197581 [Multi-domain]  Cd Length: 257  Bit Score: 58.70  E-value: 1.54e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    348 EGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLV-IADFGccLADEsiglqLPFSSWYVDRGGNGCL--MAPEvstarpg 424
Cdd:smart00219 113 RGMEYLESKNFIHRDLAARNCLVGENL-----VVkISDFG--LSRD-----LYDDDYYRKRGGKLPIrwMAPE------- 173
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    425 praVIDY----SKADAWAVGAIAYEIFGL-VNPFYGQGKAHLESRSYQEAQLPaLPESVPPDVRQLVRALLQREASKRPS 499
Cdd:smart00219 174 ---SLKEgkftSKSDVWSFGVLLWEIFTLgEQPYPGMSNEEVLEYLKNGYRLP-QPPNCPPELYDLMLQCWAEDPEDRPT 249
STKc_MOK cd07831
Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase; STKs ...
266-455 1.68e-09

Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270825 [Multi-domain]  Cd Length: 282  Bit Score: 59.21  E-value: 1.68e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIIR----VLRAFTSSVPLLpGALVD---YpDVLPSRLHPegLGHGRtlflvMKNYpctLRQYLCvntpsprl 338
Cdd:cd07831  52 RRLSPHPNILRlievLFDRKTGRLALV-FELMDmnlY-ELIKGRKRP--LPEKR-----VKNY---MYQLLK-------- 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 339 aammllqlleGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLVIADFGCCladESIGLQLPFSS-----WYvdrggngcl 413
Cdd:cd07831 112 ----------SLDHMHRNGIFHRDIKPENILIKDDI-----LKLADFGSC---RGIYSKPPYTEyistrWY--------- 164
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 14165272 414 MAPE--VSTARPGPravidysKADAWAVGAIAYEIFGLVNPFYG 455
Cdd:cd07831 165 RAPEclLTDGYYGP-------KMDIWAVGCVFFEILSLFPLFPG 201
STKc_MSK2_N cd05614
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
350-497 1.89e-09

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270765 [Multi-domain]  Cd Length: 332  Bit Score: 59.55  E-value: 1.89e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFgccladesiGLQLPFSSWYVDRGGNGC----LMAPEVSTARPGP 425
Cdd:cd05614 118 LEHLHKLGIVYRDIKLENIL--LDSEG--HVVLTDF---------GLSKEFLTEEKERTYSFCgtieYMAPEIIRGKSGH 184
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 426 RAVIDYskadaWAVGAIAYEIFGLVNPFYGQGKAHLE---SRSYQEAQlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05614 185 GKAVDW-----WSLGILMFELLTGASPFTLEGEKNTQsevSRRILKCD-PPFPSFIGPVARDLLQKLLCKDPKKR 253
STKc_CDK_like cd07829
Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs ...
271-446 1.90e-09

Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270823 [Multi-domain]  Cd Length: 282  Bit Score: 59.03  E-value: 1.90e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTSSvpllpgalvdypdvlpsrlhpeglghgRTLFLVMKNYPCTLRQYLCVNTP--SPRLAAMMLLQLLE 348
Cdd:cd07829  57 HPNIVKLLDVIHTE---------------------------NKLYLVFEYCDQDLKKYLDKRPGplPPNLIKSIMYQLLR 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVelDPDGCpwLVIADFGccLA-----------DESIGLqlpfssWYvdRggngclmAPE 417
Cdd:cd07829 110 GLAYCHSHRILHRDLKPQNLLI--NRDGV--LKLADFG--LArafgiplrtytHEVVTL------WY--R-------APE 168
                       170       180       190
                ....*....|....*....|....*....|...
gi 14165272 418 V---STarpgpraviDYSKA-DAWAVGAIAYEI 446
Cdd:cd07829 169 IllgSK---------HYSTAvDIWSVGCIFAEL 192
STYKc smart00221
Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class ...
348-499 2.05e-09

Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.


Pssm-ID: 214568 [Multi-domain]  Cd Length: 258  Bit Score: 58.33  E-value: 2.05e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    348 EGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLV-IADFGccLADEsiglqLPFSSWYVDRGGNGCL--MAPEvstarpg 424
Cdd:smart00221 114 RGMEYLESKNFIHRDLAARNCLVGENL-----VVkISDFG--LSRD-----LYDDDYYKVKGGKLPIrwMAPE------- 174
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272    425 praVIDY----SKADAWAVGAIAYEIFGL-VNPFYGQGKAHLESRSyQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:smart00221 175 ---SLKEgkftSKSDVWSFGVLLWEIFTLgEEPYPGMSNAEVLEYL-KKGYRLPKPPNCPPELYKLMLQCWAEDPEDRPT 250
STKc_Mnk2 cd14173
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase ...
348-508 2.11e-09

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271075 [Multi-domain]  Cd Length: 288  Bit Score: 58.89  E-value: 2.11e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVElDPDGCPWLVIADFgcclaDESIGLQL-----PFSS-WYVDRGGNGCLMAPEVSTA 421
Cdd:cd14173 111 SALDFLHNKGIAHRDLKPENILCE-HPNQVSPVKICDF-----DLGSGIKLnsdcsPISTpELLTPCGSAEYMAPEVVEA 184
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 422 RPGPRAVIDySKADAWAVGAIAYEIFGLVNPFYGQ---------GKA-----HLESRSYQEAQLpALPES----VPPDVR 483
Cdd:cd14173 185 FNEEASIYD-KRCDLWSLGVILYIMLSGYPPFVGRcgsdcgwdrGEAcpacqNMLFESIQEGKY-EFPEKdwahISCAAK 262
                       170       180
                ....*....|....*....|....*
gi 14165272 484 QLVRALLQREASKRPSarvAANVLH 508
Cdd:cd14173 263 DLISKLLVRDAKQRLS---AAQVLQ 284
STKc_BMPR1 cd14144
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type I Receptor; ...
307-446 2.16e-09

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type I Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1 functions as a receptor for morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Vertebrates contain two type I BMP receptors, BMPR1a and BMPR1b. BMPR1 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that also includes TGFbeta, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271046 [Multi-domain]  Cd Length: 287  Bit Score: 58.64  E-value: 2.16e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 307 GLGHGRTLFLVMKNYPC-TLRQYLCVNTPSPRLAAMMLLQLLEGVDHL-----VQQG---IAHRDLKSDNILVELDPDGC 377
Cdd:cd14144  61 GTGSWTQLYLITDYHENgSLYDFLRGNTLDTQSMLKLAYSAACGLAHLhteifGTQGkpaIAHRDIKSKNILVKKNGTCC 140
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 378 pwlvIADFGccLA----DESIGLQLPFSSwyvdRGGNGCLMAPEVSTARPGPRAVIDYSKADAWAVGAIAYEI 446
Cdd:cd14144 141 ----IADLG--LAvkfiSETNEVDLPPNT----RVGTKRYMAPEVLDESLNRNHFDAYKMADMYSFGLVLWEI 203
STKc_MSK1_N cd05613
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
350-497 3.95e-09

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270764 [Multi-domain]  Cd Length: 290  Bit Score: 58.09  E-value: 3.95e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFgccladesiGLQLPFSSWYVDRGGNGC----LMAPEVstARPGP 425
Cdd:cd05613 118 LEHLHKLGIIYRDIKLENIL--LDSSG--HVVLTDF---------GLSKEFLLDENERAYSFCgtieYMAPEI--VRGGD 182
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 426 RAvidYSKA-DAWAVGAIAYEIFGLVNPFY--GQGKAHLE-SRSYQEAQlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05613 183 SG---HDKAvDWWSLGVLMYELLTGASPFTvdGEKNSQAEiSRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKR 254
STKc_PASK cd14004
Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs ...
349-500 4.32e-09

Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PASK (or PASKIN) is a nutrient and energy sensor and thus, plays an important role in maintaining cellular energy homeostasis. It coordinates the utilization of glucose in response to metabolic demand. It contains an N-terminal PAS domain which directly interacts and inhibits a C-terminal catalytic kinase domain. The PAS domain serves as a sensory module for different environmental signals such as light, redox state, and various metabolites. Binding of ligands to the PAS domain causes structural changes which leads to kinase activation and the phosphorylation of substrates to trigger the appropriate cellular response. The PASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270906 [Multi-domain]  Cd Length: 256  Bit Score: 57.40  E-value: 4.32e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCPWLViaDFGccladesiglqlpfSSWYVDRG------GNGCLMAPEVSTAR 422
Cdd:cd14004 121 AVKHLHDQGIVHRDIKDENVI--LDGNGTIKLI--DFG--------------SAAYIKSGpfdtfvGTIDYAAPEVLRGN 182
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 P--GPravidysKADAWAVGAIAYEIFGLVNPFYgqgkahlESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14004 183 PygGK-------EQDIWALGVLLYTLVFKENPFY-------NIEEILEADLRI-PYAVSEDLIDLISRMLNRDVGDRPTI 247
STKc_BRSK1_2 cd14081
Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the ...
349-497 4.35e-09

Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BRSK1, also called SAD-B or SAD1 (Synapses of Amphids Defective homolog 1), and BRSK2, also called SAD-A, are highly expressed in mammalian forebrain. They play important roles in establishing neuronal polarity. BRSK1/2 double knock-out mice die soon after birth, showing thin cerebral cortices due to disordered subplate layers and neurons that lack distinct axons and dendrites. BRSK1 regulates presynaptic neurotransmitter release. Its activity fluctuates during cell cysle progression and it acts as a regulator of centrosome duplication. BRSK2 is also abundant in pancreatic islets, where it is involved in the regulation of glucose-stimulated insulin secretion. The BRSK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270983 [Multi-domain]  Cd Length: 255  Bit Score: 57.65  E-value: 4.35e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccLAdesiGLQlPFSSWYVDRGGNGCLMAPEVSTARPgprav 428
Cdd:cd14081 113 ALDYCHSHSICHRDLKPENLL--LDEKNN--IKIADFG--MA----SLQ-PEGSLLETSCGSPHYACPEVIKGEK----- 176
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 429 IDYSKADAWAVGAIAYEIfgLVN--PFYGQGKAHLESRSYQEAqlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14081 177 YDGRKADIWSCGVILYAL--LVGalPFDDDNLRQLLEKVKRGV--FHIPHFISPDAQDLLRRMLEVNPEKR 243
STKc_ULK1 cd14202
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the ...
353-497 4.70e-09

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. It associates with three autophagy-related proteins (Atg13, FIP200 amd Atg101) to form the ULK1 complex. All fours proteins are essential for autophagosome formation. ULK1 is regulated by both mammalian target-of rapamycin complex 1 (mTORC1) and AMP-activated protein kinase (AMPK). mTORC1 negatively regulates the ULK1 complex in a nutrient-dependent manner while AMPK stimulates autophagy by inhibiting mTORC1. ULK1 also plays neuron-specific roles and is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, neurite extension, and axon branching. The ULK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271104 [Multi-domain]  Cd Length: 267  Bit Score: 57.71  E-value: 4.70e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 353 LVQQGIAHRDLKSDNILV------ELDPDGCPwLVIADFGCC--LADESIGLQLPFSSWYvdrggngclMAPEVSTARpg 424
Cdd:cd14202 117 LHSKGIIHRDLKPQNILLsysggrKSNPNNIR-IKIADFGFAryLQNNMMAATLCGSPMY---------MAPEVIMSQ-- 184
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 praviDY-SKADAWAVGAIAYEIFglvnpfygQGKAHLESRSYQEAQL---------PALPESVPPDVRQLVRALLQREA 494
Cdd:cd14202 185 -----HYdAKADLWSIGTIIYQCL--------TGKAPFQASSPQDLRLfyeknkslsPNIPRETSSHLRQLLLGLLQRNQ 251

                ...
gi 14165272 495 SKR 497
Cdd:cd14202 252 KDR 254
STKc_SBK1 cd13987
Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the ...
350-500 4.74e-09

Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SBK1, also called BSK146, is predominantly expressed in the brain. Its expression is increased in the developing brain during the late embryonic stage, coinciding with dramatic neuronal proliferation, migration, and maturation. SBK1 may play an important role in regulating brain development. The SBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270889 [Multi-domain]  Cd Length: 259  Bit Score: 57.33  E-value: 4.74e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVeLDPDgCPWLVIADFGcclADESIGLQLPFSSwyvdrGGNGClMAPEVSTARPGPRAVI 429
Cdd:cd13987 104 LDFMHSKNLVHRDIKPENVLL-FDKD-CRRVKLCDFG---LTRRVGSTVKRVS-----GTIPY-TAPEVCEAKKNEGFVV 172
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 430 DYSkADAWAVGAIayeIFGLVNPFYGQGKAHLESRSYQE------AQLPALP---ESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd13987 173 DPS-IDVWAFGVL---LFCCLTGNFPWEKADSDDQFYEEfvrwqkRKNTAVPsqwRRFTPKALRMFKKLLAPEPERRCSI 248
STKc_CaMKI_alpha cd14167
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
348-497 6.39e-09

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271069 [Multi-domain]  Cd Length: 263  Bit Score: 56.96  E-value: 6.39e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNIL-VELDPDGcpWLVIADFGCCLADESiglqlpfSSWYVDRGGNGCLMAPEVSTARPgpr 426
Cdd:cd14167 112 DAVKYLHDMGIVHRDLKPENLLyYSLDEDS--KIMISDFGLSKIEGS-------GSVMSTACGTPGYVAPEVLAQKP--- 179
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 427 avidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLES---RSYQEAQLPALpESVPPDVRQLVRALLQREASKR 497
Cdd:cd14167 180 ----YSKAvDCWSIGVIAYILLCGYPPFYDENDAKLFEqilKAEYEFDSPYW-DDISDSAKDFIQHLMEKDPEKR 249
STKc_obscurin_rpt1 cd14107
Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
348-500 6.94e-09

Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271009 [Multi-domain]  Cd Length: 257  Bit Score: 56.82  E-value: 6.94e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDGCPwLVIADFGccLADESIGLQLPFSSWyvdrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd14107 109 EGIGYLHGMNILHLDIKPDNILM-VSPTRED-IKICDFG--FAQEITPSEHQFSKY-----GSPEFVAPEIVHQEPVSAA 179
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 428 vidyskADAWAVGAIAYEIFGLVNPFYGQG-KAHL----ESRSYQEAQLPAlpeSVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14107 180 ------TDIWALGVIAYLSLTCHSPFAGENdRATLlnvaEGVVSWDTPEIT---HLSEDAKDFIKRVLQPDPEKRPSA 248
STKc_MAK_like cd07830
Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs ...
348-501 7.01e-09

Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia, suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270824 [Multi-domain]  Cd Length: 283  Bit Score: 57.16  E-value: 7.01e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVEldPDGCpwLVIADFGccLADEsIGLQLPFSS-----WYvdRggngclmAPEVSTAR 422
Cdd:cd07830 110 QGLAHIHKHGFFHRDLKPENLLVS--GPEV--VKIADFG--LARE-IRSRPPYTDyvstrWY--R-------APEILLRS 173
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 PgpraviDYSKA-DAWAVGAIAYEIFGL---------VNPFY------GQGKAHLESRSYQEAQ-----LPALPE----- 476
Cdd:cd07830 174 T------SYSSPvDIWALGCIMAELYTLrplfpgsseIDQLYkicsvlGTPTKQDWPEGYKLASklgfrFPQFAPtslhq 247
                       170       180
                ....*....|....*....|....*...
gi 14165272 477 ---SVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd07830 248 lipNASPEAIDLIKDMLRWDPKKRPTAS 275
STKc_Trio_C cd14113
C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide ...
348-503 1.23e-08

C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide Exchange Factor, Triple functional domain protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Triple functional domain protein (Trio), also called PTPRF-interacting protein, is a large multidomain protein containing a series of spectrin-like repeats, two each of RhoGEF and SH3 domains, an immunoglobulin-like (Ig) domain and a C-terminal kinase. Trio plays important roles in neuronal cell migration and axon guidance. It was originally identified as an interacting partner of the of the receptor-like tyrosine phosphatase (RPTP) LAR (leukocyte-antigen-related protein), a family of receptors that function in the signaling to the actin cytoskeleton during development. Trio functions as a GEF for Rac1, RhoG, and RhoA, and is involved in the regulation of lamellipodia formation, mediating Rac1-dependent cell spreading and migration. The Trio subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271015 [Multi-domain]  Cd Length: 263  Bit Score: 56.14  E-value: 1.23e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGcPWLVIADFGccladESIGLQlpfSSWYVDR-GGNGCLMAPEVSTARPgpr 426
Cdd:cd14113 114 EALQYLHNCRIAHLDLKPENILVDQSLSK-PTIKLADFG-----DAVQLN---TTYYIHQlLGSPEFAAPEIILGNP--- 181
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 427 avIDYSkADAWAVGAIAYEIFGLVNPFYGQgkahlesrSYQEAQLPA--LPESVPPD--------VRQLVRALLQREASK 496
Cdd:cd14113 182 --VSLT-SDLWSIGVLTYVLLSGVSPFLDE--------SVEETCLNIcrLDFSFPDDyfkgvsqkAKDFVCFLLQMDPAK 250

                ....*..
gi 14165272 497 RPSARVA 503
Cdd:cd14113 251 RPSAALC 257
STKc_SGK1 cd05602
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
358-501 1.40e-08

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. The SGK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270753 [Multi-domain]  Cd Length: 339  Bit Score: 56.95  E-value: 1.40e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPRAVidyskaDAW 437
Cdd:cd05602 129 IVYRDLKPENIL--LDSQG--HIVLTDFGLC--KENIEPNGTTSTFC----GTPEYLAPEVLHKQPYDRTV------DWW 192
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 438 AVGAIAYEIFGLVNPFYGQGKAHLESRSYQEaqlpalPESVPPDV----RQLVRALLQREASKRPSAR 501
Cdd:cd05602 193 CLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNItnsaRHLLEGLLQKDRTKRLGAK 254
STKc_EIF2AK cd13996
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
348-501 1.41e-08

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: General Control Non-derepressible-2 (GCN2) which is activated during amino acid or serum starvation; protein kinase regulated by RNA (PKR) which is activated by double stranded RNA; heme-regulated inhibitor kinase (HRI) which is activated under heme-deficient conditions; and PKR-like endoplasmic reticulum kinase (PERK) which is activated when misfolded proteins accumulate in the ER. The EIF2AK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270898 [Multi-domain]  Cd Length: 273  Bit Score: 56.15  E-value: 1.41e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGcpwLVIADFGccLAdESIGLQLPFSSWYVDRGGNG----------CL-MAP 416
Cdd:cd13996 118 KGVSYIHSKGIVHRDLKPSNIFLDNDDLQ---VKIGDFG--LA-TSIGNQKRELNNLNNNNNGNtsnnsvgigtPLyASP 191
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 417 EVstarpgpRAVIDY-SKADAWAVGAIAYEIfglvnpFYGQGKAHLESRSYQEAQLPALPESV---PPDVRQLVRALLQR 492
Cdd:cd13996 192 EQ-------LDGENYnEKADIYSLGIILFEM------LHPFKTAMERSTILTDLRNGILPESFkakHPKEADLIQSLLSK 258

                ....*....
gi 14165272 493 EASKRPSAR 501
Cdd:cd13996 259 NPEERPSAE 267
STKc_TSSK-like cd14080
Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs ...
348-499 1.86e-08

Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. TSSK6, also called SSTK, is expressed at the head of elongated sperm. TSSK1/TSSK2 double knock-out and TSSK6 null mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270982 [Multi-domain]  Cd Length: 262  Bit Score: 55.65  E-value: 1.86e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFG---CCLADESIGLqlpfSSWYVdrgGNGCLMAPEVSTARPg 424
Cdd:cd14080 113 LAVQYLHSLDIAHRDLKCENIL--LDSNNN--VKLSDFGfarLCPDDDGDVL----SKTFC---GSAAYAAPEILQGIP- 180
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 425 pravIDYSKADAWAVGAIAYeIfgLVN---PFYGQG-KAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14080 181 ----YDPKKYDIWSLGVILY-I--MLCgsmPFDDSNiKKMLKDQQNRKVRFPSSVKKLSPECKDLIDQLLEPDPTKRAT 252
STKc_SGK2 cd05603
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; ...
350-501 2.00e-08

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK2 shows a more restricted distribution than SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. The SGK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270754 [Multi-domain]  Cd Length: 321  Bit Score: 56.13  E-value: 2.00e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPRAVi 429
Cdd:cd05603 109 IGYLHSLNIIYRDLKPENIL--LDCQG--HVVLTDFGLC--KEGMEPEETTSTFC----GTPEYLAPEVLRKEPYDRTV- 177
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 430 dyskaDAWAVGAIAYEIFGLVNPFYGQGKAHL-ESRSYQEAQLPALPESVPPDvrqLVRALLQREASKRPSAR 501
Cdd:cd05603 178 -----DWWCLGAVLYEMLYGLPPFYSRDVSQMyDNILHKPLHLPGGKTVAACD---LLQGLLHKDQRRRLGAK 242
STKc_CaMKI cd14083
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
348-461 2.42e-08

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270985 [Multi-domain]  Cd Length: 259  Bit Score: 55.46  E-value: 2.42e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDGCPWLVIADFGCCLADESIGLqlpfsswyvdrgGNGC----LMAPEVSTARP 423
Cdd:cd14083 112 EAVDYLHSLGIVHRDLKPENLLY-YSPDEDSKIMISDFGLSKMEDSGVM------------STACgtpgYVAPEVLAQKP 178
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 14165272 424 gpravidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHL 461
Cdd:cd14083 179 -------YGKAvDCWSIGVISYILLCGYPPFYDENDSKL 210
STKc_Bck1_like cd06629
Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein ...
348-501 2.68e-08

Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The Bck1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270799 [Multi-domain]  Cd Length: 270  Bit Score: 55.47  E-value: 2.68e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVelDPDG-CPwlvIADFGCCLADESIglqlpfsswYVDRGGN---GCL--MAPEV-ST 420
Cdd:cd06629 119 DGLAYLHSKGILHRDLKADNILV--DLEGiCK---ISDFGISKKSDDI---------YGNNGATsmqGSVfwMAPEViHS 184
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 421 ARPGpravidYS-KADAWAVGAIAYEIFGLVNPFygqGKAHLESRSY---QEAQLPALPESV--PPDVRQLVRALLQREA 494
Cdd:cd06629 185 QGQG------YSaKVDIWSLGCVVLEMLAGRRPW---SDDEAIAAMFklgNKRSAPPVPEDVnlSPEALDFLNACFAIDP 255

                ....*..
gi 14165272 495 SKRPSAR 501
Cdd:cd06629 256 RDRPTAA 262
STKc_Nek6_7 cd08224
Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related ...
349-506 2.75e-08

Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related kinase 6 and 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Nek6/7 is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270863 [Multi-domain]  Cd Length: 262  Bit Score: 55.35  E-value: 2.75e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADfgccladesIGLQLPFSS------------WYvdrggngclMAP 416
Cdd:cd08224 116 ALEHMHSKRIMHRDIKPANVFITANGV----VKLGD---------LGLGRFFSSkttaahslvgtpYY---------MSP 173
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 417 EVSTARPgpravidYS-KADAWAVGAIAYEIFGLVNPFYGQGK------AHLESRSYqeaqlPALP-ESVPPDVRQLVRA 488
Cdd:cd08224 174 ERIREQG-------YDfKSDIWSLGCLLYEMAALQSPFYGEKMnlyslcKKIEKCEY-----PPLPaDLYSQELRDLVAA 241
                       170
                ....*....|....*...
gi 14165272 489 LLQREASKRPSARVAANV 506
Cdd:cd08224 242 CIQPDPEKRPDISYVLDV 259
STKc_Nek3 cd08219
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
349-500 3.09e-08

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173759 [Multi-domain]  Cd Length: 255  Bit Score: 54.98  E-value: 3.09e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGcclADESIGLQLPFSSWYVdrgGNGCLMAPEVSTARPgprav 428
Cdd:cd08219 112 GVQHIHEKRVLHRDIKSKNIFLTQNGK----VKLGDFG---SARLLTSPGAYACTYV---GTPYYVPPEIWENMP----- 176
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 429 idY-SKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPaLPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd08219 177 --YnNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP-LPSHYSYELRSLIKQMFKRNPRSRPSA 246
STKc_MAPKAPK cd14089
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated ...
350-499 3.14e-08

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPK-activated protein kinases MK2, MK3, MK5 (also called PRAK for p38-regulated/activated protein kinase), and related proteins. These proteins contain a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. In addition, MK2 and MK3 contain an N-terminal proline-rich region that can bind to SH3 domains. MK2 and MK3 are bonafide substrates for the MAPK p38, while MK5 plays a functional role in the p38 MAPK pathway although their direct interaction has been difficult to detect. MK2 and MK3 are closely related and show, thus far, indistinguishable substrate specificity, while MK5 shows a distinct spectrum of substrates. MK2 and MK3 are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270991 [Multi-domain]  Cd Length: 263  Bit Score: 54.99  E-value: 3.14e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFGccLADESIG---LQLP-FSSWYVdrggngclmAPEVStarpGP 425
Cdd:cd14089 113 VAHLHSMNIAHRDLKPENLLYSSKGPNAI-LKLTDFG--FAKETTTkksLQTPcYTPYYV---------APEVL----GP 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 426 RAvidYSKA-DAWAVGAIAYEIFGLVNPFYGQG--------KAHLESRSYqeaQLPAlPE--SVPPDVRQLVRALLQREA 494
Cdd:cd14089 177 EK---YDKScDMWSLGVIMYILLCGYPPFYSNHglaispgmKKRIRNGQY---EFPN-PEwsNVSEEAKDLIRGLLKTDP 249

                ....*
gi 14165272 495 SKRPS 499
Cdd:cd14089 250 SERLT 254
STKc_TGFbR_I cd14056
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type ...
357-446 3.41e-08

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type I Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of type I receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation through trans-phosphorylation by type II receptors, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. They are inhibited by the immunophilin FKBP12, which is thought to control leaky signaling caused by receptor oligomerization in the absence of ligand. The TGFbR-I subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270958 [Multi-domain]  Cd Length: 287  Bit Score: 54.97  E-value: 3.41e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVELDPDGCpwlvIADFGCCLADESIGLQLPFSSWYvdRGGNGCLMAPEVSTARPGPRAVIDYSKADA 436
Cdd:cd14056 120 AIAHRDLKSKNILVKRDGTCC----IADLGLAVRYDSDTNTIDIPPNP--RVGTKRYMAPEVLDDSINPKSFESFKMADI 193
                        90
                ....*....|
gi 14165272 437 WAVGAIAYEI 446
Cdd:cd14056 194 YSFGLVLWEI 203
STKc_RSK_N cd05582
N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; ...
349-497 3.51e-08

N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270734 [Multi-domain]  Cd Length: 317  Bit Score: 55.48  E-value: 3.51e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccLADESIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPRAv 428
Cdd:cd05582 109 ALDHLHSLGIIYRDLKPENIL--LDEDG--HIKLTDFG--LSKESIDHEKKAYSFC----GTVEYMAPEVVNRRGHTQS- 177
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 429 idyskADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQeAQLpALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05582 178 -----ADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK-AKL-GMPQFLSPEAQSLLRALFKRNPANR 239
STKc_PKB_beta cd05595
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); ...
350-497 3.79e-08

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain.The PKB-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173686 [Multi-domain]  Cd Length: 323  Bit Score: 55.40  E-value: 3.79e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARpgpravi 429
Cdd:cd05595 108 LEYLHSRDVVYRDIKLENLM--LDKDG--HIKITDFGLC--KEGITDGATMKTFC----GTPEYLAPEVLEDN------- 170
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 430 DYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHL-ESRSYQEAQlpaLPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05595 171 DYGRAvDWWGLGVVMYEMMCGRLPFYNQDHERLfELILMEEIR---FPRTLSPEAKSLLAGLLKKDPKQR 237
STKc_CaMKI_beta cd14169
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
348-497 4.47e-08

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271071 [Multi-domain]  Cd Length: 277  Bit Score: 54.90  E-value: 4.47e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVElDPDGCPWLVIADFGCCLADESIGLQLPFsswyvdrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd14169 112 QAVKYLHQLGIVHRDLKPENLLYA-TPFEDSKIMISDFGLSKIEAQGMLSTAC--------GTPGYVAPELLEQKPYGKA 182
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 428 VidyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLES---RSYQEAQLPALpESVPPDVRQLVRALLQREASKR 497
Cdd:cd14169 183 V------DVWAIGVISYILLCGYPPFYDENDSELFNqilKAEYEFDSPYW-DDISESAKDFIRHLLERDPEKR 248
PK_Tyr_Ser-Thr pfam07714
Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role ...
348-501 4.59e-08

Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyze the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyze the reverse process. Protein kinases fall into three broad classes, characterized with respect to substrate specificity; Serine/threonine-protein kinases, tyrosine-protein kinases, and dual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins). This entry represents the catalytic domain found in a number of serine/threonine- and tyrosine-protein kinases. It does not include the catalytic domain of dual specificity kinases.


Pssm-ID: 462242 [Multi-domain]  Cd Length: 258  Bit Score: 54.42  E-value: 4.59e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272   348 EGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLV-IADFGccLADesigLQLPFSSWYVDRGGNGCL--MAPEvstarpg 424
Cdd:pfam07714 113 KGMEYLESKNFVHRDLAARNCLVSENL-----VVkISDFG--LSR----DIYDDDYYRKRGGGKLPIkwMAPE------- 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272   425 praVIDY----SKADAWAVGAIAYEIFGL-VNPFYGQGKAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRPS 499
Cdd:pfam07714 175 ---SLKDgkftSKSDVWSFGVLLWEIFTLgEQPYPGMSNEEVLEFLEDGYRLPQ-PENCPDELYDLMKQCWAYDPEDRPT 250

                  ..
gi 14165272   500 AR 501
Cdd:pfam07714 251 FS 252
STKc_Nek8 cd08220
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
349-498 4.68e-08

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Nek8 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270859 [Multi-domain]  Cd Length: 256  Bit Score: 54.35  E-value: 4.68e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVeldpDGCPWLV-IADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEVSTARPgpra 427
Cdd:cd08220 113 ALHHVHSKQILHRDLKTQNILL----NKKRTVVkIGDFG-------ISKILSSKSKAYTVVGTPCYISPELCEGKP---- 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 vidYS-KADAWAVGAIAYEIFGLvnpfygqgkahleSRSYQEAQLPAL------------PESVPPDVRQLVRALLQREA 494
Cdd:cd08220 178 ---YNqKSDIWALGCVLYELASL-------------KRAFEAANLPALvlkimrgtfapiSDRYSEELRHLILSMLHLDP 241

                ....
gi 14165272 495 SKRP 498
Cdd:cd08220 242 NKRP 245
STKc_PAK cd06614
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the ...
348-500 5.14e-08

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270789 [Multi-domain]  Cd Length: 255  Bit Score: 54.14  E-value: 5.14e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladesigLQL-------------PFssWyvdrggngclM 414
Cdd:cd06614 108 QGLEYLHSQNVIHRDIKSDNILLSKDGS----VKLADFGFA-------AQLtkekskrnsvvgtPY--W----------M 164
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 415 APEVSTARpgpraviDYS-KADAWAVGAIAYE-IFGlvNPFYgqgkahlesrsYQEAQLPAL-------------PESVP 479
Cdd:cd06614 165 APEVIKRK-------DYGpKVDIWSLGIMCIEmAEG--EPPY-----------LEEPPLRALflittkgipplknPEKWS 224
                       170       180
                ....*....|....*....|.
gi 14165272 480 PDVRQLVRALLQREASKRPSA 500
Cdd:cd06614 225 PEFKDFLNKCLVKDPEKRPSA 245
STKc_ACVR1_ALK1 cd14142
Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin ...
314-504 5.50e-08

Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR1, also called Activin receptor-Like Kinase 2 (ALK2), and ALK1 act as receptors for bone morphogenetic proteins (BMPs) and they activate SMAD1/5/8. ACVR1 is widely expressed while ALK1 is limited mainly to endothelial cells. The specificity of BMP binding to type I receptors is affected by type II receptors. ACVR1 binds BMP6/7/9/10 and can also bind anti-Mullerian hormone (AMH) in the presence of AMHR2. ALK1 binds BMP9/10 as well as TGFbeta in endothelial cells. A missense mutation in the GS domain of ACVR1 causes fibrodysplasia ossificans progressiva, a complex and disabling disease characterized by congenital skeletal malformations and extraskeletal bone formation. ACVR1 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like ACVR1 and ALK1, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The ACVR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271044 [Multi-domain]  Cd Length: 298  Bit Score: 54.75  E-value: 5.50e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 314 LFLVMKNYPC-TLRQYLCVNTPSPRLAAMMLLQLLEGVDHL-----VQQG---IAHRDLKSDNILVEldpdgcpwlviAD 384
Cdd:cd14142  78 LWLITHYHENgSLYDYLQRTTLDHQEMLRLALSAASGLVHLhteifGTQGkpaIAHRDLKSKNILVK-----------SN 146
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 385 FGCCLADESIGLQLPFSSWYVDRGGNGCL-----MAPEVSTARPGPRAVIDYSKADAWAVGAIAYEIF------GLVN-- 451
Cdd:cd14142 147 GQCCIADLGLAVTHSQETNQLDVGNNPRVgtkryMAPEVLDETINTDCFESYKRVDIYAFGLVLWEVArrcvsgGIVEey 226
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 452 --PFY---GQGKAHLESRSY--QEAQLPALPESVPPDVRQLVRALLQREA-SKRPSARVAA 504
Cdd:cd14142 227 kpPFYdvvPSDPSFEDMRKVvcVDQQRPNIPNRWSSDPTLTAMAKLMKECwYQNPSARLTA 287
STKc_CDK4_6_like cd07838
Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; ...
271-505 5.82e-08

Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinases activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270831 [Multi-domain]  Cd Length: 287  Bit Score: 54.59  E-value: 5.82e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLraftssvpllpgalvdypDVLpsrlHPEGLGHGRTLFLVMKNYPCTLRQYLcVNTP----SPRLAAMMLLQL 346
Cdd:cd07838  60 HPNVVRLL------------------DVC----HGPRTDRELKLTLVFEHVDQDLATYL-DKCPkpglPPETIKDLMRQL 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 347 LEGVDHLVQQGIAHRDLKSDNILVELDpdgcpWLV-IADFGccLAdESIGLQLPFSS-----WYvdRggngclmAPEV-- 418
Cdd:cd07838 117 LRGLDFLHSHRIVHRDLKPQNILVTSD-----GQVkLADFG--LA-RIYSFEMALTSvvvtlWY--R-------APEVll 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 419 --STARPgpravidyskADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQ------EAQLPAL--------PESVPPDV 482
Cdd:cd07838 180 qsSYATP----------VDMWSVGCIFAELFNRRPLFRGSSEADQLGKIFDviglpsEEEWPRNsalprssfPSYTPRPF 249
                       250       260       270
                ....*....|....*....|....*....|....
gi 14165272 483 RQLVRA-------LLQR----EASKRPSARVAAN 505
Cdd:cd07838 250 KSFVPEideegldLLKKmltfNPHKRISAFEALQ 283
STKc_DMPK_like cd05597
Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases; ...
350-492 6.19e-08

Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. Three isoforms of MRCK are known, named alpha, beta and gamma. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270748 [Multi-domain]  Cd Length: 331  Bit Score: 54.66  E-value: 6.19e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGLQlpFSSWYVdrgGNGCLMAPEVSTARPGPRAVi 429
Cdd:cd05597 115 IDSIHQLGYVHRDIKPDNVL--LDRNG--HIRLADFGSCLKLREDGTV--QSSVAV---GTPDYISPEILQAMEDGKGR- 184
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 430 dYSK-ADAWAVGAIAYEIFGLVNPFYGQGKAHLESR--SYQEA-QLPALPESVPPDVRQLVRALLQR 492
Cdd:cd05597 185 -YGPeCDWWSLGVCMYEMLYGETPFYAESLVETYGKimNHKEHfSFPDDEDDVSEEAKDLIRRLICS 250
STKc_MEKK4 cd06626
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
348-500 6.23e-08

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK4 is a MAPK kinase kinase that phosphorylates and activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270796 [Multi-domain]  Cd Length: 265  Bit Score: 54.23  E-value: 6.23e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCC--LADESIGL-QLPFSSWyvdrGGNGCLMAPEVSTarpG 424
Cdd:cd06626 110 EGLAYLHENGIVHRDIKPANIF--LDSNGL--IKLGDFGSAvkLKNNTTTMaPGEVNSL----VGTPAYMAPEVIT---G 178
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 PRAVIDYSKADAWAVGAIAYEIFGLVNPFYgqgkaHLESR---SYQEAQL--PALPES--VPPDVRQLVRALLQREASKR 497
Cdd:cd06626 179 NKGEGHGRAADIWSLGCVVLEMATGKRPWS-----ELDNEwaiMYHVGMGhkPPIPDSlqLSPEGKDFLSRCLESDPKKR 253

                ...
gi 14165272 498 PSA 500
Cdd:cd06626 254 PTA 256
STKc_CaMKI_delta cd14168
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
348-504 6.36e-08

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271070 [Multi-domain]  Cd Length: 301  Bit Score: 54.67  E-value: 6.36e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDGCPWLVIADFGCCLAdESIGLQLPFSSwyvdrgGNGCLMAPEVSTARPgpra 427
Cdd:cd14168 119 DAVYYLHRMGIVHRDLKPENLLY-FSQDEESKIMISDFGLSKM-EGKGDVMSTAC------GTPGYVAPEVLAQKP---- 186
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 vidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALP--ESVPPDVRQLVRALLQREASKRPSARVAA 504
Cdd:cd14168 187 ---YSKAvDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKADYEFDSPywDDISDSAKDFIRNLMEKDPNKRYTCEQAL 263
STKc_nPKC_theta cd05619
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze ...
349-501 6.48e-08

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270770 [Multi-domain]  Cd Length: 331  Bit Score: 54.54  E-value: 6.48e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPRAV 428
Cdd:cd05619 118 GLQFLHSKGIVYRDLKLDNIL--LDKDG--HIKIADFGMC--KENMLGDAKTSTFC----GTPDYIAPEILLGQKYNTSV 187
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 429 idyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLesrsYQEAQL--PALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd05619 188 ------DWWSFGVLLYEMLIGQSPFHGQDEEEL----FQSIRMdnPFYPRWLEKEAKDILVKLFVREPERRLGVR 252
STKc_Chk1 cd14069
Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the ...
348-442 6.83e-08

Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chk1 is implicated in many major checkpoints of the cell cycle, providing a link between upstream sensors and the cell cycle engine. It plays an important role in DNA damage response and maintaining genomic stability. Chk1 acts as an effector of the sensor kinase, ATR (ATM and Rad3-related), a member of the PI3K family, which is activated upon DNA replication stress. Chk1 delays mitotic entry in response to replication blocks by inhibiting cyclin dependent kinase (Cdk) activity. In addition, Chk1 contributes to the function of centrosome and spindle-based checkpoints, inhibits firing of origins of DNA replication (Ori), and represses transcription of cell cycle proteins including cyclin B and Cdk1. The Chk1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270971 [Multi-domain]  Cd Length: 261  Bit Score: 53.87  E-value: 6.83e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCC----------LADESIGlQLPFsswyvdrggngclMAPE 417
Cdd:cd14069 111 AGLKYLHSCGITHRDIKPENLL--LDENDN--LKISDFGLAtvfrykgkerLLNKMCG-TLPY-------------VAPE 172
                        90       100
                ....*....|....*....|....*
gi 14165272 418 VsTARPGPRAvidySKADAWAVGAI 442
Cdd:cd14069 173 L-LAKKKYRA----EPVDVWSCGIV 192
STKc_DCKL cd14095
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called ...
350-500 7.87e-08

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called Doublecortin-like and CAM kinase-like); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL (or DCAMKL) proteins belong to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL proteins contain a C-terminal kinase domain with similarity to CAMKs. They are involved in the regulation of cAMP signaling. Vertebrates contain three DCKL proteins (DCKL1-3); DCKL1 and 2 also contain a serine, threonine, and proline rich domain (SP), while DCKL3 contains only a single DCX domain instead of tandem domains. The DCKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270997 [Multi-domain]  Cd Length: 258  Bit Score: 53.87  E-value: 7.87e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGccLADESIGlqlPFSS-----WYVdrggngclmAPEVstarpg 424
Cdd:cd14095 111 LKYLHSLSIVHRDIKPENLLVVEHEDGSKSLKLADFG--LATEVKE---PLFTvcgtpTYV---------APEI------ 170
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pRAVIDYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLE-SRSYQEAQLPALP---ESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14095 171 -LAETGYGlKVDIWAAGVITYILLCGFPPFRSPDRDQEElFDLILAGEFEFLSpywDNISDSAKDLISRMLVVDPEKRYS 249

                .
gi 14165272 500 A 500
Cdd:cd14095 250 A 250
STKc_IRE1 cd13982
Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze ...
349-505 8.05e-08

Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRE1, also called Endoplasmic reticulum (ER)-to-nucleus signaling protein (or ERN), is an ER-localized type I transmembrane protein with kinase and endoribonuclease domains in the cytoplasmic side. It acts as an ER stress sensor and is the oldest and most conserved component of the unfolded protein response (UPR) in eukaryotes. The UPR is activated when protein misfolding is detected in the ER in order to decrease the synthesis of new proteins and increase the capacity of the ER to cope with the stress. During ER stress, IRE1 dimerizes and forms oligomers, allowing the kinase domain to undergo trans-autophosphorylation. This leads to a conformational change that stimulates its endoribonuclease activity and results in the cleavage of its mRNA substrate, HAC1 in yeast and XBP1 in metazoans, promoting a splicing event that enables translation into a transcription factor which activates the UPR. Mammals contain two IRE1 proteins, IRE1alpha (or ERN1) and IRE1beta (or ERN2). The Ire1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270884 [Multi-domain]  Cd Length: 269  Bit Score: 53.82  E-value: 8.05e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELD-PDGCPWLVIADFGCC--LADEsiglQLPFSSWYVDRGGNGcLMAPEV---STAR 422
Cdd:cd13982 111 GLAHLHSLNIVHRDLKPQNILISTPnAHGNVRAMISDFGLCkkLDVG----RSSFSRRSGVAGTSG-WIAPEMlsgSTKR 185
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 PGPRAVidyskaDAWAVGAIAYEIF-GLVNPFYG--QGKAHLESRSYQEAQLPALpESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd13982 186 RQTRAV------DIFSLGCVFYYVLsGGSHPFGDklEREANILKGKYSLDKLLSL-GEHGPEAQDLIERMIDFDPEKRPS 258

                ....*.
gi 14165272 500 ARVAAN 505
Cdd:cd13982 259 AEEVLN 264
STKc_MEKK3_like cd06625
Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) ...
348-500 8.14e-08

Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MEKK3, MEKK2, and related proteins; all contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKK) that activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270795 [Multi-domain]  Cd Length: 260  Bit Score: 53.90  E-value: 8.14e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCCLADESIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPRa 427
Cdd:cd06625 113 EGLAYLHSNMIVHRDIKGANIL--RDSNGN--VKLGDFGASKRLQTICSSTGMKSVT----GTPYWMSPEVINGEGYGR- 183
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 428 vidysKADAWAVGAIAYEIFGLVNPFYG-QGKAHLESRSYQEAQlPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06625 184 -----KADIWSVGCTVVEMLTTKPPWAEfEPMAAIFKIATQPTN-PQLPPHVSEDARDFLSLIFVRNKKQRPSA 251
PTKc_Jak_rpt2 cd05038
Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily ...
310-499 8.25e-08

Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. They are PTKs, catalyzing the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jaks are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. The Jak subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270634 [Multi-domain]  Cd Length: 284  Bit Score: 53.92  E-value: 8.25e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 310 HGRTLFLVMKNYPC-TLRQYLCVNTP--SPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDpdgcpWLV-IADF 385
Cdd:cd05038  79 GRRSLRLIMEYLPSgSLRDYLQRHRDqiDLKRLLLFASQICKGMEYLGSQRYIHRDLAARNILVESE-----DLVkISDF 153
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 386 GccLA------DESIGLQLPFSS---WYvdrggngclmAPE-VSTARpgpraviDYSKADAWAVGAIAYEIFGLVNPFY- 454
Cdd:cd05038 154 G--LAkvlpedKEYYYVKEPGESpifWY----------APEcLRESR-------FSSASDVWSFGVTLYELFTYGDPSQs 214
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 455 -------GQGKAHLESRSYQEAQ-------LPAlPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd05038 215 ppalflrMIGIAQGQMIVTRLLEllksgerLPR-PPSCPDEVYDLMKECWEYEPQDRPS 272
STKc_Nek1 cd08218
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
349-499 1.15e-07

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Nek1 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270858 [Multi-domain]  Cd Length: 256  Bit Score: 53.28  E-value: 1.15e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCC--------LADESIGlqlpfSSWYvdrggngclMAPEVST 420
Cdd:cd08218 113 ALKHVHDRKILHRDIKSQNIF--LTKDGI--IKLGDFGIArvlnstveLARTCIG-----TPYY---------LSPEICE 174
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 421 ARPgpravidYS-KADAWAVGAIAYEIFGLVNPFygqgkahlESRSYQEAQLPALPESVPP-------DVRQLVRALLQR 492
Cdd:cd08218 175 NKP-------YNnKSDIWALGCVLYEMCTLKHAF--------EAGNMKNLVLKIIRGSYPPvpsrysyDLRSLVSQLFKR 239

                ....*..
gi 14165272 493 EASKRPS 499
Cdd:cd08218 240 NPRDRPS 246
STKc_Nek4 cd08223
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
352-501 1.19e-07

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek4 is highly abundant in the testis. Its specific function is unknown. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270862 [Multi-domain]  Cd Length: 257  Bit Score: 53.21  E-value: 1.19e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 352 HLVQQGIAHRDLKSDNI-LVELDPDGCPWLVIA---DFGCCLADESIGlqlpfSSWYvdrggngclMAPEVSTARPgpra 427
Cdd:cd08223 117 YMHERNILHRDLKTQNIfLTKSNIIKVGDLGIArvlESSSDMATTLIG-----TPYY---------MSPELFSNKP---- 178
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 428 vidYS-KADAWAVGAIAYEIFGLVNPFYGQgkaHLESRSYQ--EAQLPALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd08223 179 ---YNhKSDVWALGCCVYEMATLKHAFNAK---DMNSLVYKilEGKLPPMPKQYSPELGELIKAMLHQDPEKRPSVK 249
STKc_GAK_like cd13985
Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of ...
266-500 1.28e-07

Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes cyclin G-Associated Kinase (GAK), Drosophila melanogaster Numb-Associated Kinase (NAK)-like proteins, and similar protein kinases. GAK plays regulatory roles in clathrin-mediated membrane trafficking, the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses. NAK plays a role in asymmetric cell division through its association with Numb. It also regulates the localization of Dlg, a protein essential for septate junction formation. The GAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270887 [Multi-domain]  Cd Length: 272  Bit Score: 53.11  E-value: 1.28e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIirvlraftssVPLLPGALVDYPDVlpsrlhPEGLghgrtlfLVMKNYPCTLRQYLCVNTPSP---RLAAMM 342
Cdd:cd13985  52 KRLCGHPNI----------VQYYDSAILSSEGR------KEVL-------LLMEYCPGSLVDILEKSPPSPlseEEVLRI 108
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 343 LLQLLEGVDHLVQQG--IAHRDLKSDNILVElDPDGCpwlVIADFG--------------CCLADESIGLqlpfsswyvd 406
Cdd:cd13985 109 FYQICQAVGHLHSQSppIIHRDIKIENILFS-NTGRF---KLCDFGsattehypleraeeVNIIEEEIQK---------- 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 407 rggNGCLM--APEVstARPGPRAVIDySKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYqeaQLPALPeSVPPDVRQ 484
Cdd:cd13985 175 ---NTTPMyrAPEM--IDLYSKKPIG-EKADIWALGCLLYKLCFFKLPFDESSKLAIVAGKY---SIPEQP-RYSPELHD 244
                       250
                ....*....|....*.
gi 14165272 485 LVRALLQREASKRPSA 500
Cdd:cd13985 245 LIRHMLTPDPAERPDI 260
Pkinase pfam00069
Protein kinase domain;
401-501 1.46e-07

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 52.25  E-value: 1.46e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272   401 SSWYvdrggngclMAPEVSTARPgpravidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSY-QEAQLPALPESV 478
Cdd:pfam00069 123 TPWY---------MAPEVLGGNP-------YGpKVDVWSLGCILYELLTGKPPFPGINGNEIYELIIdQPYAFPELPSNL 186
                          90       100
                  ....*....|....*....|...
gi 14165272   479 PPDVRQLVRALLQREASKRPSAR 501
Cdd:pfam00069 187 SEEAKDLLKKLLKKDPSKRLTAT 209
STKc_MAPKAPK5 cd14171
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
267-497 1.48e-07

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 5 (MAPKAP5 or MK5) is also called PRAK (p38-regulated/activated protein kinase). It contains a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271073 [Multi-domain]  Cd Length: 289  Bit Score: 53.23  E-value: 1.48e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 267 QLAPHPNIIRVLRAFTSSVpLLPGALVDYPDVLpsrLHPEGLGHGRTLFLVMKNYPCTLRQylcvntpsprlAAMMLLQL 346
Cdd:cd14171  54 MCSGHPNIVQIYDVYANSV-QFPGESSPRARLL---IVMELMEGGELFDRISQHRHFTEKQ-----------AAQYTKQI 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 347 LEGVDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFGccLADESIG-LQLP-FSSWYVdrggngclmAPEVSTAR-- 422
Cdd:cd14171 119 ALAVQHCHSLNIAHRDLKPENLLLKDNSEDAP-IKLCDFG--FAKVDQGdLMTPqFTPYYV---------APQVLEAQrr 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 --------PGPRAVIDYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPA---LPES----VPPDVRQLV 486
Cdd:cd14171 187 hrkersgiPTSPTPYTYDKScDMWSLGVIIYIMLCGYPPFYSEHPSRTITKDMKRKIMTGsyeFPEEewsqISEMAKDIV 266
                       250
                ....*....|.
gi 14165272 487 RALLQREASKR 497
Cdd:cd14171 267 RKLLCVDPEER 277
STKc_nPKC_theta_like cd05592
Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and ...
349-497 1.50e-07

Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. The nPKC-theta-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270744 [Multi-domain]  Cd Length: 320  Bit Score: 53.54  E-value: 1.50e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPRAV 428
Cdd:cd05592 108 GLQFLHSRGIIYRDLKLDNVL--LDREG--HIKIADFGMC--KENIYGENKASTFC----GTPDYIAPEILKGQKYNQSV 177
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 429 idyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAqlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05592 178 ------DWWSFGVLLYEMLIGQSPFHGEDEDELFWSICNDT--PHYPRWLTKEAASCLSLLLERNPEKR 238
PKc_Wee1_like cd13997
Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the ...
349-501 1.50e-07

Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity kinase Myt1, the protein tyrosine kinase Wee1, and similar proteins. These proteins are cell cycle checkpoint kinases that are involved in the regulation of cyclin-dependent kinase CDK1, the master engine for mitosis. CDK1 is kept inactivated through phosphorylation of N-terminal thr (T14 by Myt1) and tyr (Y15 by Myt1 and Wee1) residues. Mitosis progression is ensured through activation of CDK1 by dephoshorylation and inactivation of Myt1/Wee1. The Wee1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270899 [Multi-domain]  Cd Length: 252  Bit Score: 52.77  E-value: 1.50e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCCLADESIGLqlpfsswyvDRGGNGCLMAPEVSTARPGPRav 428
Cdd:cd13997 115 GLAFIHSKGIVHLDIKPDNIF--ISNKGT--CKIGDFGLATRLETSGD---------VEEGDSRYLAPELLNENYTHL-- 179
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 429 idySKADAWAVGAIAYE-IFGLVNPFYGQGkahleSRSYQEAQLPALPESV-PPDVRQLVRALLQREASKRPSAR 501
Cdd:cd13997 180 ---PKADIFSLGVTVYEaATGEPLPRNGQQ-----WQQLRQGKLPLPPGLVlSQELTRLLKVMLDPDPTRRPTAD 246
STKc_EIF2AK4_GCN2_rpt2 cd14046
Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation ...
348-501 1.57e-07

Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GCN2 (or EIF2AK4) is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. Its kinase domain is activated via conformational changes as a result of the binding of uncharged tRNA to the HisRS-like domain. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270948 [Multi-domain]  Cd Length: 278  Bit Score: 53.14  E-value: 1.57e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeldpDGCPWLVIADFGccLADES-----IGLQLPFSSWYVDRGGNGCL--------- 413
Cdd:cd14046 115 EGLAYIHSQGIIHRDLKPVNIFL----DSNGNVKIGDFG--LATSNklnveLATQDINKSTSAALGSSGDLtgnvgtaly 188
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 414 MAPEVSTarpGPRAVIDySKADAWAVGAIAYEifgLVNPFygqgkahleSRSYQEAQ-LPALPE---SVPPDVRQ----- 484
Cdd:cd14046 189 VAPEVQS---GTKSTYN-EKVDMYSLGIIFFE---MCYPF---------STGMERVQiLTALRSvsiEFPPDFDDnkhsk 252
                       170       180
                ....*....|....*....|
gi 14165272 485 ---LVRALLQREASKRPSAR 501
Cdd:cd14046 253 qakLIRWLLNHDPAKRPSAQ 272
STKc_PKA_like cd05580
Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs ...
351-497 1.75e-07

Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the cAMP-dependent protein kinases, PKA and PRKX, and similar proteins. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. PRKX is also reulated by the R subunit and is is present in many tissues including fetal and adult brain, kidney, and lung. It is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PKA-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270732 [Multi-domain]  Cd Length: 290  Bit Score: 52.97  E-value: 1.75e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 351 DHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccladesiglqlpFSSWYVDRGGNGC----LMAPEVSTARPGPR 426
Cdd:cd05580 115 EYLHSLDIVYRDLKPENLL--LDSDG--HIKITDFG-------------FAKRVKDRTYTLCgtpeYLAPEIILSKGHGK 177
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 427 AVidyskaDAWAVGAIAYEIFGLVNPFYGQG-----KAHLESRSYqeaqlpaLPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05580 178 AV------DWWALGILIYEMLAGYPPFFDENpmkiyEKILEGKIR-------FPSFFDPDAKDLIKRLLVVDLTKR 240
STKc_CDK8_like cd07842
Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs ...
348-471 1.75e-07

Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270834 [Multi-domain]  Cd Length: 316  Bit Score: 53.06  E-value: 1.75e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGccLA---DESigLQLPFSS-------WYvdRggngclmAPE 417
Cdd:cd07842 119 NGIHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLG--LArlfNAP--LKPLADLdpvvvtiWY--R-------APE 185
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 418 VSTarpGPRaviDYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQL 471
Cdd:cd07842 186 LLL---GAR---HYTKAiDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQL 234
STKc_PhKG cd14093
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs ...
266-503 2.28e-07

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). Each subunit has tissue-specific isoforms or splice variants. Vertebrates contain two isoforms of the gamma subunit (gamma 1 and gamma 2). The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270995 [Multi-domain]  Cd Length: 272  Bit Score: 52.36  E-value: 2.28e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIIRVLRAFTSSV------PLLP-GALVDYpdvLPSRLHpegLGHGRTLFLvmknypctLRQYLcvntpsprl 338
Cdd:cd14093  63 RQVSGHPNIIELHDVFESPTfiflvfELCRkGELFDY---LTEVVT---LSEKKTRRI--------MRQLF--------- 119
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 339 aammllqllEGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEV 418
Cdd:cd14093 120 ---------EAVEFLHSLNIVHRDLKPENIL--LDDNLN--VKISDFG-------FATRLDEGEKLRELCGTPGYLAPEV 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 419 STARPGPRAViDYSK-ADAWAVGAIAYEIFGLVNPFYGQgKAHLESRSYQEAQLP-ALPE--SVPPDVRQLVRALLQREA 494
Cdd:cd14093 180 LKCSMYDNAP-GYGKeVDMWACGVIMYTLLAGCPPFWHR-KQMVMLRNIMEGKYEfGSPEwdDISDTAKDLISKLLVVDP 257

                ....*....
gi 14165272 495 SKRPSARVA 503
Cdd:cd14093 258 KKRLTAEEA 266
STKc_LRRK cd14000
Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the ...
348-500 2.29e-07

Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. Vertebrates contain two members, LRRK1 and LRRK2, which show complementary expression in the brain. Mutations in LRRK2 are linked to both familial and sporadic forms of Parkinson's disease. The normal roles of LRRKs are not clearly defined. They may be involved in mitogen-activated protein kinase (MAPK) pathways, protein translation control, programmed cell death pathways, and cytoskeletal dynamics. The LRRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270902 [Multi-domain]  Cd Length: 275  Bit Score: 52.62  E-value: 2.29e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILV-ELDPDGCPWLVIADFGCCladesiglQLPFSSWYVDRGGNGCLMAPEVStarpgPR 426
Cdd:cd14000 123 DGLRYLHSAMIIYRDLKSHNVLVwTLYPNSAIIIKIADYGIS--------RQCCRMGAKGSEGTPGFRAPEIA-----RG 189
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 427 AVIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHlESRSYQEAQLPAL--PESVP-PDVRQLVRALLQREASKRPSA 500
Cdd:cd14000 190 NVIYNEKVDVFSFGMLLYEILSGGAPMVGHLKFP-NEFDIHGGLRPPLkqYECAPwPEVEVLMKKCWKENPQQRPTA 265
STKc_cPKC_beta cd05616
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs ...
349-497 2.30e-07

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG (1,2-diacylglycerol) in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG, and in most cases, phosphatidylserine (PS) for activation. The cPKC-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270767 [Multi-domain]  Cd Length: 323  Bit Score: 53.08  E-value: 2.30e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGLQLPFSSwyvdrgGNGCLMAPEVSTARPGPRAV 428
Cdd:cd05616 113 GLFFLQSKGIIYRDLKLDNVM--LDSEG--HIKIADFGMCKENIWDGVTTKTFC------GTPDYIAPEIIAYQPYGKSV 182
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 429 idyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLeSRSYQEAQLpALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05616 183 ------DWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEHNV-AYPKSMSKEAVAICKGLMTKHPGKR 243
STKc_JNK cd07850
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the ...
271-446 2.53e-07

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270840 [Multi-domain]  Cd Length: 337  Bit Score: 52.80  E-value: 2.53e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTSSvpllpGALVDYPDV----------LPSRLHPEgLGHGRTLFLvmknypctLRQYLCvntpsprlaa 340
Cdd:cd07850  58 HKNIIGLLNVFTPQ-----KSLEEFQDVylvmelmdanLCQVIQMD-LDHERMSYL--------LYQMLC---------- 113
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 341 mmllqlleGVDHLVQQGIAHRDLKSDNILVELDpdgCPwLVIADFGccLADESiglqlpfsswyvdrgGNGCLMAPEVST 420
Cdd:cd07850 114 --------GIKHLHSAGIIHRDLKPSNIVVKSD---CT-LKILDFG--LARTA---------------GTSFMMTPYVVT 164
                       170       180       190
                ....*....|....*....|....*....|
gi 14165272 421 ARPGPRAVI---DYS-KADAWAVGAIAYEI 446
Cdd:cd07850 165 RYYRAPEVIlgmGYKeNVDIWSVGCIMGEM 194
STKc_MAPKAPK3 cd14172
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
350-497 2.63e-07

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 3 (MAPKAP3 or MK3) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK3 is a bonafide substrate for the MAPK p38. It is closely related to MK2 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK3 activity is only significant when MK2 is absent. The MK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271074 [Multi-domain]  Cd Length: 267  Bit Score: 52.30  E-value: 2.63e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFGccLADESI---GLQLP-FSSWYVdrggngclmAPEVStarpGP 425
Cdd:cd14172 116 IQYLHSMNIAHRDVKPENLLYTSKEKDAV-LKLTDFG--FAKETTvqnALQTPcYTPYYV---------APEVL----GP 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 426 RaviDYSKA-DAWAVGAIAYEIFGLVNPFY---GQGKAHLESRSYQEAQ--LPAlPE--SVPPDVRQLVRALLQREASKR 497
Cdd:cd14172 180 E---KYDKScDMWSLGVIMYILLCGFPPFYsntGQAISPGMKRRIRMGQygFPN-PEwaEVSEEAKQLIRHLLKTDPTER 255
STKc_TSSK6-like cd14164
Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs ...
311-505 2.65e-07

Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK6, also called SSTK, is expressed at the head of elongated sperm. It can phosphorylate histones and associate with heat shock protens HSP90 and HSC70. Male mice deficient in TSSK6 are infertile, showing spermatogenic impairment including reduced sperm counts, impaired DNA condensation, abnormal morphology and decreased motility rates. The TSSK6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271066 [Multi-domain]  Cd Length: 256  Bit Score: 52.17  E-value: 2.65e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 311 GRTLFLVMKNYPCTLRQYLCVNTPSPRLAAMMLLQLLEG-VDHLVQQGIAHRDLKSDNILveLDPDGcPWLVIADFGCCL 389
Cdd:cd14164  73 NGRLYIVMEAAATDLLQKIQEVHHIPKDLARDMFAQMVGaVNYLHDMNIVHRDLKCENIL--LSADD-RKIKIADFGFAR 149
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 390 ADESiglqlpFSSWYVDRGGNGCLMAPEVSTARPgpravIDYSKADAWAVGAIAYEIFGLVNPFYGQ--GKAHLESRSYQ 467
Cdd:cd14164 150 FVED------YPELSTTFCGSRAYTPPEVILGTP-----YDPKKYDVWSLGVVLYVMVTGTMPFDETnvRRLRLQQRGVL 218
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 14165272 468 EAQLPALPESvppdVRQLVRALLQREASKRPSA-RVAAN 505
Cdd:cd14164 219 YPSGVALEEP----CRALIRTLLQFNPSTRPSIqQVAGN 253
STKc_DCKL3 cd14185
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called ...
348-501 2.68e-07

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called Doublecortin-like and CAM kinase-like 3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL3 (or DCAMKL3) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. DCKL3 contains a single DCX domain (instead of a tandem) and a C-terminal kinase domain with similarity to CAMKs. It has been shown to interact with tubulin and JIP1/2. The DCKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271087 [Multi-domain]  Cd Length: 258  Bit Score: 52.26  E-value: 2.68e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGccLADESIGLQLPFSswyvdrgGNGCLMAPEVSTARpgpra 427
Cdd:cd14185 109 EALVYIHSKHIVHRDLKPENLLVQHNPDKSTTLKLADFG--LAKYVTGPIFTVC-------GTPTYVAPEILSEK----- 174
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 viDYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLEsrSYQEAQ------LPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14185 175 --GYGlEVDMWAAGVILYILLCGFPPFRSPERDQEE--LFQIIQlghyefLPPYWDNISEAAKDLISRLLVVDPEKRYTA 250

                .
gi 14165272 501 R 501
Cdd:cd14185 251 K 251
STKc_MAST cd05609
Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine ...
349-506 2.83e-07

Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also called syntrophin-associated STK (SAST) while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270760 [Multi-domain]  Cd Length: 280  Bit Score: 52.41  E-value: 2.83e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVEldpdGCPWLVIADFGCcladESIGLQLPFSSWYVDRG-------------GNGCLMA 415
Cdd:cd05609 112 ALEYLHSYGIVHRDLKPDNLLIT----SMGHIKLTDFGL----SKIGLMSLTTNLYEGHIekdtrefldkqvcGTPEYIA 183
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 416 PEVsTARPGpravidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESR-SYQEAQLPALPESVPPDVRQLVRALLQRE 493
Cdd:cd05609 184 PEV-ILRQG------YGKPvDWWAMGIILYEFLVGCVPFFGDTPEELFGQvISDEIEWPEGDDALPDDAQDLITRLLQQN 256
                       170
                ....*....|...
gi 14165272 494 ASKRPSARVAANV 506
Cdd:cd05609 257 PLERLGTGGAEEV 269
STKc_STK33 cd14097
Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the ...
350-461 2.92e-07

Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK33 is highly expressed in the testis and is present in low levels in most tissues. It may be involved in spermatogenesis and organ ontogenesis. It interacts with and phosphorylates vimentin and may be involved in regulating intermediate filament cytoskeletal dynamics. Its role in promoting the cell viability of KRAS-dependent cancer cells is under debate; some studies have found STK33 to promote cancer cell viability, while other studies have found it to be non-essential. KRAS is the most commonly mutated human oncogene, thus, studies on the role of STK33 in KRAS mutant cancer cells are important. The STK33 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270999 [Multi-domain]  Cd Length: 266  Bit Score: 52.17  E-value: 2.92e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVE---LDPDGCPWLVIADFGCCLADESIGlqlpfSSWYVDRGGNGCLMAPEVSTARpgpr 426
Cdd:cd14097 113 VAYLHKNDIVHRDLKLENILVKssiIDNNDKLNIKVTDFGLSVQKYGLG-----EDMLQETCGTPIYMAPEVISAH---- 183
                        90       100       110
                ....*....|....*....|....*....|....*.
gi 14165272 427 aviDYSK-ADAWAVGAIAYEIFGLVNPFYGQGKAHL 461
Cdd:cd14097 184 ---GYSQqCDIWSIGVIMYMLLCGEPPFVAKSEEKL 216
STKc_MLCK cd14103
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase; STKs catalyze the ...
348-500 3.18e-07

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. In vertebrates, different MLCKs function in smooth (MLCK1), skeletal (MLCK2), and cardiac (MLCK3) muscles. A fourth protein, MLCK4, has also been identified through comprehensive genome analysis although it has not been biochemically characterized. The MLCK1 gene expresses three transcripts in a cell-specific manner: a short MLCK1 which contains three immunoglobulin (Ig)-like and one fibronectin type III (FN3) domains, PEVK and actin-binding regions, and a kinase domain near the C-terminus; a long MLCK1 containing six additional Ig-like domains at the N-terminus compared to the short MLCK1; and the C-terminal Ig module. MLCK2, MLCK3, and MLCK4 share a simpler domain architecture of a single kinase domain near the C-terminus and the absence of Ig-like or FN3 domains. The MLCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271005 [Multi-domain]  Cd Length: 250  Bit Score: 51.84  E-value: 3.18e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDGcPWLVIADFGccLA---DESIGLQLPFsswyvdrgGNGCLMAPEVSTARPg 424
Cdd:cd14103 102 EGVQYMHKQGILHLDLKPENILC-VSRTG-NQIKIIDFG--LArkyDPDKKLKVLF--------GTPEFVAPEVVNYEP- 168
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pravIDYsKADAWAVGAIAYEIFGLVNPFYGQ-----------GKAHLESRSYQEaqlpalpesVPPDVRQLVRALLQRE 493
Cdd:cd14103 169 ----ISY-ATDMWSVGVICYVLLSGLSPFMGDndaetlanvtrAKWDFDDEAFDD---------ISDEAKDFISKLLVKD 234

                ....*..
gi 14165272 494 ASKRPSA 500
Cdd:cd14103 235 PRKRMSA 241
STKc_PSKH1 cd14087
Catalytic domain of the Protein Serine/Threonine kinase H1; STKs catalyze the transfer of the ...
348-503 3.37e-07

Catalytic domain of the Protein Serine/Threonine kinase H1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PSKH1 is an autophosphorylating STK that is expressed ubiquitously and exhibits multiple intracellular localizations including the centrosome, Golgi apparatus, and splice factor compartments. It contains a catalytic kinase domain and an N-terminal SH4-like motif that is acylated to facilitate membrane attachment. PSKH1 plays a rile in the maintenance of the Golgi apparatus, an important organelle within the secretory pathway. It may also function as a novel splice factor and a regulator of prostate cancer cell growth. The PSKH1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270989 [Multi-domain]  Cd Length: 259  Bit Score: 51.77  E-value: 3.37e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDGCPWLVIADFGccLAdesiglqlpfsswYVDRGGNGCLM----------APE 417
Cdd:cd14087 108 DGVKYLHGLGITHRDLKPENLLY-YHPGPDSKIMITDFG--LA-------------STRKKGPNCLMkttcgtpeyiAPE 171
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 418 VSTARPGPRAVidyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLeSRSYQEAQLPALPE---SVPPDVRQLVRALLQREA 494
Cdd:cd14087 172 ILLRKPYTQSV------DMWAVGVIAYILLSGTMPFDDDNRTRL-YRQILRAKYSYSGEpwpSVSNLAKDFIDRLLTVNP 244

                ....*....
gi 14165272 495 SKRPSARVA 503
Cdd:cd14087 245 GERLSATQA 253
STKc_PDIK1L cd13977
Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs ...
325-500 3.40e-07

Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDIK1L is also called STK35 or CLIK-1. It is predominantly a nuclear protein which is capable of autophosphorylation. Through its interaction with the PDZ-LIM protein CLP-36, it is localized to actin stress fibers. The PDIK1L subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270879 [Multi-domain]  Cd Length: 322  Bit Score: 52.56  E-value: 3.40e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 325 LRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVElDPDGCPWLVIADFGCCLADESIGL--QLPFS- 401
Cdd:cd13977 122 MNEYLLSRRPDRQTNTSFMLQLSSALAFLHRNQIVHRDLKPDNILIS-HKRGEPILKVADFGLSKVCSGSGLnpEEPANv 200
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 402 --SWYVDRGGNGCLMAPEVSTARpgpravidYS-KADAWAVGAIAYEIFG------------LVNPFYGQGK-------A 459
Cdd:cd13977 201 nkHFLSSACGSDFYMAPEVWEGH--------YTaKADIFALGIIIWAMVEritfrdgetkkeLLGTYIQQGKeivplgeA 272
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 14165272 460 HLESRSYqEAQLPAL-PESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd13977 273 LLENPKL-ELQIPLKkKKSMNDDMKQLLRDMLAANPQERPDA 313
STKc_SnRK3 cd14663
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
349-497 3.63e-07

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK3 is represented in this cd. The SnRK3 group contains members also known as CBL-interacting protein kinase, salt overly sensitive 2, SOS3-interacting proteins and protein kinase S. These kinases interact with calcium-binding proteins such as SOS3, SCaBPs, and CBL proteins, and are involved in responses to salt stress and in sugar and ABA signaling. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271133 [Multi-domain]  Cd Length: 256  Bit Score: 51.64  E-value: 3.63e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFG-CCLADESIGLQLPFSswyvdRGGNGCLMAPEVsTARPGpra 427
Cdd:cd14663 112 AVDYCHSRGVFHRDLKPENLL--LDEDGN--LKISDFGlSALSEQFRQDGLLHT-----TCGTPNYVAPEV-LARRG--- 178
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 vIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHLeSRSYQEAQLPaLPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14663 179 -YDGAKADIWSCGVILFVLLAGYLPFDDENLMAL-YRKIMKGEFE-YPRWFSPGAKSLIKRILDPNPSTR 245
STKc_nPKC_delta cd05620
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze ...
349-497 3.67e-07

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-delta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173710 [Multi-domain]  Cd Length: 316  Bit Score: 52.25  E-value: 3.67e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTArpgprav 428
Cdd:cd05620 108 GLQFLHSKGIIYRDLKLDNVM--LDRDG--HIKIADFGMC--KENVFGDNRASTFC----GTPDYIAPEILQG------- 170
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 IDYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAqlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05620 171 LKYTfSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT--PHYPRWITKESKDILEKLFERDPTRR 238
STKc_GRK6 cd05630
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs ...
349-501 4.09e-07

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK6 is widely expressed in many tissues and is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270779 [Multi-domain]  Cd Length: 285  Bit Score: 51.95  E-value: 4.09e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEVSTARpgprav 428
Cdd:cd05630 114 GLEDLHRERIVYRDLKPENIL--LDDHG--HIRISDLG-------LAVHVPEGQTIKGRVGTVGYMAPEVVKNE------ 176
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 429 iDYS-KADAWAVGAIAYEIFGLVNPFygQGKAHLESRSYQEAQLPALPES----VPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd05630 177 -RYTfSPDWWALGCLLYEMIAGQSPF--QQRKKKIKREEVERLVKEVPEEysekFSPQARSLCSMLLCKDPAERLGCR 251
STKc_MSK_C cd14092
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
349-497 4.56e-07

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270994 [Multi-domain]  Cd Length: 311  Bit Score: 51.92  E-value: 4.56e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFG-CCLADESIGLQLP-FSSWYVdrggngclmAPEV---STARP 423
Cdd:cd14092 111 AVSFMHSKGVVHRDLKPENLLFTDEDDDAE-IKIVDFGfARLKPENQPLKTPcFTLPYA---------APEVlkqALSTQ 180
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 GpravidYSKA-DAWAVGAIAYEIFglvnpfygQGKAHLESRSYQEaQLPALPE---------------SVPPDVRQLVR 487
Cdd:cd14092 181 G------YDEScDLWSLGVILYTML--------SGQVPFQSPSRNE-SAAEIMKriksgdfsfdgeewkNVSSEAKSLIQ 245
                       170
                ....*....|
gi 14165272 488 ALLQREASKR 497
Cdd:cd14092 246 GLLTVDPSKR 255
STKc_MAP3K12_13 cd14059
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase ...
349-501 5.59e-07

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K12 is also called MAPK upstream kinase (MUK), dual leucine zipper-bearing kinase (DLK) or leucine-zipper protein kinase (ZPK). It is involved in the c-Jun N-terminal kinase (JNK) pathway that directly regulates axonal regulation through the phosphorylation of microtubule-associated protein 1B (MAP1B). It also regulates the differentiation of many cell types including adipocytes and may play a role in adipogenesis. MAP3K13, also called leucine zipper-bearing kinase (LZK), directly phosphorylates and activates MKK7, which in turn activates the JNK pathway. It also activates NF-kB through IKK activation and this activity is enhanced by antioxidant protein-1 (AOP-1). MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAP2Ks (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K12/13 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270961 [Multi-domain]  Cd Length: 237  Bit Score: 50.96  E-value: 5.59e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLADESIGLQLPFSswyvdrgGNGCLMAPEVSTARPGPrav 428
Cdd:cd14059  93 GMNYLHLHKIIHRDLKSPNVLVTYNDV----LKISDFGTSKELSEKSTKMSFA-------GTVAWMAPEVIRNEPCS--- 158
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 idySKADAWAVGAIAYEIFGLVNPF---------YGQGKAHLesrsyqeaQLPaLPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14059 159 ---EKVDIWSFGVVLWELLTGEIPYkdvdssaiiWGVGSNSL--------QLP-VPSTCPDGFKLLMKQCWNSKPRNRPS 226

                ..
gi 14165272 500 AR 501
Cdd:cd14059 227 FR 228
STKc_STK36 cd14002
Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the ...
358-497 5.72e-07

Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK36, also called Fused (or Fu) kinase, is involved in the Hedgehog signaling pathway. It is activated by the Smoothened (SMO) signal transducer, resulting in the stabilization of GLI transcription factors and the phosphorylation of SUFU to facilitate the nuclear accumulation of GLI. In Drosophila, Fused kinase is maternally required for proper segmentation during embryonic development and for the development of legs and wings during the larval stage. In mice, STK36 is not necessary for embryonic development, although mice deficient in STK36 display growth retardation postnatally. The STK36 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270904 [Multi-domain]  Cd Length: 253  Bit Score: 51.10  E-value: 5.72e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNILveLDPDGCpwLVIADFGCCLAdESIGLQLPFSSwyvdrGGNGCLMAPEVSTARPgpravIDYsKADAW 437
Cdd:cd14002 120 IIHRDMKPQNIL--IGKGGV--VKLCDFGFARA-MSCNTLVLTSI-----KGTPLYMAPELVQEQP-----YDH-TADLW 183
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 438 AVGAIAYEIFGLVNPFYGQGKAHLESRSYQEaqlP-ALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14002 184 SLGCILYELFVGQPPFYTNSIYQLVQMIVKD---PvKWPSNMSPEFKSFLQGLLNKDPSKR 241
STKc_GSK3 cd14137
The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze ...
271-386 7.46e-07

The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GSK3 is a mutifunctional kinase involved in many cellular processes including cell division, proliferation, differentiation, adhesion, and apoptosis. In plants, GSK3 plays a role in the response to osmotic stress. In Caenorhabditis elegans, it plays a role in regulating normal oocyte-to-embryo transition and response to oxidative stress. In Chlamydomonas reinhardtii, GSK3 regulates flagellar length and assembly. In mammals, there are two isoforms, GSK3alpha and GSK3beta, which show both distinct and redundant functions. The two isoforms differ mainly in their N-termini. They are both involved in axon formation and in Wnt signaling.They play distinct roles in cardiogenesis, with GSKalpha being essential in cardiomyocyte survival, and GSKbeta regulating heart positioning and left-right symmetry. GSK3beta was first identified as a regulator of glycogen synthesis, but has since been determined to play other roles. It regulates the degradation of beta-catenin and IkB. Beta-catenin is the main effector of Wnt, which is involved in normal haematopoiesis and stem cell function. IkB is a central inhibitor of NF-kB, which is critical in maintaining leukemic cell growth. GSK3beta is enriched in the brain and is involved in regulating neuronal signaling pathways. It is implicated in the pathogenesis of many diseases including Type II diabetes, obesity, mood disorders, Alzheimer's disease, osteoporosis, and some types of cancer, among others. The GSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271039 [Multi-domain]  Cd Length: 293  Bit Score: 50.96  E-value: 7.46e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTSSvpllpgalvdypdvlpsrlhpEGLGHGRTLFLVMKNYPCTL----RQYLCVNTPSP---------- 336
Cdd:cd14137  56 HPNIVKLKYFFYSS---------------------GEKKDEVYLNLVMEYMPETLyrviRHYSKNKQTIPiiyvklysyq 114
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 14165272 337 --RlaammllqlleGVDHLVQQGIAHRDLKSDNILVelDPDGCPwLVIADFG 386
Cdd:cd14137 115 lfR-----------GLAYLHSLGICHRDIKPQNLLV--DPETGV-LKLCDFG 152
PTKc_Csk_like cd05039
Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
250-507 9.38e-07

Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of Csk, Chk, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. The Csk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270635 [Multi-domain]  Cd Length: 256  Bit Score: 50.43  E-value: 9.38e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 250 AGEYGAV---TYRKSKRGPKQLA-------------------PHPNIIRVLRAFTSSVPLL-------PGALVDYpdvLP 300
Cdd:cd05039  16 KGEFGDVmlgDYRGQKVAVKCLKddstaaqaflaeasvmttlRHPNLVQLLGVVLEGNGLYivteymaKGSLVDY---LR 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 301 SRlhpeglghGRTLFlvmknypcTLRQYL--CVNTpsprlaammllqlLEGVDHLVQQGIAHRDLKSDNILVelDPDGCP 378
Cdd:cd05039  93 SR--------GRAVI--------TRKDQLgfALDV-------------CEGMEYLESKKFVHRDLAARNVLV--SEDNVA 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 379 wlVIADFGccLA-DESIGLQ---LPFSsWyvdrggngclMAPEVStarpgpRAVIDYSKADAWAVGAIAYEI--FGLVnP 452
Cdd:cd05039 142 --KVSDFG--LAkEASSNQDggkLPIK-W----------TAPEAL------REKKFSTKSDVWSFGILLWEIysFGRV-P 199
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 453 FYGQGKA----HLESRSYQEAqlpalPESVPPDVRQLVRALLQREASKRPSARVAANVL 507
Cdd:cd05039 200 YPRIPLKdvvpHVEKGYRMEA-----PEGCPPEVYKVMKNCWELDPAKRPTFKQLREKL 253
STKc_Nek5 cd08225
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
349-499 1.01e-06

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Nek5 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173765 [Multi-domain]  Cd Length: 257  Bit Score: 50.34  E-value: 1.01e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpwlVIADFGcclaDESIGLQLPFSSWYVDR-GGNGCLMAPEVSTARPgpra 427
Cdd:cd08225 113 GLKHIHDRKILHRDIKSQNIF--LSKNG----MVAKLG----DFGIARQLNDSMELAYTcVGTPYYLSPEICQNRP---- 178
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 428 vidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPeSVPPDVRQLVRALLQREASKRPS 499
Cdd:cd08225 179 ---YNnKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISP-NFSRDLRSLISQLFKVSPRDRPS 247
STKc_Vps15 cd13980
Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein ...
349-501 1.04e-06

Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein 15; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Vps15 is a large protein consisting of an N-terminal kinase domain, a C-terminal WD-repeat containing domain, and an intermediate bridge domain that contain HEAT repeats. The kinase domain is necessary for the signaling functions of Vps15. Human Vps15 was previously called p150. It associates and regulates Vps34, also called Class III phosphoinositide 3-kinase (PI3K), which catalyzes the phosphorylation of D-myo-phosphatidylinositol (PtdIns). Vps34 is the only PI3K present in yeast. It plays an important role in the regulation of protein and vesicular trafficking and sorting, autophagy, trimeric G-protein signaling, and phagocytosis. The Vps15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270882 [Multi-domain]  Cd Length: 278  Bit Score: 50.71  E-value: 1.04e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVeldpDGCPWLVIADFGCcladeSIGLQLP------FSSWYVDRGGNGCLMAPE----- 417
Cdd:cd13980 109 ALNQCHKRGVCHGDIKTENVLV----TSWNWVYLTDFAS-----FKPTYLPednpadFSYFFDTSRRRTCYIAPErfvda 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 418 -VSTARPGPRAVIDYSKADAWAVGAIAYEIFGLVNP-F-------YGQGKahlesrsYQEAQlpALPESVPPDVRQLVRA 488
Cdd:cd13980 180 lTLDAESERRDGELTPAMDIFSLGCVIAELFTEGRPlFdlsqllaYRKGE-------FSPEQ--VLEKIEDPNIRELILH 250
                       170
                ....*....|...
gi 14165272 489 LLQREASKRPSAR 501
Cdd:cd13980 251 MIQRDPSKRLSAE 263
STKc_MAP4K3_like cd06613
Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like ...
349-500 1.17e-06

Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270788 [Multi-domain]  Cd Length: 259  Bit Score: 50.38  E-value: 1.17e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCPWLviADFG-CCLADESIGLQLPFSswyvdrgGNGCLMAPEV-STARPGPr 426
Cdd:cd06613 109 GLAYLHSTGKIHRDIKGANIL--LTEDGDVKL--ADFGvSAQLTATIAKRKSFI-------GTPYWMAPEVaAVERKGG- 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 427 avidY-SKADAWAVGAIAYEIFGLVNPFYGqgkAH----LESRSYQEAQLPAL--PESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd06613 177 ----YdGKCDIWALGITAIELAELQPPMFD---LHpmraLFLIPKSNFDPPKLkdKEKWSPDFHDFIKKCLTKNPKKRPT 249

                .
gi 14165272 500 A 500
Cdd:cd06613 250 A 250
STKc_GRK1 cd05608
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs ...
349-497 1.22e-06

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK1 (also called rhodopsin kinase) belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270759 [Multi-domain]  Cd Length: 288  Bit Score: 50.27  E-value: 1.22e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccLADESIGLQLPFSSWyvdrGGNGCLMAPEVSTARPgprav 428
Cdd:cd05608 117 GLEHLHQRRIIYRDLKPENVL--LDDDGN--VRISDLG--LAVELKDGQTKTKGY----AGTPGFMAPELLLGEE----- 181
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 429 IDYSkADAWAVGAIAYEIFGLVNPFYGQG----KAHLESRSYQEAQlpALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05608 182 YDYS-VDYFTLGVTLYEMIAARGPFRARGekveNKELKQRILNDSV--TYSEKFSPASKSICEALLAKDPEKR 251
STKc_STK10 cd06644
Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase ...
348-500 1.37e-06

Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase or LOK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK10/LOK is also called polo-like kinase kinase 1 in Xenopus (xPlkk1). It is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132975 [Multi-domain]  Cd Length: 292  Bit Score: 50.42  E-value: 1.37e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCClADESIGLQLPFSswYVdrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd06644 121 EALQYLHSMKIIHRDLKAGNVLLTLDGD----IKLADFGVS-AKNVKTLQRRDS--FI---GTPYWMAPEVVMCETMKDT 190
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 428 VIDYsKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRsYQEAQLPAL--PESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06644 191 PYDY-KADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSEPPTLsqPSKWSMEFRDFLKTALDKHPETRPSA 263
STKc_cPKC_alpha cd05615
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs ...
349-497 1.62e-06

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. The cPKC-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270766 [Multi-domain]  Cd Length: 341  Bit Score: 50.38  E-value: 1.62e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGLQLPfsswyvDRGGNGCLMAPEVSTARPGPRAV 428
Cdd:cd05615 123 GLFFLHKKGIIYRDLKLDNVM--LDSEG--HIKIADFGMCKEHMVEGVTTR------TFCGTPDYIAPEIIAYQPYGRSV 192
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 429 idyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLeSRSYQEAQLpALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05615 193 ------DWWAYGVLLYEMLAGQPPFDGEDEDEL-FQSIMEHNV-SYPKSLSKEAVSICKGLMTKHPAKR 253
STKc_PAK6 cd06659
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the ...
352-501 1.68e-06

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. PAK6 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270821 [Multi-domain]  Cd Length: 297  Bit Score: 49.98  E-value: 1.68e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 352 HLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladESIGLQLPFSSWYVdrgGNGCLMAPEVSTARPGPRAVidy 431
Cdd:cd06659 132 YLHSQGVIHRDIKSDSILLTLDGR----VKLSDFGFC---AQISKDVPKRKSLV---GTPYWMAPEVISRCPYGTEV--- 198
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 432 skaDAWAVGAIAYEIFGLVNPFYGQGKAHLESRsYQEAQLPALPES--VPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd06659 199 ---DIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNShkASPVLRDFLERMLVRDPQERATAQ 266
STKc_PLK cd14099
Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the ...
348-500 1.87e-06

Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. PLKs derive their names from homology to polo, a kinase first identified in Drosophila. There are five mammalian PLKs (PLK1-5) from distinct genes. There is good evidence that PLK1 may function as an oncogene while PLK2-5 have tumor suppressive properties. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. PLK2 functions in G1 progression, S-phase arrest, and centriole duplication. PLK3 regulates angiogenesis and responses to DNA damage. PLK4 is required for late mitotic progression, cell survival, and embryonic development. PLK5 was first identified as a pseudogene containing a stop codon within the kinase domain, however, both murine and human genes encode expressed proteins. PLK5 functions in cell cycle arrest.


Pssm-ID: 271001 [Multi-domain]  Cd Length: 258  Bit Score: 49.47  E-value: 1.87e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccLADEsigLQLPFsswyvDRGGNGC----LMAPEVSTARP 423
Cdd:cd14099 112 SGVKYLHSNRIIHRDLKLGNLF--LDENMN--VKIGDFG--LAAR---LEYDG-----ERKKTLCgtpnYIAPEVLEKKK 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 GpravidYS-KADAWAVGAIAYE-IFGlVNPFygQGK------AHLESRSYQeaqlpaLPES--VPPDVRQLVRALLQRE 493
Cdd:cd14099 178 G------HSfEVDIWSLGVILYTlLVG-KPPF--ETSdvketyKRIKKNEYS------FPSHlsISDEAKDLIRSMLQPD 242

                ....*..
gi 14165272 494 ASKRPSA 500
Cdd:cd14099 243 PTKRPSL 249
STKc_PRKX_like cd05612
Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of ...
350-497 1.91e-06

Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PRKX-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270763 [Multi-domain]  Cd Length: 292  Bit Score: 49.74  E-value: 1.91e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccladesiglqlpFSSWYVDRGGNGC----LMAPEVSTARPGP 425
Cdd:cd05612 114 LEYLHSKEIVYRDLKPENIL--LDKEG--HIKLTDFG-------------FAKKLRDRTWTLCgtpeYLAPEVIQSKGHN 176
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 426 RAVidyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLesrsYQEAQLPAL--PESVPPDVRQLVRALLQREASKR 497
Cdd:cd05612 177 KAV------DWWALGILIYEMLVGYPPFFDDNPFGI----YEKILAGKLefPRHLDLYAKDLIKKLLVVDRTRR 240
PKc_MAPKK_plant_like cd06623
Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and ...
358-500 1.96e-06

Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and similar proteins; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis; MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling; MKK2 is involved in cold and salt stress signaling; MKK4/MKK5 participates in innate immunity; and MKK7 regulates basal and systemic acquired resistance. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132954 [Multi-domain]  Cd Length: 264  Bit Score: 49.51  E-value: 1.96e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNILVELdpDGCPwlVIADFGCCLADESIglQLPFSSW-----YvdrggngclMAPEvstaRPGPRAvidYS 432
Cdd:cd06623 121 IIHRDIKPSNLLINS--KGEV--KIADFGISKVLENT--LDQCNTFvgtvtY---------MSPE----RIQGES---YS 178
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 433 -KADAWAVGAIAYEIFGLVNPFygqgkAHLESRSY--------QEAQLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06623 179 yAADIWSLGLTLLECALGKFPF-----LPPGQPSFfelmqaicDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSA 250
STKc_DAPK2 cd14196
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 2; STKs ...
348-505 1.96e-06

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK2, also called DAPK-related protein 1 (DRP-1), is a Ca2+/calmodulin (CaM)-regulated protein containing an N-terminal kinase domain, a CaM autoinhibitory site and a dimerization module. It lacks the cytoskeletal binding regions of DAPK1 and the exogenous protein has been shown to be soluble and cytoplasmic. FLAG-tagged DAPK2, however, accumulated within membrane-enclosed autophagic vesicles. It is unclear where endogenous DAPK2 is localized. DAPK2 participates in TNF-alpha and FAS-receptor induced cell death and enhances neutrophilic maturation in myeloid leukemic cells. It contributes to the induction of anoikis and its down-regulation is implicated in the beta-catenin induced resistance of malignant epithelial cells to anoikis. The DAPK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271098 [Multi-domain]  Cd Length: 269  Bit Score: 49.57  E-value: 1.96e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDG-CPWLVIADFGccLADEsIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPR 426
Cdd:cd14196 119 DGVNYLHTKKIAHFDLKPENIML-LDKNIpIPHIKLIDFG--LAHE-IEDGVEFKNIF----GTPEFVAPEIVNYEPLGL 190
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 427 AvidyskADAWAVGAIAYEIFGLVNPFYGQGK----AHLESRSYQ-EAQLPALPESVPPDvrqLVRALLQREASKRPSAR 501
Cdd:cd14196 191 E------ADMWSIGVITYILLSGASPFLGDTKqetlANITAVSYDfDEEFFSHTSELAKD---FIRKLLVKETRKRLTIQ 261

                ....
gi 14165272 502 VAAN 505
Cdd:cd14196 262 EALR 265
STKc_ULK2 cd14201
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the ...
353-497 2.06e-06

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK2 is ubiquitously expressed and is essential in autophagy induction. It displays partially redundant functions with ULK1 and is able to compensate for the loss of ULK1 in non-selective autophagy. It also displays neuron-specific functions and is important in axon development. The ULK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271103 [Multi-domain]  Cd Length: 271  Bit Score: 49.62  E-value: 2.06e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 353 LVQQGIAHRDLKSDNILVEL------DPDGCPwLVIADFGCC--LADESIGLQLPFSSWYvdrggngclMAPEVSTARpg 424
Cdd:cd14201 121 LHSKGIIHRDLKPQNILLSYasrkksSVSGIR-IKIADFGFAryLQSNMMAATLCGSPMY---------MAPEVIMSQ-- 188
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 425 praviDY-SKADAWAVGAIAYEIFGLVNPFygQGKAHLESRSYQEAQ---LPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14201 189 -----HYdAKADLWSIGTVIYQCLVGKPPF--QANSPQDLRMFYEKNknlQPSIPRETSPYLADLLLGLLQRNQKDR 258
STKc_SGK3 cd05604
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
358-505 2.06e-06

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK3 (also called cytokine-independent survival kinase or CISK) is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. The SGK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270755 [Multi-domain]  Cd Length: 326  Bit Score: 49.96  E-value: 2.06e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLqlpfSSWYVDRGGNGCLMAPEVSTARPGPRAVidyskaDAW 437
Cdd:cd05604 118 IVYRDLKPENIL--LDSQG--HIVLTDFGLC--KEGISN----SDTTTTFCGTPEYLAPEVIRKQPYDNTV------DWW 181
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 438 AVGAIAYEIFGLVNPFYGQGKAHLESRSYQEaqlpalPESVPPDVRQLVRALLQREASKRPSARVAAN 505
Cdd:cd05604 182 CLGSVLYEMLYGLPPFYCRDTAEMYENILHK------PLVLRPGISLTAWSILEELLEKDRQLRLGAK 243
PTZ00267 PTZ00267
NIMA-related protein kinase; Provisional
350-511 2.33e-06

NIMA-related protein kinase; Provisional


Pssm-ID: 140293 [Multi-domain]  Cd Length: 478  Bit Score: 50.40  E-value: 2.33e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  350 VDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccladesiglqlpFSSWYVDR-----GGNGC----LMAPEVST 420
Cdd:PTZ00267 182 LDEVHSRKMMHRDLKSANIF--LMPTGI--IKLGDFG-------------FSKQYSDSvsldvASSFCgtpyYLAPELWE 244
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  421 ARpgpraviDYSK-ADAWAVGAIAYEIFGLVNPFYGQGKahlesRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:PTZ00267 245 RK-------RYSKkADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPA 312
                        170
                 ....*....|...
gi 14165272  500 AR-VAANVLHLSL 511
Cdd:PTZ00267 313 LRpTTQQLLHTEF 325
STKc_TGFbR1_ACVR1b_ACVR1c cd14143
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I ...
357-446 2.44e-06

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I Receptor and Activin Type IB/IC Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR1, also called Activin receptor-Like Kinase 5 (ALK5), functions as a receptor for TGFbeta and phoshorylates SMAD2/3. TGFbeta proteins are cytokines that regulate cell growth, differentiation, and survival, and are critical in the development and progression of many human cancers. Mutations in TGFbR1 (and TGFbR2) can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. ACVR1b (also called ALK4) and ACVR1c (also called ALK7) act as receptors for activin A and B, respectively. TGFbR1, ACVR1b, and ACVR1c belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like TGFbR1, ACVR1b, and ACVR1c, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The TGFbR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271045 [Multi-domain]  Cd Length: 288  Bit Score: 49.36  E-value: 2.44e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVELDPDGCpwlvIADFGCCLADESI--GLQLPfsswYVDRGGNGCLMAPEVSTARPGPRAVIDYSKA 434
Cdd:cd14143 120 AIAHRDLKSKNILVKKNGTCC----IADLGLAVRHDSAtdTIDIA----PNHRVGTKRYMAPEVLDDTINMKHFESFKRA 191
                        90
                ....*....|..
gi 14165272 435 DAWAVGAIAYEI 446
Cdd:cd14143 192 DIYALGLVFWEI 203
STKc_ASK cd06624
Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs ...
348-500 2.52e-06

Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs) and include ASK1, ASK2, and MAPKKK15. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270794 [Multi-domain]  Cd Length: 268  Bit Score: 49.33  E-value: 2.52e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPwlvIADFGCC--LAdesiGLQlPFSSWYVdrgGNGCLMAPEVSTArpGP 425
Cdd:cd06624 119 EGLKYLHDNKIVHRDIKGDNVLVNTYSGVVK---ISDFGTSkrLA----GIN-PCTETFT---GTLQYMAPEVIDK--GQ 185
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 426 RAvidYSK-ADAWAVGAIAYEIFGLVNPFYGQGKAH---LESRSYQEAqlPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06624 186 RG---YGPpADIWSLGCTIIEMATGKPPFIELGEPQaamFKVGMFKIH--PEIPESLSEEAKSFILRCFEPDPDKRATA 259
STKc_GRK4_like cd05605
Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs ...
349-497 2.52e-06

Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. They contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270756 [Multi-domain]  Cd Length: 285  Bit Score: 49.28  E-value: 2.52e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccLAdesigLQLPFSSWYVDRGGNGCLMAPEvstarpgpraV 428
Cdd:cd05605 114 GLEHLHSERIVYRDLKPENIL--LDDHG--HVRISDLG--LA-----VEIPEGETIRGRVGTVGYMAPE----------V 172
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 IDYSK----ADAWAVGAIAYEIFGLVNPFygqgKAHLES-------RSYQEAQLPaLPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05605 173 VKNERytfsPDWWGLGCLIYEMIEGQAPF----RARKEKvkreevdRRVKEDQEE-YSEKFSEEAKSICSQLLQKDPKTR 247
STKc_MEKK2 cd06652
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
348-500 2.54e-06

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK2 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270818 [Multi-domain]  Cd Length: 264  Bit Score: 49.27  E-value: 2.54e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveldPDGCPWLVIADFGCCLADESIGLQlpfSSWYVDRGGNGCLMAPEVSTARPGPRa 427
Cdd:cd06652 117 EGVHYLHSNMIVHRDIKGANIL----RDSVGNVKLGDFGASKRLQTICLS---GTGMKSVTGTPYWMSPEVISGEGYGR- 188
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 428 vidysKADAWAVGAIAYEIFGLVNPFygqgkAHLESRS--YQEAQLPALPEsVPPDVRQLVRALLQR---EASKRPSA 500
Cdd:cd06652 189 -----KADIWSVGCTVVEMLTEKPPW-----AEFEAMAaiFKIATQPTNPQ-LPAHVSDHCRDFLKRifvEAKLRPSA 255
STKc_MEKK1 cd06630
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
349-501 2.77e-06

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK1 is a MAPK kinase kinase (MAPKKK or MKKK) that phosphorylates and activates activates the ERK1/2 and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270800 [Multi-domain]  Cd Length: 268  Bit Score: 48.96  E-value: 2.77e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVelDPDGcPWLVIADFGCC--------LADESIGLQLpfsswyvdrgGNGCLMAPEVST 420
Cdd:cd06630 115 GLAYLHDNQIIHRDLKGANLLV--DSTG-QRLRIADFGAAarlaskgtGAGEFQGQLL----------GTIAFMAPEVLR 181
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 421 ARPGPRAvidyskADAWAVGAIAYEIFGLVNPFygqgKAHLESRSYQ-------EAQLPALPESVPPDVRQLVRALLQRE 493
Cdd:cd06630 182 GEQYGRS------CDVWSVGCVIIEMATAKPPW----NAEKISNHLAlifkiasATTPPPIPEHLSPGLRDVTLRCLELQ 251

                ....*...
gi 14165272 494 ASKRPSAR 501
Cdd:cd06630 252 PEDRPPAR 259
PTKc_Srm_Brk cd05148
Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal ...
348-508 2.79e-06

Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and Breast tumor kinase (Brk); PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk (also called protein tyrosine kinase 6) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Brk has been found to be overexpressed in a majority of breast tumors. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. The Srm/Brk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133248 [Multi-domain]  Cd Length: 261  Bit Score: 48.97  E-value: 2.79e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVElDPDGCPwlvIADFGCC-LADESIGL----QLPFsSWyvdrggngclMAPEVSTAR 422
Cdd:cd05148 115 EGMAYLEEQNSIHRDLAARNILVG-EDLVCK---VADFGLArLIKEDVYLssdkKIPY-KW----------TAPEAASHG 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 pgpraviDYS-KADAWAVGAIAYEIFglvnpfyGQGKAHLESRSYQEA--------QLPAlPESVPPDVRQLVRALLQRE 493
Cdd:cd05148 180 -------TFStKSDVWSFGILLYEMF-------TYGQVPYPGMNNHEVydqitagyRMPC-PAKCPQEIYKIMLECWAAE 244
                       170
                ....*....|....*
gi 14165272 494 ASKRPSARVAANVLH 508
Cdd:cd05148 245 PEDRPSFKALREELD 259
STKc_HUNK cd14070
Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase ...
350-503 2.95e-06

Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase (also called MAK-V); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HUNK/MAK-V was identified from a mammary tumor in an MMTV-neu transgenic mouse. It is required for the metastasis of c-myc-induced mammary tumors, but is not necessary for c-myc-induced primary tumor formation or normal development. It is required for HER2/neu-induced tumor formation and maintenance of the cells' tumorigenic phenotype. It is over-expressed in aggressive subsets of ovary, colon, and breast carcinomas. HUNK interacts with synaptopodin, and may also play a role in synaptic plasticity. The HUNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270972 [Multi-domain]  Cd Length: 262  Bit Score: 49.05  E-value: 2.95e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLADESIGLQLPFSSwyvdRGGNGCLMAPE-VSTARPGPrav 428
Cdd:cd14070 116 VEHLHRAGVVHRDLKIENLLLDENDN----IKLIDFGLSNCAGILGYSDPFST----QCGSPAYAAPElLARKKYGP--- 184
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 429 idysKADAWAVGAIAYEIFGLVNPF----YGQGKAHlesRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPSARVA 503
Cdd:cd14070 185 ----KVDVWSIGVNMYAMLTGTLPFtvepFSLRALH---QKMVDKEMNPLPTDLSPGAISFLRSLLEPDPLKRPNIKQA 256
STKc_Mnk1 cd14174
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase ...
350-500 3.08e-06

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271076 [Multi-domain]  Cd Length: 289  Bit Score: 49.26  E-value: 3.08e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELdPDGCPWLVIADFgcclaDESIGLQL-----PFSSWYVDRG-GNGCLMAPEVSTARP 423
Cdd:cd14174 113 LDFLHTKGIAHRDLKPENILCES-PDKVSPVKICDF-----DLGSGVKLnsactPITTPELTTPcGSAEYMAPEVVEVFT 186
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 GPRAVIDySKADAWAVGAIAYEIFGLVNPFYGQGKAHL------ESRSYQEAQLPALPES-----------VPPDVRQLV 486
Cdd:cd14174 187 DEATFYD-KRCDLWSLGVILYIMLSGYPPFVGHCGTDCgwdrgeVCRVCQNKLFESIQEGkyefpdkdwshISSEAKDLI 265
                       170
                ....*....|....
gi 14165272 487 RALLQREASKRPSA 500
Cdd:cd14174 266 SKLLVRDAKERLSA 279
STKc_ULK4 cd14010
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the ...
349-497 3.23e-06

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ULK4 is a functionally uncharacterized kinase that shows similarity to ATG1/ULKs. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. The ULK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270912 [Multi-domain]  Cd Length: 269  Bit Score: 48.83  E-value: 3.23e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVeldpDGCPWLVIADFG--CCLADESIGLQLPFSSWYVDRG--------GNGCLMAPEV 418
Cdd:cd14010 106 GLHYIHSKGIIYCDLKPSNILL----DGNGTLKLSDFGlaRREGEILKELFGQFSDEGNVNKvskkqakrGTPYYMAPEL 181
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 419 STARPgpravidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLeSRSYQEAQLPALPESV----PPDVRQLVRALLQRE 493
Cdd:cd14010 182 FQGGV-------HSFAsDLWALGCVLYEMFTGKPPFVAESFTEL-VEKILNEDPPPPPPKVsskpSPDFKSLLKGLLEKD 253

                ....
gi 14165272 494 ASKR 497
Cdd:cd14010 254 PAKR 257
STKc_PAK_I cd06647
Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze ...
348-501 3.44e-06

Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270814 [Multi-domain]  Cd Length: 261  Bit Score: 48.77  E-value: 3.44e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladesigLQL-PFSSWYVDRGGNGCLMAPEVSTARP-GP 425
Cdd:cd06647 114 QALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFC-------AQItPEQSKRSTMVGTPYWMAPEVVTRKAyGP 182
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 426 ravidysKADAWAVGAIAYEIFGLVNPFYGQG--KAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd06647 183 -------KVDIWSLGIMAIEMVEGEPPYLNENplRALYLIATNGTPELQN-PEKLSAIFRDFLNRCLEMDVEKRGSAK 252
STKc_RIP1 cd14027
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze ...
348-499 3.72e-06

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP1 harbors a C-terminal Death domain (DD), which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 can also recruit other kinases including MEKK1, MEKK3, and RIP3 through an intermediate domain (ID) that bears a RIP homotypic interaction motif (RHIM). RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accummulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. RIP kinases serve as essential sensors of cellular stress. The RIP1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270929 [Multi-domain]  Cd Length: 267  Bit Score: 48.65  E-value: 3.72e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCC-------LADESIGLQLPFSSWYVDRGGNGCLMAPE--- 417
Cdd:cd14027 101 EGMAYLHGKGVIHKDLKPENILVDNDFH----IKIADLGLAsfkmwskLTKEEHNEQREVDGTAKKNAGTLYYMAPEhln 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 418 VSTARPGpravidySKADAWAVGAIAYEIFGLVNPF---YGQGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREA 494
Cdd:cd14027 177 DVNAKPT-------EKSDVYSFAIVLWAIFANKEPYenaINEDQIIMCIKSGNRPDVDDITEYCPREIIDLMKLCWEANP 249

                ....*
gi 14165272 495 SKRPS 499
Cdd:cd14027 250 EARPT 254
STKc_CAMKK cd14118
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; ...
349-497 3.78e-06

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271020 [Multi-domain]  Cd Length: 275  Bit Score: 48.90  E-value: 3.78e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSwyvdRGGNGCLMAPE-VSTARP--GP 425
Cdd:cd14118 127 GIEYLHYQKIIHRDIKPSNLL--LGDDG--HVKIADFGVS--NEFEGDDALLSS----TAGTPAFMAPEaLSESRKkfSG 196
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 426 RAvidyskADAWAVGAIAYE-IFGLVnPFYGQGKAHLESR-SYQEAQLPALPeSVPPDVRQLVRALLQREASKR 497
Cdd:cd14118 197 KA------LDIWAMGVTLYCfVFGRC-PFEDDHILGLHEKiKTDPVVFPDDP-VVSEQLKDLILRMLDKNPSER 262
STKc_MST3_like cd06609
Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs ...
348-501 3.88e-06

Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270786 [Multi-domain]  Cd Length: 274  Bit Score: 48.78  E-value: 3.88e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCC--LADESIGLQ----LPFssWyvdrggngclMAPEVSTa 421
Cdd:cd06609 109 LGLEYLHSEGKIHRDIKAANILLSEEGD----VKLADFGVSgqLTSTMSKRNtfvgTPF--W----------MAPEVIK- 171
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 422 rpgpRAVIDYsKADAWAVGAIAYEIFglvnpfygQGKAHLESRSYQEAqLPALPESVPP---------DVRQLVRALLQR 492
Cdd:cd06609 172 ----QSGYDE-KADIWSLGITAIELA--------KGEPPLSDLHPMRV-LFLIPKNNPPslegnkfskPFKDFVELCLNK 237

                ....*....
gi 14165272 493 EASKRPSAR 501
Cdd:cd06609 238 DPKERPSAK 246
PKc_TNNI3K cd14064
Catalytic domain of the Dual-specificity protein kinase, TNNI3-interacting kinase; ...
352-499 3.98e-06

Catalytic domain of the Dual-specificity protein kinase, TNNI3-interacting kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TNNI3K, also called cardiac ankyrin repeat kinase (CARK), is a cardiac-specific troponin I-interacting kinase that promotes cardiac myogenesis, improves cardiac performance, and protects the myocardium from ischemic injury. It contains N-terminal ankyrin repeats, a catalytic kinase domain, and a C-terminal serine-rich domain. TNNI3K exerts a disease-accelerating effect on cardiac dysfunction and reduced survival in mouse models of cardiomyopathy. The TNNI3K subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270966 [Multi-domain]  Cd Length: 254  Bit Score: 48.68  E-value: 3.98e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 352 HLVQQGIAHRDLKSDNILveLDPDGCPwlVIADFG-----CCLADESIGLQlPfsswyvdrgGNGCLMAPEVSTarpgpr 426
Cdd:cd14064 110 HNLTQPIIHRDLNSHNIL--LYEDGHA--VVADFGesrflQSLDEDNMTKQ-P---------GNLRWMAPEVFT------ 169
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 427 AVIDYS-KADAWAVGAIAYEIFGLVNPFygqgkAHLE------SRSYQEAQlPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14064 170 QCTRYSiKADVFSYALCLWELLTGEIPF-----AHLKpaaaaaDMAYHHIR-PPIGYSIPKPISSLLMRGWNAEPESRPS 243
PK_KSR cd14063
Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to ...
348-499 4.65e-06

Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. KSR is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. KSR proteins regulate the assembly and activation of the Raf/MEK/ERK module upon Ras activation at the membrane by direct association of its components. They are widely regarded as pseudokinases, but there is some debate in this designation as a few groups have reported detecting kinase catalytic activity for KSRs, specifically KSR1. Vertebrates contain two KSR proteins, KSR1 and KSR2. The KSR subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270965 [Multi-domain]  Cd Length: 271  Bit Score: 48.50  E-value: 4.65e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLVIADFGCcladesiglqlpFSSWYVDRGG--NGCLM---------AP 416
Cdd:cd14063 108 QGMGYLHAKGIIHKDLKSKNIFLENGR-----VVITDFGL------------FSLSGLLQPGrrEDTLVipngwlcylAP 170
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 417 EVSTA-RPGPRAVID--YSKA-DAWAVGAIAYEIFGLVNPFYGQgkaHLESRSYQ--EAQLPALPE-SVPPDVRQLVRAL 489
Cdd:cd14063 171 EIIRAlSPDLDFEESlpFTKAsDVYAFGTVWYELLAGRWPFKEQ---PAESIIWQvgCGKKQSLSQlDIGREVKDILMQC 247
                       170
                ....*....|
gi 14165272 490 LQREASKRPS 499
Cdd:cd14063 248 WAYDPEKRPT 257
PTKc_Chk cd05083
Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the ...
348-501 4.79e-06

Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). Chk inhibits Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Like Csk, it is a cytoplasmic (or nonreceptor) tyr kinase containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases that are anchored to the plasma membrane, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. The Chk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270666 [Multi-domain]  Cd Length: 254  Bit Score: 48.33  E-value: 4.79e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGcpwlVIADFGccLADesiglqlpfsswyVDRGGNGCLMAPEVSTArpgPRA 427
Cdd:cd05083 111 EGMEYLESKKLVHRDLAARNILVSEDGVA----KISDFG--LAK-------------VGSMGVDNSRLPVKWTA---PEA 168
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 428 VIDY---SKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd05083 169 LKNKkfsSKSDVWSYGVLLWEVFSYGRAPYPKMSVKEVKEAVEKGYRMEPPEGCPPDVYSIMTSCWEAEPGKRPSFK 245
STKc_RSK3_C cd14178
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 3 (also called ...
350-453 5.07e-06

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 3 (also called Ribosomal protein S6 kinase alpha-2 or 90kDa ribosomal protein S6 kinase 2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK3 is also called S6K-alpha-2, RPS6KA2, p90RSK2 or MAPK-activated protein kinase 1c (MAPKAPK-1c). RSK3 binds muscle A-kinase anchoring protein (mAKAP)-b directly and regulates concentric cardiac myocyte growth. The RSK3 gene, RPS6KA2, is a putative tumor suppressor gene in sporadic epithelial ovarian cancer and variations to the gene may be associated with rectal cancer risk. RSK3 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271080 [Multi-domain]  Cd Length: 293  Bit Score: 48.47  E-value: 5.07e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVeLDPDGCPWLV-IADFGccladesIGLQLpfsswyvdRGGNGCLMAPEVSTARPGPRAV 428
Cdd:cd14178 110 VEYLHSQGVVHRDLKPSNILY-MDESGNPESIrICDFG-------FAKQL--------RAENGLLMTPCYTANFVAPEVL 173
                        90       100
                ....*....|....*....|....*...
gi 14165272 429 I--DYSKA-DAWAVGAIAYEIFGLVNPF 453
Cdd:cd14178 174 KrqGYDAAcDIWSLGILLYTMLAGFTPF 201
STKc_MST1_2 cd06612
Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; ...
348-500 5.17e-06

Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 and MEKK1 by acting as a MAPK kinase kinase kinase. Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132943 [Multi-domain]  Cd Length: 256  Bit Score: 48.03  E-value: 5.17e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCPWLviADFGccladesIGLQLpfSSWYVDRG---GNGCLMAPEVSTArpg 424
Cdd:cd06612 110 KGLEYLHSNKKIHRDIKAGNIL--LNEEGQAKL--ADFG-------VSGQL--TDTMAKRNtviGTPFWMAPEVIQE--- 173
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pravIDY-SKADAWAVGAIAYEIFGLVNPFygqgkAHLESRS----YQEAQLPAL--PESVPPDVRQLVRALLQREASKR 497
Cdd:cd06612 174 ----IGYnNKADIWSLGITAIEMAEGKPPY-----SDIHPMRaifmIPNKPPPTLsdPEKWSPEFNDFVKKCLVKDPEER 244

                ...
gi 14165272 498 PSA 500
Cdd:cd06612 245 PSA 247
STKc_YPK1_like cd05585
Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the ...
350-497 5.26e-06

Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270737 [Multi-domain]  Cd Length: 313  Bit Score: 48.72  E-value: 5.26e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCladesiglQLPFSSwyVDRGGNGC----LMAPEVSTARpgp 425
Cdd:cd05585 107 LECLHKFNVIYRDLKPENIL--LDYTG--HIALCDFGLC--------KLNMKD--DDKTNTFCgtpeYLAPELLLGH--- 169
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 426 raviDYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLpaLPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05585 170 ----GYTKAvDWWTLGVLLYEMLTGLPPFYDENTNEMYRKILQEPLR--FPDGFDRDAKDLLIGLLNRDPTKR 236
STKc_Chk2 cd14084
Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze ...
349-500 5.44e-06

Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Checkpoint Kinase 2 (Chk2) plays an important role in cellular responses to DNA double-strand breaks and related lesions. It is phosphorylated and activated by ATM kinase, resulting in its dissociation from sites of damage to phosphorylate downstream targets such as BRCA1, p53, cell cycle transcription factor E2F1, the promyelocytic leukemia protein (PML) involved in apoptosis, and CDC25 phosphatases, among others. Mutations in Chk2 is linked to a variety of cancers including familial breast cancer, myelodysplastic syndromes, prostate cancer, lung cancer, and osteosarcomas. Chk2 contains an N-terminal SQ/TQ cluster domain (SCD), a central forkhead-associated (FHA) domain, and a C-terminal catalytic kinase domain. The Chk2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270986 [Multi-domain]  Cd Length: 275  Bit Score: 48.16  E-value: 5.44e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDGCpWLVIADFGCC--LADESIGLQLPFSSWYVdrggngclmAPEVSTArpgpR 426
Cdd:cd14084 123 AVKYLHSNGIIHRDLKPENVLLSSQEEEC-LIKITDFGLSkiLGETSLMKTLCGTPTYL---------APEVLRS----F 188
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 427 AVIDYSKA-DAWAVGAIAYEIFGLVNPFYGQ------------GKAHLESRSYQEAQLPALpesvppdvrQLVRALLQRE 493
Cdd:cd14084 189 GTEGYTRAvDCWSLGVILFICLSGYPPFSEEytqmslkeqilsGKYTFIPKAWKNVSEEAK---------DLVKKMLVVD 259

                ....*..
gi 14165272 494 ASKRPSA 500
Cdd:cd14084 260 PSRRPSI 266
STKc_PKB_gamma cd05593
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); ...
349-497 6.04e-06

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270745 [Multi-domain]  Cd Length: 348  Bit Score: 48.54  E-value: 6.04e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPRAV 428
Cdd:cd05593 127 ALDYLHSGKIVYRDLKLENLM--LDKDG--HIKITDFGLC--KEGITDAATMKTFC----GTPEYLAPEVLEDNDYGRAV 196
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 429 idyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAqlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05593 197 ------DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED--IKFPRTLSADAKSLLSGLLIKDPNKR 257
STKc_NIK cd13991
Catalytic domain of the Serine/Threonine kinase, NF-kappaB Inducing Kinase (NIK); STKs ...
348-501 6.40e-06

Catalytic domain of the Serine/Threonine kinase, NF-kappaB Inducing Kinase (NIK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NIK, also called mitogen activated protein kinase kinase kinase 14 (MAP3K14), phosphorylates and activates Inhibitor of NF-KappaB Kinase (IKK) alpha, which is a regulator of NF-kB proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. NIK is essential in the IKKalpha-mediated non-canonical NF-kB signaling pathway, in which IKKalpha processes the IkB-like C-terminus of NF-kB2/p100 to produce p52, allowing the p52/RelB dimer to migrate to the nucleus where it regulates gene transcription. NIK also plays an important role in Toll-like receptor 7/9 signaling cascades. The NIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270893 [Multi-domain]  Cd Length: 268  Bit Score: 47.89  E-value: 6.40e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDpdgCPWLVIADFG--CCLADESIGLQLpFSSWYVDrgGNGCLMAPEVSTARPGP 425
Cdd:cd13991 109 EGLEYLHSRKILHGDVKADNVLLSSD---GSDAFLCDFGhaECLDPDGLGKSL-FTGDYIP--GTETHMAPEVVLGKPCD 182
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 426 ravidySKADAWAVGAIAYEIFGLVNPF--YGQGKAHLESRSyQEAQLPALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd13991 183 ------AKVDVWSSCCMMLHMLNGCHPWtqYYSGPLCLKIAN-EPPPLREIPPSCAPLTAQAIQAGLRKEPVHRASAA 253
PTZ00263 PTZ00263
protein kinase A catalytic subunit; Provisional
351-497 6.45e-06

protein kinase A catalytic subunit; Provisional


Pssm-ID: 140289 [Multi-domain]  Cd Length: 329  Bit Score: 48.28  E-value: 6.45e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  351 DHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccladesiglqlpFSSWYVDRGGNGC----LMAPEVSTARPGPR 426
Cdd:PTZ00263 132 EYLHSKDIIYRDLKPENLL--LDNKGH--VKVTDFG-------------FAKKVPDRTFTLCgtpeYLAPEVIQSKGHGK 194
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272  427 AVidyskaDAWAVGAIAYEIFGLVNPFYGQGKAhlesRSYQ---EAQLpALPESVPPDVRQLVRALLQREASKR 497
Cdd:PTZ00263 195 AV------DWWTMGVLLYEFIAGYPPFFDDTPF----RIYEkilAGRL-KFPNWFDGRARDLVKGLLQTDHTKR 257
STKc_LATS cd05598
Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor; STKs catalyze the ...
357-497 6.61e-06

Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270749 [Multi-domain]  Cd Length: 333  Bit Score: 48.47  E-value: 6.61e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVelDPDGcpWLVIADFGCCladesIGLQLPF-SSWYVDRG--GNGCLMAPEVsTARPGpravidYSK 433
Cdd:cd05598 121 GFIHRDIKPDNILI--DRDG--HIKLTDFGLC-----TGFRWTHdSKYYLAHSlvGTPNYIAPEV-LLRTG------YTQ 184
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 434 A-DAWAVGAIAYE-IFGLVnPFYGQGKAHLESRS---YQEAQLPALPEsVPPDVRQLVRALLqREASKR 497
Cdd:cd05598 185 LcDWWSVGVILYEmLVGQP-PFLAQTPAETQLKVinwRTTLKIPHEAN-LSPEAKDLILRLC-CDAEDR 250
STKc_DAPK1 cd14194
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs ...
348-497 7.02e-06

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. It is Ca2+/calmodulin (CaM)-regulated and actin-associated protein that contains an N-terminal kinase domain followed by an autoinhibitory CaM binding region and a large C-terminal extension with multiple functional domains including ankyrin (ANK) repeats, a cytoskeletal binding domain, a Death domain, and a serine-rich tail. Loss of DAPK1 expression, usually because of DNA methylation, is implicated in many tumor types. DAPK1 is highly abundant in the brain and has also been associated with neurodegeneration. The DAPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271096 [Multi-domain]  Cd Length: 269  Bit Score: 48.09  E-value: 7.02e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDGC-PWLVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEVSTARP-Gp 425
Cdd:cd14194 119 NGVYYLHSLQIAHFDLKPENIML-LDRNVPkPRIKIIDFG-------LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPlG- 189
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 426 ravidySKADAWAVGAIAYEIFGLVNPFYGQGK----AHLESRSYQ-EAQLPALPESVPPDvrqLVRALLQREASKR 497
Cdd:cd14194 190 ------LEADMWSIGVITYILLSGASPFLGDTKqetlANVSAVNYEfEDEYFSNTSALAKD---FIRRLLVKDPKKR 257
STKc_beta_ARK cd05606
Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs ...
349-497 7.14e-06

Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The beta-ARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270757 [Multi-domain]  Cd Length: 279  Bit Score: 47.82  E-value: 7.14e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFG--CCLADesiglQLPFSSwyvdRGGNGcLMAPEVSTarpgpR 426
Cdd:cd05606 110 GLEHMHNRFIVYRDLKPANIL--LDEHG--HVRISDLGlaCDFSK-----KKPHAS----VGTHG-YMAPEVLQ-----K 170
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 427 AVIDYSKADAWAVGAIAYEIFGLVNPFYGQ-GKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05606 171 GVAYDSSADWFSLGCMLYKLLKGHSPFRQHkTKDKHEIDRMTLTMNVELPDSFSPELKSLLEGLLQRDVSKR 242
STKc_NUAK2 cd14161
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs ...
355-499 7.18e-06

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. NUAK2 is implicated in regulating actin stress fiber assembly through its association with myosin phosphatase Rho-interacting protein (MRIP), which leads to an increase in myosin regulatory light chain (MLC) phosphorylation. It is also associated with tumor growth, migration, and oncogenicity of melanoma cells. The NUAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271063 [Multi-domain]  Cd Length: 255  Bit Score: 47.64  E-value: 7.18e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 355 QQGIAHRDLKSDNILveLDPDGCpwLVIADFGCcladESIGLQLPFSSWYVdrgGNGCLMAPEVSTARP--GPravidys 432
Cdd:cd14161 120 ANGIVHRDLKLENIL--LDANGN--IKIADFGL----SNLYNQDKFLQTYC---GSPLYASPEIVNGRPyiGP------- 181
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 433 KADAWAVGAIAYEIFGLVNPFYGQGK----AHLESRSYQEAqlpalpeSVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14161 182 EVDSWSLGVLLYILVHGTMPFDGHDYkilvKQISSGAYREP-------TKPSDACGLIRWLLMVNPERRAT 245
STKc_GRK7 cd05607
Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7; ...
349-501 7.21e-06

Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK7 (also called iodopsin kinase) belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270758 [Multi-domain]  Cd Length: 286  Bit Score: 47.98  E-value: 7.21e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpwlviadfGCCLADESIGLQLPFSSWYVDRGGNGCLMAPEVSTARPgprav 428
Cdd:cd05607 116 GILHLHSLKIVYRDMKPENVL--LDDNG---------NCRLSDLGLAVEVKEGKPITQRAGTNGYMAPEILKEES----- 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 idYS-KADAWAVGAIAYEIFGLVNPFygqgKAHLESRSYQEAQLPALPESV-------PPDVRQLVRALLQREASKRPSA 500
Cdd:cd05607 180 --YSyPVDWFAMGCSIYEMVAGRTPF----RDHKEKVSKEELKRRTLEDEVkfehqnfTEEAKDICRLFLAKKPENRLGS 253

                .
gi 14165272 501 R 501
Cdd:cd05607 254 R 254
STKc_DRAK cd14106
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
348-500 7.22e-06

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs, also called STK17, were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. They may play a role in apoptotic signaling. The DRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271008 [Multi-domain]  Cd Length: 268  Bit Score: 47.73  E-value: 7.22e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFG-CCLADESIGLQlpfsswyvDRGGNGCLMAPEVSTARPgpr 426
Cdd:cd14106 119 EGVQYLHERNIVHLDLKPQNILLTSEFPLGD-IKLCDFGiSRVIGEGEEIR--------EILGTPDYVAPEILSYEP--- 186
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 427 avIDYSkADAWAVGAIAYEIFGLVNPFYGQGKahlesrsyQEAQL----------PALPESVPPDVRQLVRALLQREASK 496
Cdd:cd14106 187 --ISLA-TDMWSIGVLTYVLLTGHSPFGGDDK--------QETFLnisqcnldfpEELFKDVSPLAIDFIKRLLVKDPEK 255

                ....
gi 14165272 497 RPSA 500
Cdd:cd14106 256 RLTA 259
STKc_RSK4_C cd14177
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 4 (also called ...
350-453 7.65e-06

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 4 (also called Ribosomal protein S6 kinase alpha-6 or 90kDa ribosomal protein S6 kinase 6); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK4 is also called S6K-alpha-6, RPS6KA6, p90RSK6 or pp90RSK4. RSK4 is a substrate of ERK and is a modulator of p53-dependent proliferation arrest in human cells. Deletion of the RSK4 gene, RPS6KA6, frequently occurs in patients of X-linked deafness type 3, mental retardation and choroideremia. Studies of RSK4 in cancer cells and tissues suggest that it may be oncogenic or tumor suppressive depending on many factors. RSK4 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271079 [Multi-domain]  Cd Length: 295  Bit Score: 48.09  E-value: 7.65e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGccladesIGLQLpfsswyvdRGGNGCLMAPEVSTARPGPRAVI 429
Cdd:cd14177 111 VDYLHCQGVVHRDLKPSNILYMDDSANADSIRICDFG-------FAKQL--------RGENGLLLTPCYTANFVAPEVLM 175
                        90       100
                ....*....|....*....|....*..
gi 14165272 430 D--YSKA-DAWAVGAIAYEIFGLVNPF 453
Cdd:cd14177 176 RqgYDAAcDIWSLGVLLYTMLAGYTPF 202
STKc_Rim15_like cd05611
Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the ...
349-506 7.93e-06

Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. The Rim15-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270762 [Multi-domain]  Cd Length: 263  Bit Score: 47.86  E-value: 7.93e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVeldpDGCPWLVIADFGCcladESIGLQLPFSSWYVdrgGNGCLMAPEVSTARPGPRAV 428
Cdd:cd05611 109 GVEDLHQRGIIHRDIKPENLLI----DQTGHLKLTDFGL----SRNGLEKRHNKKFV---GTPDYLAPETILGVGDDKMS 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 idyskaDAWAVGAIAYEIFGLVNPFYGQGK----AHLESRsyqEAQLPA-LPESVPPDVRQLVRALLQREASKRPSARVA 503
Cdd:cd05611 178 ------DWWSLGCVIFEFLFGYPPFHAETPdavfDNILSR---RINWPEeVKEFCSPEAVDLINRLLCMDPAKRLGANGY 248

                ...
gi 14165272 504 ANV 506
Cdd:cd05611 249 QEI 251
PKc_MKK7 cd06618
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
354-498 9.22e-06

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 7; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270791 [Multi-domain]  Cd Length: 295  Bit Score: 47.75  E-value: 9.22e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 354 VQQGIAHRDLKSDNILveLDPDGCPWLviADFGccladesiglqlpFSSWYVDRGGN----GC--LMAPEVSTARPGPRA 427
Cdd:cd06618 132 EKHGVIHRDVKPSNIL--LDESGNVKL--CDFG-------------ISGRLVDSKAKtrsaGCaaYMAPERIDPPDNPKY 194
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 428 VIdysKADAWAVGAIAYEIFGLVNPFYG-QGKAHLESRSYQEAqLPALP--ESVPPDVRQLVRALLQREASKRP 498
Cdd:cd06618 195 DI---RADVWSLGISLVELATGQFPYRNcKTEFEVLTKILNEE-PPSLPpnEGFSPDFCSFVDLCLTKDHRYRP 264
STKc_PAK_II cd06648
Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze ...
350-500 1.01e-05

Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270815 [Multi-domain]  Cd Length: 261  Bit Score: 47.44  E-value: 1.01e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGCCladESIGLQLPFSSWYVdrgGNGCLMAPEVSTARP-GPRav 428
Cdd:cd06648 116 LSFLHSQGVIHRDIKSDSIL--LTSDGR--VKLSDFGFC---AQVSKEVPRRKSLV---GTPYWMAPEVISRLPyGTE-- 183
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 429 idyskADAWAVGAIAYEIFGLVNPFYgqGKAHLES-RSYQEAQLPAL--PESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06648 184 -----VDIWSLGIMVIEMVDGEPPYF--NEPPLQAmKRIRDNEPPKLknLHKVSPRLRSFLDRMLVRDPAQRATA 251
STKc_MRCK_beta cd05624
Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control ...
350-492 1.04e-05

Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase (MRCK) beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MRCK-beta is expressed ubiquitously in many tissues. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. The MRCK-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This alignment model includes the dimerization domain.


Pssm-ID: 270774 [Multi-domain]  Cd Length: 409  Bit Score: 48.08  E-value: 1.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIG-LQLPFSSWYVDRGGNGCLMAPEVSTARPGPrav 428
Cdd:cd05624 186 IHSIHQLHYVHRDIKPDNVL--LDMNG--HIRLADFGSCLKMNDDGtVQSSVAVGTPDYISPEILQAMEDGMGKYGP--- 258
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 429 idysKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVpPDVRQLVRALLQR 492
Cdd:cd05624 259 ----ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHV-TDVSEEAKDLIQR 317
STKc_CASK cd14094
Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein ...
348-505 1.06e-05

Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CASK belongs to the MAGUK (membrane-associated guanylate kinase) protein family, which functions as multiple domain adaptor proteins and is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The enzymatically inactive GuK domain in MAGUK proteins mediates protein-protein interactions and associates intramolecularly with the SH3 domain. In addition, CASK contains a catalytic kinase and two L27 domains. It is highly expressed in the nervous system and plays roles in synaptic protein targeting, neural development, and regulation of gene expression. Binding partners include parkin (a Parkinson's disease molecule), neurexin (adhesion molecule), syndecans, calcium channel proteins, CINAP (nucleosome assembly protein), transcription factor Tbr-1, and the cytoplasmic adaptor proteins Mint1, Veli/mLIN-7/MALS, SAP97, caskin, and CIP98. Deletion or mutations in the CASK gene have been implicated in X-linked mental retardation. The CASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270996 [Multi-domain]  Cd Length: 300  Bit Score: 47.54  E-value: 1.06e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFGccladesIGLQLPfSSWYVDRGGNGC--LMAPEVSTARPgp 425
Cdd:cd14094 120 EALRYCHDNNIIHRDVKPHCVLLASKENSAP-VKLGGFG-------VAIQLG-ESGLVAGGRVGTphFMAPEVVKREP-- 188
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 426 ravidYSK-ADAWAVGAIAYEIFGLVNPFYGQGKAHLE-----SRSYQEAQLPALPESvppdVRQLVRALLQREASKRPS 499
Cdd:cd14094 189 -----YGKpVDVWGCGVILFILLSGCLPFYGTKERLFEgiikgKYKMNPRQWSHISES----AKDLVRRMLMLDPAERIT 259

                ....*.
gi 14165272 500 ARVAAN 505
Cdd:cd14094 260 VYEALN 265
STKc_MLK4 cd14146
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the ...
358-499 1.07e-05

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK4 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The specific function of MLK4 is yet to be determined. Mutations in the kinase domain of MLK4 have been detected in colorectal cancers. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271048 [Multi-domain]  Cd Length: 268  Bit Score: 47.34  E-value: 1.07e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNIL----VELDPDGCPWLVIADFGccLADEsiglqlpfssWY----VDRGGNGCLMAPEVSTARPgpravi 429
Cdd:cd14146 126 ILHRDLKSSNILllekIEHDDICNKTLKITDFG--LARE----------WHrttkMSAAGTYAWMAPEVIKSSL------ 187
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 430 dYSK-ADAWAVGAIAYEIFGLVNPFYG-QGKAHLESRSYQEAQLPaLPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14146 188 -FSKgSDIWSYGVLLWELLTGEVPYRGiDGLAVAYGVAVNKLTLP-IPSTCPEPFAKLMKECWEQDPHIRPS 257
STKc_TLK cd13990
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; STKs catalyze the ...
356-510 1.09e-05

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. They phosphorylate and regulate Anti-silencing function 1 protein (Asf1), a histone H3/H4 chaperone that helps facilitate the assembly of chromatin following DNA replication during S phase. TLKs also phosphorylate the H3 histone tail and are essential in transcription. Vertebrates contain two subfamily members, TLK1 and TLK2. The TLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270892 [Multi-domain]  Cd Length: 279  Bit Score: 47.31  E-value: 1.09e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 356 QGIAHRDLKSDNIL-VELDPDGCpwLVIADFGCC--LADESI---GLQLpfSS------WYvdrggngclMAPEVSTARP 423
Cdd:cd13990 126 PPIIHYDLKPGNILlHSGNVSGE--IKITDFGLSkiMDDESYnsdGMEL--TSqgagtyWY---------LPPECFVVGK 192
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 GPRAVidYSKADAWAVGAIAYEIFGLVNPFyGQG---KAHLESRSYQEA---QLPALPeSVPPDVRQLVRALLQREASKR 497
Cdd:cd13990 193 TPPKI--SSKVDVWSVGVIFYQMLYGRKPF-GHNqsqEAILEENTILKAtevEFPSKP-VVSSEAKDFIRRCLTYRKEDR 268
                       170
                ....*....|...
gi 14165272 498 PsarvaaNVLHLS 510
Cdd:cd13990 269 P------DVLQLA 275
PTKc_Fes_like cd05041
Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; ...
349-508 1.10e-05

Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions.


Pssm-ID: 270637 [Multi-domain]  Cd Length: 251  Bit Score: 47.05  E-value: 1.10e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLADE------SIGL-QLPFSsWyvdrggngclMAPE-VST 420
Cdd:cd05041 106 GMEYLESKNCIHRDLAARNCLVGENNV----LKISDFGMSREEEdgeytvSDGLkQIPIK-W----------TAPEaLNY 170
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 421 ARpgpravidY-SKADAWAVGAIAYEIFGL-VNPFYGQGKAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRP 498
Cdd:cd05041 171 GR--------YtSESDVWSFGILLWEIFSLgATPYPGMSNQQTREQIESGYRMPA-PELCPEAVYRLMLQCWAYDPENRP 241
                       170
                ....*....|
gi 14165272 499 SARVAANVLH 508
Cdd:cd05041 242 SFSEIYNELQ 251
STKc_PKB_alpha cd05594
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B alpha (also called Akt1); ...
349-497 1.24e-05

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B alpha (also called Akt1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270746 [Multi-domain]  Cd Length: 356  Bit Score: 47.72  E-value: 1.24e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHL-VQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd05594 137 ALDYLhSEKNVVYRDLKLENLM--LDKDG--HIKITDFGLC--KEGIKDGATMKTFC----GTPEYLAPEVLEDNDYGRA 206
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 VidyskaDAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAqlPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05594 207 V------DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLSPEAKSLLSGLLKKDPKQR 268
STKc_CCRK cd07832
Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the ...
348-446 1.25e-05

Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed; this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270826 [Multi-domain]  Cd Length: 287  Bit Score: 47.32  E-value: 1.25e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVelDPDGCpwLVIADFGccLAD-ESIGLQLPFSS-----WYvdrggngclMAPEVSTA 421
Cdd:cd07832 111 KGVAYMHANRIMHRDLKPANLLI--SSTGV--LKIADFG--LARlFSEEDPRLYSHqvatrWY---------RAPELLYG 175
                        90       100
                ....*....|....*....|....*.
gi 14165272 422 RPgpraviDYSKA-DAWAVGAIAYEI 446
Cdd:cd07832 176 SR------KYDEGvDLWAVGCIFAEL 195
STKc_GRK5 cd05632
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs ...
349-497 1.30e-05

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270780 [Multi-domain]  Cd Length: 313  Bit Score: 47.27  E-value: 1.30e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEV-STARPGpra 427
Cdd:cd05632 116 GLEDLHRENTVYRDLKPENIL--LDDYG--HIRISDLG-------LAVKIPEGESIRGRVGTVGYMAPEVlNNQRYT--- 181
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 428 vidySKADAWAVGAIAYEIFGLVNPFYGQ----GKAHLESRSYQEAQlpALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05632 182 ----LSPDYWGLGCLIYEMIEGQSPFRGRkekvKREEVDRRVLETEE--VYSAKFSEEAKSICKMLLTKDPKQR 249
STKc_SLK cd06643
Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer ...
348-500 1.63e-05

Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270811 [Multi-domain]  Cd Length: 283  Bit Score: 46.94  E-value: 1.63e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCClADESIGLQLPFSswYVdrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd06643 114 EALVYLHENKIIHRDLKAGNILFTLDGD----IKLADFGVS-AKNTRTLQRRDS--FI---GTPYWMAPEVVMCETSKDR 183
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 428 VIDYsKADAWAVGAIAYEIFGLVNPFYGQGKAH-LESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06643 184 PYDY-KADVWSLGVTLIEMAQIEPPHHELNPMRvLLKIAKSEPPTLAQPSRWSPEFKDFLRKCLEKNVDARWTT 256
STKc_CaMKIV cd14085
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
348-454 1.67e-05

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type IV; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKIV is found predominantly in neurons and immune cells. It is activated by the binding of calcium/CaM and phosphorylation by CaMKK (alpha or beta). The CaMKK-CaMKIV cascade participates in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors. It also is implicated in T-cell development and signaling, cytokine secretion, and signaling through Toll-like receptors, and is thus, pivotal in immune response and inflammation. The CaMKIV subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270987 [Multi-domain]  Cd Length: 294  Bit Score: 47.13  E-value: 1.67e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFGCC-LADESIGLQLPFsswyvdrgGNGCLMAPEVSTARPGPR 426
Cdd:cd14085 109 EAVAYLHENGIVHRDLKPENLLYATPAPDAP-LKIADFGLSkIVDQQVTMKTVC--------GTPGYCAPEILRGCAYGP 179
                        90       100
                ....*....|....*....|....*...
gi 14165272 427 AVidyskaDAWAVGAIAYEIFGLVNPFY 454
Cdd:cd14085 180 EV------DMWSVGVITYILLCGFEPFY 201
STKc_MRCK_alpha cd05623
Catalytic domain of the Serine/Threonine Kinase, DMPK-related cell division control protein 42 ...
349-490 1.69e-05

Catalytic domain of the Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase (MRCK) alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MRCK-alpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. The MRCK-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This alignment model includes the dimerization domain.


Pssm-ID: 270773 [Multi-domain]  Cd Length: 409  Bit Score: 47.32  E-value: 1.69e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLADESIG-LQLPFSSWYVDRGGNGCLMAPEVSTARPGPra 427
Cdd:cd05623 185 AIDSVHQLHYVHRDIKPDNILMDMNGH----IRLADFGSCLKLMEDGtVQSSVAVGTPDYISPEILQAMEDGKGKYGP-- 258
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 428 vidysKADAWAVGAIAYEIFGLVNPFYGQG--KAHLESRSYQEA-QLPALPESVPPDVRQLVRALL 490
Cdd:cd05623 259 -----ECDWWSLGVCMYEMLYGETPFYAESlvETYGKIMNHKERfQFPTQVTDVSENAKDLIRRLI 319
STKc_Nek9 cd08221
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
350-500 1.69e-05

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Nek9 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270860 [Multi-domain]  Cd Length: 256  Bit Score: 46.65  E-value: 1.69e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNI------LVELdpdgcpwlviADFGCC--------LADESIGlqlpfSSWYvdrggngclMA 415
Cdd:cd08221 114 VSHIHKAGILHRDIKTLNIfltkadLVKL----------GDFGISkvldsessMAESIVG-----TPYY---------MS 169
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 416 PEVSTARPgpravidYS-KADAWAVGAIAYEIFGLVNPFYG-----------QGKAHLESRSYQEAqlpalpesvppdVR 483
Cdd:cd08221 170 PELVQGVK-------YNfKSDIWAVGCVLYELLTLKRTFDAtnplrlavkivQGEYEDIDEQYSEE------------II 230
                       170
                ....*....|....*..
gi 14165272 484 QLVRALLQREASKRPSA 500
Cdd:cd08221 231 QLVHDCLHQDPEDRPTA 247
STKc_CDK9_like cd07840
Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs ...
348-447 1.80e-05

Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270832 [Multi-domain]  Cd Length: 291  Bit Score: 46.79  E-value: 1.80e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGC--CLADESiglQLPFSS-----WYvdRggngclmAPEV-- 418
Cdd:cd07840 115 EGLQYLHSNGILHRDIKGSNIL--INNDGV--LKLADFGLarPYTKEN---NADYTNrvitlWY--R-------PPELll 178
                        90       100       110
                ....*....|....*....|....*....|.
gi 14165272 419 -STarpgpraviDYSKA-DAWAVGAIAYEIF 447
Cdd:cd07840 179 gAT---------RYGPEvDMWSVGCILAELF 200
STKc_PKB cd05571
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer ...
350-497 2.01e-05

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of phosphoinositide 3-kinase (PI3K) and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270723 [Multi-domain]  Cd Length: 322  Bit Score: 46.97  E-value: 2.01e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGlqlpfsswyvDRGGNGC----LMAPEVSTARpgp 425
Cdd:cd05571 108 LGYLHSQGIVYRDLKLENLL--LDKDG--HIKITDFGLCKEEISYG----------ATTKTFCgtpeYLAPEVLEDN--- 170
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 426 raviDYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQlpALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05571 171 ----DYGRAvDWWGLGVVMYEMMCGRLPFYNRDHEVLFELILMEEV--RFPSTLSPEAKSLLAGLLKKDPKKR 237
STKc_TNIK cd06637
Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs ...
349-446 2.07e-05

Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270807 [Multi-domain]  Cd Length: 296  Bit Score: 46.64  E-value: 2.07e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLA-DESIGLQLPFSswyvdrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd06637 123 GLSHLHQHKVIHRDIKGQNVLLTENAE----VKLVDFGVSAQlDRTVGRRNTFI-------GTPYWMAPEVIACDENPDA 191
                        90
                ....*....|....*....
gi 14165272 428 VIDYsKADAWAVGAIAYEI 446
Cdd:cd06637 192 TYDF-KSDLWSLGITAIEM 209
STKc_A-Raf cd14150
Catalytic domain of the Serine/Threonine Kinase, A-Raf (Rapidly Accelerated Fibrosarcoma) ...
348-498 2.10e-05

Catalytic domain of the Serine/Threonine Kinase, A-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. A-Raf cooperates with C-Raf in regulating ERK transient phosphorylation that is associated with cyclin D expression and cell cycle progression. Mice deficient in A-Raf are born alive but show neurological and intestinal defects. A-Raf demonstrates low kinase activity to MEK, compared with B- and C-Raf, and may also have alternative functions other than in the ERK signaling cascade. It regulates the M2 type pyruvate kinase, a key glycolytic enzyme. It also plays a role in endocytic membrane trafficking. A-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. It functions in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The A-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271052 [Multi-domain]  Cd Length: 265  Bit Score: 46.55  E-value: 2.10e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVEldpDGcpWLV-IADFGccLAdeSIGLQLPFSSWYVDRGGNGCLMAPEV-STARPGP 425
Cdd:cd14150 107 QGMDYLHAKNIIHRDLKSNNIFLH---EG--LTVkIGDFG--LA--TVKTRWSGSQQVEQPSGSILWMAPEViRMQDTNP 177
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 426 ravidYS-KADAWAVGAIAYEIFGLVNPFYGQGK----AHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRP 498
Cdd:cd14150 178 -----YSfQSDVYAYGVVLYELMSGTLPYSNINNrdqiIFMVGRGYLSPDLSKLSSNCPKAMKRLLIDCLKFKREERP 250
STKc_PAK5 cd06658
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the ...
348-500 2.17e-05

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. PAK5 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132989 [Multi-domain]  Cd Length: 292  Bit Score: 46.57  E-value: 2.17e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCladESIGLQLPFSSWYVdrgGNGCLMAPEVSTARPGPra 427
Cdd:cd06658 129 RALSYLHNQGVIHRDIKSDSIL--LTSDG--RIKLSDFGFC---AQVSKEVPKRKSLV---GTPYWMAPEVISRLPYG-- 196
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 428 vidySKADAWAVGAIAYEIFGLVNPFYGQGKAHlESRSYQEAQLPALPES--VPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06658 197 ----TEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRRIRDNLPPRVKDShkVSSVLRGFLDLMLVREPSQRATA 266
STKc_PIM cd14005
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
348-499 2.22e-05

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are two PIM1 and three PIM2 isoforms as a result of alternative translation initiation sites, while there is only one PIM3 protein. Compound knockout mice deficient of all three PIM kinases that survive the perinatal period show a profound reduction in body size, indicating that PIMs are important for body growth. The PIM subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270907 [Multi-domain]  Cd Length: 255  Bit Score: 46.08  E-value: 2.22e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDpDGCPWLViaDFGCC--LADesiglqlpfsSWYVDRGGNGCLMAPE-VSTAR-- 422
Cdd:cd14005 118 EAVRHCHQRGVLHRDIKDENLLINLR-TGEVKLI--DFGCGalLKD----------SVYTDFDGTRVYSPPEwIRHGRyh 184
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 423 PGPRAVidyskadaWAVGAIAYEifgLVNpfygqGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14005 185 GRPATV--------WSLGILLYD---MLC-----GDIPFENDEQILRGNVLFRPRLSKECCDLISRCLQFDPSKRPS 245
STKc_cPKC cd05587
Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; ...
349-497 2.30e-05

Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. cPKCs are potent kinases for histones, myelin basic protein, and protamine. They depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270739 [Multi-domain]  Cd Length: 320  Bit Score: 46.62  E-value: 2.30e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIglqlpfssWYVDRGGNGC----LMAPEVSTARPg 424
Cdd:cd05587 109 GLFFLHSKGIIYRDLKLDNVM--LDAEG--HIKIADFGMC--KEGI--------FGGKTTRTFCgtpdYIAPEIIAYQP- 173
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 425 pravidYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESrSYQEaQLPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05587 174 ------YGKSvDWWAYGVLLYEMLAGQPPFDGEDEDELFQ-SIME-HNVSYPKSLSKEAVSICKGLLTKHPAKR 239
STKc_NUAK cd14073
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze ...
355-497 2.42e-05

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK1, also called ARK5 (AMPK-related protein kinase 5), regulates cell proliferation and displays tumor suppression through direct interaction and phosphorylation of p53. It is also involved in cell senescence and motility. High NUAK1 expression is associated with invasiveness of nonsmall cell lung cancer (NSCLC) and breast cancer cells. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. The NUAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270975 [Multi-domain]  Cd Length: 254  Bit Score: 46.23  E-value: 2.42e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 355 QQGIAHRDLKSDNILveLDPDGCpwLVIADFGccladesiglqlpFSSWYVDRG------GNGCLMAPEVSTARP--GPr 426
Cdd:cd14073 119 KNGVVHRDLKLENIL--LDQNGN--AKIADFG-------------LSNLYSKDKllqtfcGSPLYASPEIVNGTPyqGP- 180
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 427 avidysKADAWAVGAIAYEIFGLVNPFYGQGKAHL----ESRSYQEaqlpalPESvPPDVRQLVRALLQREASKR 497
Cdd:cd14073 181 ------EVDCWSLGVLLYTLVYGTMPFDGSDFKRLvkqiSSGDYRE------PTQ-PSDASGLIRWMLTVNPKRR 242
STKc_Kin4 cd14076
Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the ...
349-453 2.65e-05

Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Kin4 is a central component of the spindle position checkpoint (SPOC), which monitors spindle position and regulates the mitotic exit network (MEN). Kin4 associates with spindle pole bodies in mother cells to inhibit MEN signaling and delay mitosis until the anaphase nucleus is properly positioned along the mother-bud axis. Kin4 activity is regulated by both the bud neck-associated kinase Elm1 and protein phosphatase 2A. The Kin4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270978 [Multi-domain]  Cd Length: 270  Bit Score: 46.32  E-value: 2.65e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLA-DESIGLQLPFSSwyvdrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd14076 118 GVAYLHKKGVVHRDLKLENLLLDKNRN----LVITDFGFANTfDHFNGDLMSTSC------GSPCYAAPELVVSDSMYAG 187
                        90       100
                ....*....|....*....|....*.
gi 14165272 428 vidySKADAWAVGAIAYEIFGLVNPF 453
Cdd:cd14076 188 ----RKADIWSCGVILYAMLAGYLPF 209
STKc_MLCK1 cd14191
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1; STKs catalyze ...
348-455 3.01e-05

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK1 (or MYLK1) phosphorylates myosin regulatory light chain and controls the contraction of smooth muscles. The MLCK1 gene expresses three transcripts in a cell-specific manner: a short MLCK1 which contains three immunoglobulin (Ig)-like and one fibronectin type III (FN3) domains, PEVK and actin-binding regions, and a kinase domain near the C-terminus followed by a regulatory segment containing an autoinhibitory Ca2+/calmodulin binding site; a long MLCK1 containing six additional Ig-like domains at the N-terminus compared to the short MLCK1; and the C-terminal Ig module which results in the expression of telokin in phasic smooth muscles, leading to Ca2+ desensitization by cyclic nucleotides of smooth muscle force. MLCK1 is also responsible for myosin regulatory light chain phosphorylation in nonmuscle cells and may play a role in regulating myosin II ATPase activity. The MLCK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271093 [Multi-domain]  Cd Length: 259  Bit Score: 45.77  E-value: 3.01e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeLDPDGCPWLVIaDFGCCLADESIG-LQLPFsswyvdrgGNGCLMAPEVSTARPgpr 426
Cdd:cd14191 111 EGVEYIHKQGIVHLDLKPENIMC-VNKTGTKIKLI-DFGLARRLENAGsLKVLF--------GTPEFVAPEVINYEP--- 177
                        90       100
                ....*....|....*....|....*....
gi 14165272 427 avIDYSkADAWAVGAIAYEIFGLVNPFYG 455
Cdd:cd14191 178 --IGYA-TDMWSIGVICYILVSGLSPFMG 203
STKc_MLK cd14061
Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the ...
358-499 3.19e-05

Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Mammals have four MLKs (MLK1-4), mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270963 [Multi-domain]  Cd Length: 258  Bit Score: 45.85  E-value: 3.19e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNIL----VELDPDGCPWLVIADFGccLADEsiglqlpfssWY----VDRGGNGCLMAPEVSTARPgpravi 429
Cdd:cd14061 116 IIHRDLKSSNILileaIENEDLENKTLKITDFG--LARE----------WHkttrMSAAGTYAWMAPEVIKSST------ 177
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 430 dYSKA-DAWAVGAIAYEIFGLVNPFYG-QGKAHLESRSYQEAQLPaLPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14061 178 -FSKAsDVWSYGVLLWELLTGEVPYKGiDGLAVAYGVAVNKLTLP-IPSTCPEPFAQLMKDCWQPDPHDRPS 247
PK_eIF2AK_GCN2_rpt1 cd14012
Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or ...
348-500 3.33e-05

Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: GCN2, protein kinase regulated by RNA (PKR), heme-regulated inhibitor kinase (HRI), and PKR-like endoplasmic reticulum kinase (PERK). GCN2 is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kappaB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. The degenerate pseudokinase domain of GCN2 may function as a regulatory domain. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270914 [Multi-domain]  Cd Length: 254  Bit Score: 45.81  E-value: 3.33e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDP-DGCPWLVIADFGCCLADE-SIGLQLPFSSWYVdrggngclMAPEVST--ARP 423
Cdd:cd14012 115 EALEYLHRNGVVHKSLHAGNVLLDRDAgTGIVKLTDYSLGKTLLDMcSRGSLDEFKQTYW--------LPPELAQgsKSP 186
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 424 GPravidysKADAWAVGAIAYE-IFGLVNPFYgqgkahlesrsYQEAQLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14012 187 TR-------KTDVWDLGLLFLQmLFGLDVLEK-----------YTSPNPVLVSLDLSASLQDFLSKCLSLDPKKRPTA 246
STKc_BMPR2_AMHR2 cd14054
Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and ...
315-447 3.83e-05

Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and Anti-Muellerian Hormone Type II Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR2 and AMHR2 belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors (GDFs), and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. BMPR2 and AMHR2 act primarily as a receptor for BMPs and AMH, respectively. BMPs induce bone and cartilage formation, as well as regulate tooth, kidney, skin, hair, haematopoietic, and neuronal development. Mutations in BMPR2A is associated with familial pulmonary arterial hypertension. AMH is mainly responsible for the regression of Mullerian ducts during male sex differentiation. It is expressed exclusively by somatic cells of the gonads. Mutations in either AMH or AMHR2 cause persistent Mullerian duct syndrome (PMDS), a rare form of male pseudohermaphroditism characterized by the presence of Mullerian derivatives (ovary and tubes) in otherwise normally masculine males. The BMPR2/AMHR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270956 [Multi-domain]  Cd Length: 300  Bit Score: 45.82  E-value: 3.83e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 315 FLVMKNYPC-TLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQ---------GIAHRDLKSDNILVEldPDG-CpwlVIA 383
Cdd:cd14054  70 LLVLEYAPKgSLCSYLRENTLDWMSSCRMALSLTRGLAYLHTDlrrgdqykpAIAHRDLNSRNVLVK--ADGsC---VIC 144
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 384 DFGCcladesiGLQLPFSSWYVDRGGN---------GCL--MAPEVSTARPGPRAVIDYSK-ADAWAVGAIAYEIF 447
Cdd:cd14054 145 DFGL-------AMVLRGSSLVRGRPGAaenasisevGTLryMAPEVLEGAVNLRDCESALKqVDVYALGLVLWEIA 213
STKc_MAPK cd07834
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs ...
357-500 3.89e-05

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270828 [Multi-domain]  Cd Length: 329  Bit Score: 45.98  E-value: 3.89e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVELDPDgcpwLVIADFGccLA--DESIGLQLPFSS-----WYvdRggngclmAPEvstarpgpraVI 429
Cdd:cd07834 123 GVIHRDLKPSNILVNSNCD----LKICDFG--LArgVDPDEDKGFLTEyvvtrWY--R-------APE----------LL 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 430 ----DYSKA-DAWAVGAIAYE-------------------IFGLV------------NPfygQGKAHLESRSYQEAQ-LP 472
Cdd:cd07834 178 lsskKYTKAiDIWSVGCIFAElltrkplfpgrdyidqlnlIVEVLgtpseedlkfisSE---KARNYLKSLPKKPKKpLS 254
                       170       180
                ....*....|....*....|....*...
gi 14165272 473 ALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd07834 255 EVFPGASPEAIDLLEKMLVFNPKKRITA 282
PTKc_Lyn cd05072
Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the ...
348-507 3.90e-05

Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lyn subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270657 [Multi-domain]  Cd Length: 272  Bit Score: 45.80  E-value: 3.90e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVElDPDGCPwlvIADFGCCLADESiglqlpfsSWYVDRGGngcLMAPEVSTArpgPRA 427
Cdd:cd05072 115 EGMAYIERKNYIHRDLRAANVLVS-ESLMCK---IADFGLARVIED--------NEYTAREG---AKFPIKWTA---PEA 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 vIDYS----KADAWAVGAIAYEI--FGLVnPFYGQGKAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd05072 177 -INFGsftiKSDVWSFGILLYEIvtYGKI-PYPGMSNSDVMSALQRGYRMPR-MENCPDELYDIMKTCWKEKAEERPTFD 253

                ....*.
gi 14165272 502 VAANVL 507
Cdd:cd05072 254 YLQSVL 259
STKc_DAPK cd14105
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase; STKs ...
348-458 3.94e-05

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. DAPK2 is also called DAPK-related protein 1 (DRP-1), while DAPK3 has also been named DAP-like kinase (DLK) and zipper-interacting protein kinase (ZIPk). These proteins are ubiquitously expressed in adult tissues, are capable of cross talk with each other, and may act synergistically in regulating cell death. The DAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271007 [Multi-domain]  Cd Length: 269  Bit Score: 45.56  E-value: 3.94e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGccLADEsiglqLPFSSWYVDRGGNGCLMAPEVSTARP-GPr 426
Cdd:cd14105 119 DGVNYLHTKNIAHFDLKPENIMLLDKNVPIPRIKLIDFG--LAHK-----IEDGNEFKNIFGTPEFVAPEIVNYEPlGL- 190
                        90       100       110
                ....*....|....*....|....*....|..
gi 14165272 427 avidysKADAWAVGAIAYEIFGLVNPFYGQGK 458
Cdd:cd14105 191 ------EADMWSIGVITYILLSGASPFLGDTK 216
STKc_PKA cd14209
Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase; STKs catalyze ...
360-497 4.25e-05

Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271111 [Multi-domain]  Cd Length: 290  Bit Score: 45.47  E-value: 4.25e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 360 HRDLKSDNILveLDPDGcpWLVIADFGccladesiglqlpFSSWYVDRGGNGC----LMAPEVSTARPgpravidYSKA- 434
Cdd:cd14209 124 YRDLKPENLL--IDQQG--YIKVTDFG-------------FAKRVKGRTWTLCgtpeYLAPEIILSKG-------YNKAv 179
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 435 DAWAVGAIAYEIFGLVNPFYgqgkAHLESRSYQ---EAQLpALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14209 180 DWWALGVLIYEMAAGYPPFF----ADQPIQIYEkivSGKV-RFPSHFSSDLKDLLRNLLQVDLTKR 240
STKc_MLTK cd14060
Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated ...
358-499 4.31e-05

Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated protein Triple Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLTK, also called zipper sterile-alpha-motif kinase (ZAK), contains a catalytic kinase domain and a leucine zipper. There are two alternatively-spliced variants, MLTK-alpha and MLTK-beta. MLTK-alpha contains a sterile-alpha-motif (SAM) at the C-terminus. MLTK regulates the c-Jun N-terminal kinase, extracellular signal-regulated kinase, p38 MAPK, and NF-kB pathways. ZAK is the MAP3K involved in the signaling cascade that leads to the ribotoxic stress response initiated by cellular damage due to Shiga toxins and ricin. It may also play a role in cell transformation and cancer development. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.The MLTK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270962 [Multi-domain]  Cd Length: 242  Bit Score: 45.33  E-value: 4.31e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNILVELDPDgcpwLVIADFGCC-LADESIGLQLPfsswyvdrgGNGCLMAPEVSTARPGPRAvidyskADA 436
Cdd:cd14060 108 VIHRDLKSRNVVIAADGV----LKICDFGASrFHSHTTHMSLV---------GTFPWMAPEVIQSLPVSET------CDT 168
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 437 WAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14060 169 YSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERPTIPSSCPRSFAELMRRCWEADVKERPS 231
STKc_RSK1_C cd14175
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 1 (also called ...
350-453 4.49e-05

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 1 (also called Ribosomal protein S6 kinase alpha-1 or 90kDa ribosomal protein S6 kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK1 is also called S6K-alpha-1, RPS6KA1, p90RSK1 or MAPK-activated protein kinase 1a (MAPKAPK-1a). It is a component of the insulin transduction pathway, regulating the function of IRS1. It also interacts with PKA and promotes its inactivation. RSK1 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271077 [Multi-domain]  Cd Length: 291  Bit Score: 45.79  E-value: 4.49e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVeLDPDGCP-WLVIADFGccladesIGLQLpfsswyvdRGGNGCLMAPEVSTARPGPRAV 428
Cdd:cd14175 108 VEYLHSQGVVHRDLKPSNILY-VDESGNPeSLRICDFG-------FAKQL--------RAENGLLMTPCYTANFVAPEVL 171
                        90       100
                ....*....|....*....|....*...
gi 14165272 429 I--DYSKA-DAWAVGAIAYEIFGLVNPF 453
Cdd:cd14175 172 KrqGYDEGcDIWSLGILLYTMLAGYTPF 199
STKc_SPEG_rpt2 cd14111
Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle ...
348-501 4.58e-05

Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271013 [Multi-domain]  Cd Length: 257  Bit Score: 45.20  E-value: 4.58e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVEldpdGCPWLVIADFGCCLADESIGLQlPFSSwyvdRGGNGCLMAPEVSTARP-GPr 426
Cdd:cd14111 110 QGLEYLHGRRVLHLDIKPDNIMVT----NLNAIKIVDFGSAQSFNPLSLR-QLGR----RTGTLEYMAPEMVKGEPvGP- 179
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 427 avidysKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYqEAQLPalPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd14111 180 ------PADIWSIGVLTYIMLSGRSPFEDQDPQETEAKIL-VAKFD--AFKLYPNVSQSASLFLKKVLSSYPWSR 245
STKc_PAK2 cd06655
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the ...
348-501 4.91e-05

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. It belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132986 [Multi-domain]  Cd Length: 296  Bit Score: 45.49  E-value: 4.91e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladesiGLQLPFSSWYVDRGGNGCLMAPEVSTARP-GPr 426
Cdd:cd06655 126 QALEFLHANQVIHRDIKSDNVLLGMDGS----VKLTDFGFC------AQITPEQSKRSTMVGTPYWMAPEVVTRKAyGP- 194
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 427 avidysKADAWAVGAIAYEIFGLVNPFYGQGKAH----LESRSYQEAQlpaLPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd06655 195 ------KVDIWSLGIMAIEMVEGEPPYLNENPLRalylIATNGTPELQ---NPEKLSPIFRDFLNRCLEMDVEKRGSAK 264
STKc_DAPK3 cd14195
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 3; STKs ...
348-506 4.94e-05

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK3, also called DAP-like kinase (DLK) and zipper-interacting protein kinase (ZIPk), contains an N-terminal kinase domain and a C-terminal region with nuclear localization signals (NLS) and a leucine zipper motif that mediates homodimerization and interaction with other leucine zipper proteins. It interacts with Par-4, a protein that contains a death domain and interacts with actin filaments. DAPK3 is present in both the cytoplasm and nucleus. Its co-expression with Par-4 results in the co-localization of the two proteins to actin filaments. In addition to cell death, DAPK3 is also implicated in mediating cell motility and the contraction of smooth muscles. The DAPK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271097 [Multi-domain]  Cd Length: 271  Bit Score: 45.38  E-value: 4.94e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEVSTARPGPRa 427
Cdd:cd14195 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG-------IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL- 190
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 428 vidysKADAWAVGAIAYEIFGLVNPFYGQGKAhlESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPSARVAANV 506
Cdd:cd14195 191 -----EADMWSIGVITYILLSGASPFLGETKQ--ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKKRMTIAQ 262
PKc_LIMK_like_unk cd14156
Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs ...
349-499 4.97e-05

Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This group is composed of uncharacterized proteins with similarity to LIMK and Testicular or testis-specific protein kinase (TESK). LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271058 [Multi-domain]  Cd Length: 256  Bit Score: 45.20  E-value: 4.97e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDGCPwLVIADFGccLADESIGLQLPFSSWYVDRGGNGCLMAPEVSTARPGPRav 428
Cdd:cd14156 101 GMVYLHSKNIYHRDLNSKNCLIRVTPRGRE-AVVTDFG--LAREVGEMPANDPERKLSLVGSAFWMAPEMLRGEPYDR-- 175
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 429 idysKADAWAVGAIAYEIFGLV--NP--FYGQGKAHLESRSYQEaqlpaLPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14156 176 ----KVDVFSFGIVLCEILARIpaDPevLPRTGDFGLDVQAFKE-----MVPGCPEPFLDLAASCCRMDAFKRPS 241
STKc_CRIK cd05601
Catalytic domain of the Serine/Threonine Kinase, Citron Rho-interacting kinase; STKs catalyze ...
353-497 5.03e-05

Catalytic domain of the Serine/Threonine Kinase, Citron Rho-interacting kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CRIK (also called citron kinase) is an effector of the small GTPase Rho. It plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. CRIK contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270752 [Multi-domain]  Cd Length: 328  Bit Score: 45.76  E-value: 5.03e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 353 LVQQGIAHRDLKSDNILVeldpDGCPWLVIADFG--CCL-ADESIGLQLPFsswyvdrgGNGCLMAPEVSTArpgpravI 429
Cdd:cd05601 118 LHSMGYVHRDIKPENILI----DRTGHIKLADFGsaAKLsSDKTVTSKMPV--------GTPDYIAPEVLTS-------M 178
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 430 DYSKA-------DAWAVGAIAYE-IFGlVNPFYGQGKAHLESR--SYQEA-QLPALPeSVPPDVRQLVRALLQrEASKR 497
Cdd:cd05601 179 NGGSKgtygvecDWWSLGIVAYEmLYG-KTPFTEDTVIKTYSNimNFKKFlKFPEDP-KVSESAVDLIKGLLT-DAKER 254
STKc_Twitchin_like cd14114
The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs ...
348-503 5.16e-05

The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Caenorhabditis elegans and Aplysia californica Twitchin, Drosophila melanogaster Projectin, and similar proteins. These are very large muscle proteins containing multiple immunoglobulin (Ig)-like and fibronectin type III (FN3) domains and a single kinase domain near the C-terminus. Twitchin and Projectin are both associated with thick filaments. Twitchin is localized in the outer parts of A-bands and is involved in regulating muscle contraction. It interacts with the myofibrillar proteins myosin and actin in a phosphorylation-dependent manner, and may be involved in regulating the myosin cross-bridge cycle. The kinase activity of Twitchen is activated by Ca2+ and the Ca2+ binding protein S100A1. Projectin is associated with the end of thick filaments and is a component of flight muscle connecting filaments. The kinase domain of Projectin may play roles in autophosphorylation and transphosphorylation, which impact the formation of myosin filaments. The Twitchin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271016 [Multi-domain]  Cd Length: 259  Bit Score: 45.27  E-value: 5.16e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGCpwLVIADFGCCL---ADESIGLQLpfsswyvdrgGNGCLMAPEVSTARPg 424
Cdd:cd14114 111 EGLCHMHENNIVHLDIKPENIMCTTKRSNE--VKLIDFGLAThldPKESVKVTT----------GTAEFAAPEIVEREP- 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 praVIDYSkaDAWAVGAIAYEIFGLVNPFYGQGKahLES-----RSYQEAQLPALpESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14114 178 ---VGFYT--DMWAVGVLSYVLLSGLSPFAGEND--DETlrnvkSCDWNFDDSAF-SGISEEAKDFIRKLLLADPNKRMT 249

                ....
gi 14165272 500 ARVA 503
Cdd:cd14114 250 IHQA 253
PKc_PBS2_like cd06622
Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
355-531 5.28e-05

Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. The PBS2 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132953 [Multi-domain]  Cd Length: 286  Bit Score: 45.22  E-value: 5.28e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 355 QQGIAHRDLKSDNILVeldpDGCPWLVIADFGC------CLADESIGLQlpfsswyvdrggngCLMAPEvSTARPGPRAV 428
Cdd:cd06622 121 EHNIIHRDVKPTNVLV----NGNGQVKLCDFGVsgnlvaSLAKTNIGCQ--------------SYMAPE-RIKSGGPNQN 181
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 IDYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHLESR--SYQEAQLPALPESVPPDVRQLVRALLQREASKRPSARVAAn 505
Cdd:cd06622 182 PTYTvQSDVWSLGLSILEMALGRYPYPPETYANIFAQlsAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLL- 260
                       170       180
                ....*....|....*....|....*...
gi 14165272 506 vlhlslwgEH--ILALKNLKLDkMVGWL 531
Cdd:cd06622 261 --------EHpwLVKYKNADVD-MAEWV 279
STKc_CDK7 cd07841
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs ...
271-503 5.55e-05

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270833 [Multi-domain]  Cd Length: 298  Bit Score: 45.26  E-value: 5.55e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTSSVPLlpgALVdyPDVLPSRLhpEGLGHGRTLFLVMKNYPCTLRQYLcvntpsprlaammllqllEGV 350
Cdd:cd07841  61 HPNIIGLLDVFGHKSNI---NLV--FEFMETDL--EKVIKDKSIVLTPADIKSYMLMTL------------------RGL 115
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 351 DHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccLA------DESIGLQLpFSSWYvdRggngclmAPEVSTarpG 424
Cdd:cd07841 116 EYLHSNWILHRDLKPNNLL--IASDGV--LKLADFG--LArsfgspNRKMTHQV-VTRWY--R-------APELLF---G 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 PRAvidYSKA-DAWAVGAIAYEIFgLVNPFYgQGKAHLE--SRSYQ------EAQLP---ALPESV------PPDVRQLV 486
Cdd:cd07841 177 ARH---YGVGvDMWSVGCIFAELL-LRVPFL-PGDSDIDqlGKIFEalgtptEENWPgvtSLPDYVefkpfpPTPLKQIF 251
                       250       260
                ....*....|....*....|....*...
gi 14165272 487 RA-------LLQR----EASKRPSARVA 503
Cdd:cd07841 252 PAasddaldLLQRlltlNPNKRITARQA 279
STKc_PAK3 cd06656
Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine ...
348-501 5.90e-05

Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation.


Pssm-ID: 132987 [Multi-domain]  Cd Length: 297  Bit Score: 45.10  E-value: 5.90e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladesiGLQLPFSSWYVDRGGNGCLMAPEVSTARP-GPr 426
Cdd:cd06656 126 QALDFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFC------AQITPEQSKRSTMVGTPYWMAPEVVTRKAyGP- 194
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 427 avidysKADAWAVGAIAYEIFGLVNPFYGQGKAH----LESRSYQEAQlpaLPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd06656 195 ------KVDIWSLGIMAIEMVEGEPPYLNENPLRalylIATNGTPELQ---NPERLSAVFRDFLNRCLEMDVDRRGSAK 264
STKc_DRAK1 cd14197
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
348-500 6.90e-05

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 (also called STK17A) and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. Rabbit DRAK1 has been shown to induce apoptosis in osteoclasts and overexpressio of human DRAK1 induces apoptosis in cultured fibroblast cells. DRAK1 may be involved in apoptotic signaling. The DRAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271099 [Multi-domain]  Cd Length: 271  Bit Score: 44.93  E-value: 6.90e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDpdgCPW--LVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEVSTARPGP 425
Cdd:cd14197 122 EGVSFLHNNNVVHLDLKPQNILLTSE---SPLgdIKIVDFG-------LSRILKNSEELREIMGTPEYVAPEILSYEPIS 191
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 426 RAvidyskADAWAVGAIAYEIFGLVNPFYGQGKAHL------ESRSYQEAQLPALPESVPpdvrQLVRALLQREASKRPS 499
Cdd:cd14197 192 TA------TDMWSIGVLAYVMLTGISPFLGDDKQETflnisqMNVSYSEEEFEHLSESAI----DFIKTLLIKKPENRAT 261

                .
gi 14165272 500 A 500
Cdd:cd14197 262 A 262
STKc_PIM2 cd14101
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
348-499 7.13e-05

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are three PIM2 isoforms resulting from alternative translation initiation sites. PIM2 is highly expressed in leukemia and lymphomas and has been shown to promote the survival and proliferation of tumor cells. The PIM2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271003 [Multi-domain]  Cd Length: 257  Bit Score: 44.84  E-value: 7.13e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDpDGCPWLVIADFGCCLADESiglqlpfsswYVDRGGNGCLMAPEvstarpgpra 427
Cdd:cd14101 119 EAVQHCHSKGVVHRDIKDENILVDLR-TGDIKLIDFGSGATLKDSM----------YTDFDGTRVYSPPE---------- 177
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 428 VIDYSK-----ADAWAVGAIAYEIFGLVNPFYgQGKAHLESRsyqeaqlPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14101 178 WILYHQyhalpATVWSLGILLYDMVCGDIPFE-RDTDILKAK-------PSFNKRVSNDCRSLIRSCLAYNPSDRPS 246
STKc_GRK4 cd05631
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4; STKs ...
349-497 8.27e-05

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures and is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173720 [Multi-domain]  Cd Length: 285  Bit Score: 44.60  E-value: 8.27e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVeldpDGCPWLVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEVSTARpgprav 428
Cdd:cd05631 114 GLEDLQRERIVYRDLKPENILL----DDRGHIRISDLG-------LAVQIPEGETVRGRVGTVGYMAPEVINNE------ 176
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 429 iDYS-KADAWAVGAIAYEIFGLVNPFygqgKAHLESRSYQEA------QLPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05631 177 -KYTfSPDWWGLGCLIYEMIQGQSPF----RKRKERVKREEVdrrvkeDQEEYSEKFSEDAKSICRMLLTKNPKER 247
STKc_TSSK3-like cd14163
Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs ...
357-499 8.87e-05

Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. Its mRNA levels is low at birth, increases at puberty, and remains high throughout adulthood. The TSSK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271065 [Multi-domain]  Cd Length: 257  Bit Score: 44.60  E-value: 8.87e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVEldpdgcpwlviaDFGCCLADESIGLQLPFSSWYVDRG--GNGCLMAPEVSTARPGpraviDYSKA 434
Cdd:cd14163 121 GVAHRDLKCENALLQ------------GFTLKLTDFGFAKQLPKGGRELSQTfcGSTAYAAPEVLQGVPH-----DSRKG 183
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 435 DAWAVGAIAYEIFGLVNPFygqGKAHLESRSYQEAQLPALPE--SVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14163 184 DIWSMGVVLYVMLCAQLPF---DDTDIPKMLCQQQKGVSLPGhlGVSRTCQDLLKRLLEPDMVLRPS 247
STKc_GAK cd14036
Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs ...
266-507 9.90e-05

Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GAK, also called auxilin-2, contains an N-terminal kinase domain that phosphorylates the mu subunits of adaptor protein (AP) 1 and AP2. In addition, it contains an auxilin-1-like domain structure consisting of PTEN-like, clathrin-binding, and J domains. Like auxilin-1, GAK facilitates Hsc70-mediated dissociation of clathrin from clathrin-coated vesicles. GAK is expressed ubiquitously and is enriched in the Golgi, unlike auxilin-1 which is nerve-specific. GAK also plays regulatory roles outside of clathrin-mediated membrane traffic including the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses through interaction with the interleukin 12 receptor. It also interacts with the androgen receptor, acting as a transcriptional coactivator, and its expression is significantly increased with the progression of prostate cancer. The GAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270938 [Multi-domain]  Cd Length: 282  Bit Score: 44.42  E-value: 9.90e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIIrvlrAFTSSvpllpgalvdypdvlpSRLHPEGLGHGRTLFLVMKNYpCTLRQYLCVNTPSPRLAAMMLL- 344
Cdd:cd14036  52 KKLSGHPNIV----QFCSA----------------ASIGKEESDQGQAEYLLLTEL-CKGQLVDFVKKVEAPGPFSPDTv 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 345 -----QLLEGVDHLVQQG--IAHRDLKSDNILVELDPDgcpwLVIADFGcclaDESIGLQLPFSSWyvdRGGNGCLMAPE 417
Cdd:cd14036 111 lkifyQTCRAVQHMHKQSppIIHRDLKIENLLIGNQGQ----IKLCDFG----SATTEAHYPDYSW---SAQKRSLVEDE 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 418 VST-ARPGPRA--VID-YS------KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYqeaqlpalpeSVPPDVRQ--- 484
Cdd:cd14036 180 ITRnTTPMYRTpeMIDlYSnypigeKQDIWALGCILYLLCFRKHPFEDGAKLRIINAKY----------TIPPNDTQytv 249
                       250       260
                ....*....|....*....|....*.
gi 14165272 485 ---LVRALLQREASKRPSARVAANVL 507
Cdd:cd14036 250 fhdLIRSTLKVNPEERLSITEIVEQL 275
STKc_PAK1 cd06654
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the ...
348-501 1.05e-04

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. PAK1 belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270820 [Multi-domain]  Cd Length: 296  Bit Score: 44.33  E-value: 1.05e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladesiGLQLPFSSWYVDRGGNGCLMAPEVSTARP-GPr 426
Cdd:cd06654 127 QALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFC------AQITPEQSKRSTMVGTPYWMAPEVVTRKAyGP- 195
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 427 avidysKADAWAVGAIAYEIFGLVNPFYGQGKAH----LESRSYQEAQlpaLPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd06654 196 ------KVDIWSLGIMAIEMIEGEPPYLNENPLRalylIATNGTPELQ---NPEKLSAIFRDFLNRCLEMDVEKRGSAK 265
STKc_RSK2_C cd14176
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called ...
252-500 1.09e-04

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called 90kDa ribosomal protein S6 kinase 3 or Ribosomal protein S6 kinase alpha-3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK2 is also called p90RSK3, RPS6KA3, S6K-alpha-3, or MAPK-activated protein kinase 1b (MAPKAPK-1b). RSK2 is expressed highly in the regions of the brain with high synaptic activity. It plays a role in the maintenance and consolidation of excitatory synapses. It is a specific modulator of phospholipase D in calcium-regulated exocytosis. Mutations in the RSK2 gene, RPS6KA3, cause Coffin-Lowry syndrome (CLS), a rare syndromic form of X-linked mental retardation characterized by growth and psychomotor retardation and skeletal abnormalities. RSK2 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271078 [Multi-domain]  Cd Length: 339  Bit Score: 44.63  E-value: 1.09e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 252 EYGAVTYRKSKRGPKQ-------LAPHPNIIRVLRAFTSsvpllpgalvdypdvlpsrlhpeglghGRTLFLV---MKNY 321
Cdd:cd14176  46 EFAVKIIDKSKRDPTEeieillrYGQHPNIITLKDVYDD---------------------------GKYVYVVtelMKGG 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 322 PC---TLRQYLCvntpSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVeLDPDGCPWLV-IADFGccladesIGLQ 397
Cdd:cd14176  99 ELldkILRQKFF----SEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILY-VDESGNPESIrICDFG-------FAKQ 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 398 LpfsswyvdRGGNGCLMAPEVSTARPGPRAVID--YSKA-DAWAVGAIAYEIFGLVNPF--------------YGQGKAH 460
Cdd:cd14176 167 L--------RAENGLLMTPCYTANFVAPEVLERqgYDAAcDIWSLGVLLYTMLTGYTPFangpddtpeeilarIGSGKFS 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 14165272 461 LESRSYQeaqlpalpeSVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14176 239 LSGGYWN---------SVSDTAKDLVSKMLHVDPHQRLTA 269
STKc_MAPKAPK2 cd14170
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
348-497 1.11e-04

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 2 (MAPKAP2 or MK2) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK2 is a bonafide substrate for the MAPK p38. It is closely related to MK3 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. The MK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271072 [Multi-domain]  Cd Length: 303  Bit Score: 44.64  E-value: 1.11e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNIL-VELDPDGCpwLVIADFGccLADESI---GLQLP-FSSWYVdrggngclmAPEVStar 422
Cdd:cd14170 112 EAIQYLHSINIAHRDVKPENLLyTSKRPNAI--LKLTDFG--FAKETTshnSLTTPcYTPYYV---------APEVL--- 175
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 pGPRaviDYSKA-DAWAVGAIAYEIFGLVNPFYGQG--------KAHLESRSYqEAQLPALPEsVPPDVRQLVRALLQRE 493
Cdd:cd14170 176 -GPE---KYDKScDMWSLGVIMYILLCGYPPFYSNHglaispgmKTRIRMGQY-EFPNPEWSE-VSEEVKMLIRNLLKTE 249

                ....
gi 14165272 494 ASKR 497
Cdd:cd14170 250 PTQR 253
STKc_MAP4K4_6_N cd06636
N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase ...
349-446 1.18e-04

N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. The MAP4K4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270806 [Multi-domain]  Cd Length: 282  Bit Score: 44.23  E-value: 1.18e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLA-DESIGLQLPFSswyvdrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd06636 133 GLAHLHAHKVIHRDIKGQNVLLTENAE----VKLVDFGVSAQlDRTVGRRNTFI-------GTPYWMAPEVIACDENPDA 201
                        90
                ....*....|....*....
gi 14165272 428 VIDYsKADAWAVGAIAYEI 446
Cdd:cd06636 202 TYDY-RSDIWSLGITAIEM 219
PKc_TOPK cd14001
Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer ...
358-508 1.19e-04

Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer T-cell-originated protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TOPK, also called PDZ-binding kinase (PBK), is activated at the early stage of mitosis and plays a critical role in cytokinesis. It partly functions as a mitogen-activated protein kinase (MAPK) kinase and is capable of phosphorylating p38, JNK1, and ERK2. TOPK also plays a role in DNA damage sensing and repair through its phosphorylation of histone H2AX. It contributes to cancer development and progression by downregulating the function of tumor suppressor p53 and reducing cell-cycle regulatory proteins. TOPK is found highly expressed in breast and skin cancer cells. The TOPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270903 [Multi-domain]  Cd Length: 292  Bit Score: 44.31  E-value: 1.19e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNILVELDPDGCPwlvIADFGCCLA-DESIGLQLPFSSWYVdrgGNGCLMAPEVSTarpgpRAVIDYSKADA 436
Cdd:cd14001 132 ILHGDIKSGNVLIKGDFESVK---LCDFGVSLPlTENLEVDSDPKAQYV---GTEPWKAKEALE-----EGGVITDKADI 200
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 437 WAVGAIAYEIFGLVNP--FYGQGKAHLESRSYQEAQ------------LPALPESVPPDVRQLVRALL----QREASKRP 498
Cdd:cd14001 201 FAYGLVLWEMMTLSVPhlNLLDIEDDDEDESFDEDEedeeayygtlgtRPALNLGELDDSYQKVIELFyactQEDPKDRP 280
                       170
                ....*....|
gi 14165272 499 SARVAANVLH 508
Cdd:cd14001 281 SAAHIVEALE 290
PK_TRB1 cd14023
Pseudokinase domain of Tribbles Homolog 1; The pseudokinase domain shows similarity to protein ...
434-512 1.22e-04

Pseudokinase domain of Tribbles Homolog 1; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. TRB1 interacts directly with the mitogen activated protein kinase (MAPK) kinase MKK4, an activator of JNK. It regulates vascular smooth muscle cell proliferation and chemotaxis through the JNK signaling pathway. It is found to be down-regulated in human acute myeloid leukaemia (AML) and may play a role in the pathogenesis of the disease. It has also been identified as a potential biomarker for antibody-mediated allograft failure. TRB1 is one of three Tribbles Homolog (TRB) proteins present in vertebrates that are encoded by three separate genes. TRB proteins interact with many proteins involved in signalling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, and gene expression. The TRB1 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270925 [Multi-domain]  Cd Length: 242  Bit Score: 43.88  E-value: 1.22e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 434 ADAWAVGAIAYEIFGLVNPFYGQGKAHLESRsYQEAQLpALPESVPPDVRQLVRALLQREaskrPSARVAANVLHLSLW 512
Cdd:cd14023 169 ADVWSLGVMLYTLLVGRYPFHDSDPSALFSK-IRRGQF-CIPDHVSPKARCLIRSLLRRE----PSERLTAPEILLHPW 241
STKc_MST3 cd06641
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs ...
348-501 1.22e-04

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270809 [Multi-domain]  Cd Length: 277  Bit Score: 44.29  E-value: 1.22e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLADESIGLQLPFSSWYvdrgGNGCLMAPEVSTarpgpRA 427
Cdd:cd06641 112 KGLDYLHSEKKIHRDIKAANVLLSEHGE----VKLADFG--VAGQLTDTQIKRN*FV----GTPFWMAPEVIK-----QS 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 VIDySKADAWAVGAIAYEIFGLVNPfygqgkahlESRSYQEAQLPALPESVPP--------DVRQLVRALLQREASKRPS 499
Cdd:cd06641 177 AYD-SKADIWSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNPPtlegnyskPLKEFVEACLNKEPSFRPT 246

                ..
gi 14165272 500 AR 501
Cdd:cd06641 247 AK 248
STKc_TAO cd06607
Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs ...
348-500 1.29e-04

Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270784 [Multi-domain]  Cd Length: 258  Bit Score: 43.98  E-value: 1.29e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCPWLviADFG----CCLADESIGlqLPFssWyvdrggngclMAPEVSTAR- 422
Cdd:cd06607 112 QGLAYLHSHNRIHRDVKAGNIL--LTEPGTVKL--ADFGsaslVCPANSFVG--TPY--W----------MAPEVILAMd 173
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 PGPravidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAhleSRSYQEAQ--LPALPESVPPDV-RQLVRALLQREASKRP 498
Cdd:cd06607 174 EGQ-----YDgKVDVWSLGITCIELAERKPPLFNMNAM---SALYHIAQndSPTLSSGEWSDDfRNFVDSCLQKIPQDRP 245

                ..
gi 14165272 499 SA 500
Cdd:cd06607 246 SA 247
STKc_B-Raf cd14151
Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) ...
348-510 1.29e-04

Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. B-Raf activates ERK with the strongest magnitude, compared with other Raf kinases. Mice embryos deficient in B-Raf die around midgestation due to vascular hemorrhage caused by apoptotic endothelial cells. Mutations in B-Raf have been implicated in initiating tumorigenesis and tumor progression, and are found in malignant cutaneous melanoma, papillary thyroid cancer, as well as in ovarian and colorectal carcinomas. Most oncogenic B-Raf mutations are located at the activation loop of the kinase and surrounding regions; the V600E mutation accounts for around 90% of oncogenic mutations. The V600E mutant constitutively activates MEK, resulting in sustained activation of ERK. B-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The B-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271053 [Multi-domain]  Cd Length: 274  Bit Score: 43.90  E-value: 1.29e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladeSIGLQLPFSSWYVDRGGNGCLMAPEV---STARPg 424
Cdd:cd14151 115 QGMDYLHAKSIIHRDLKSNNIFLHEDLT----VKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVirmQDKNP- 185
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pravidYS-KADAWAVGAIAYEIFGLVNPFYGQGK----AHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14151 186 ------YSfQSDVYAFGIVLYELMTGQLPYSNINNrdqiIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 259
                       170
                ....*....|..
gi 14165272 500 -ARVAANVLHLS 510
Cdd:cd14151 260 fPQILASIELLA 271
PTKc_FGFR cd05053
Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs ...
266-449 1.32e-04

Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. The FGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 270646 [Multi-domain]  Cd Length: 294  Bit Score: 44.33  E-value: 1.32e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIIRVLRAFTSSVPLLpgALVDYPdvlpsrlhpeglGHGrtlflvmknypcTLRQYLCVNTPSPRLAAMMLLQ 345
Cdd:cd05053  71 KMIGKHKNIINLLGACTQDGPLY--VVVEYA------------SKG------------NLREFLRARRPPGEEASPDDPR 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 346 LLE-----------------GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLADESIGlqlpfsswYVDRG 408
Cdd:cd05053 125 VPEeqltqkdlvsfayqvarGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHID--------YYRKT 192
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 14165272 409 GNGCL----MAPEVSTARpgpravIDYSKADAWAVGAIAYEIFGL 449
Cdd:cd05053 193 TNGRLpvkwMAPEALFDR------VYTHQSDVWSFGVLLWEIFTL 231
PTKc_Ror1 cd05090
Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor ...
349-498 1.39e-04

Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The Ror1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270672 [Multi-domain]  Cd Length: 283  Bit Score: 43.85  E-value: 1.39e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILV--ELDpdgcpwLVIADFGccladesIGLQLPFSSWYvdrggngCLMAPEVSTARPGPR 426
Cdd:cd05090 136 GMEYLSSHFFVHKDLAARNILVgeQLH------VKISDLG-------LSREIYSSDYY-------RVQNKSLLPIRWMPP 195
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 427 AVIDYSK----ADAWAVGAIAYEIFGL-VNPFYGQGKAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRP 498
Cdd:cd05090 196 EAIMYGKfssdSDIWSFGVVLWEIFSFgLQPYYGFSNQEVIEMVRKRQLLPC-SEDCPPRMYSLMTECWQEIPSRRP 271
PHA03209 PHA03209
serine/threonine kinase US3; Provisional
316-446 1.40e-04

serine/threonine kinase US3; Provisional


Pssm-ID: 177557 [Multi-domain]  Cd Length: 357  Bit Score: 44.48  E-value: 1.40e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  316 LVMKNYPCTLRQYLCVN-TPSP-RLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDGCpwlvIADFGCClades 393
Cdd:PHA03209 134 MVLPHYSSDLYTYLTKRsRPLPiDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVC----IGDLGAA----- 204
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 14165272  394 iglQLPFSSwYVDRGgngclMAPEVSTARPGPRAVIDY-SKADAWAVGAIAYEI 446
Cdd:PHA03209 205 ---QFPVVA-PAFLG-----LAGTVETNAPEVLARDKYnSKADIWSAGIVLFEM 249
STKc_MAPK15-like cd07852
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and ...
356-503 1.57e-04

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and similar MAPKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270841 [Multi-domain]  Cd Length: 337  Bit Score: 44.09  E-value: 1.57e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 356 QGIAHRDLKSDNILveLDPDgCpwLV-IADFGC--CLADESIGLQLPF------SSWYvdRggngclmAPEV---STArp 423
Cdd:cd07852 126 GGVIHRDLKPSNIL--LNSD-C--RVkLADFGLarSLSQLEEDDENPVltdyvaTRWY--R-------APEIllgSTR-- 189
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 gpravidYSKA-DAWAVGAIAYEIFG-------------------------------LVNPFygqGKAHLESRSYQEAQ- 470
Cdd:cd07852 190 -------YTKGvDMWSVGCILGEMLLgkplfpgtstlnqlekiievigrpsaediesIQSPF---AATMLESLPPSRPKs 259
                       170       180       190
                ....*....|....*....|....*....|...
gi 14165272 471 LPALPESVPPDVRQLVRALLQREASKRPSARVA 503
Cdd:cd07852 260 LDELFPKASPDALDLLKKLLVFNPNKRLTAEEA 292
STKc_ROCK cd05596
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
350-457 1.62e-04

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270747 [Multi-domain]  Cd Length: 352  Bit Score: 44.29  E-value: 1.62e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGLQLpfSSWYVdrgGNGCLMAPEV--STARPGpra 427
Cdd:cd05596 138 LDAIHSMGFVHRDVKPDNML--LDASG--HLKLADFGTCMKMDKDGLVR--SDTAV---GTPDYISPEVlkSQGGDG--- 205
                        90       100       110
                ....*....|....*....|....*....|.
gi 14165272 428 viDYSK-ADAWAVGAIAYEIFGLVNPFYGQG 457
Cdd:cd05596 206 --VYGReCDWWSVGVFLYEMLVGDTPFYADS 234
PTKc_Tyk2_rpt2 cd05080
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze ...
309-501 1.71e-04

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Tyk2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270664 [Multi-domain]  Cd Length: 283  Bit Score: 43.73  E-value: 1.71e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 309 GHGRTLFLVMKNYPC-TLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLV-IADFG 386
Cdd:cd05080  78 QGGKSLQLIMEYVPLgSLRDYLPKHSIGLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR-----LVkIGDFG 152
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 387 CCLAdesiglqLPFSSWYVDRGGNG----------CLMAPEVSTArpgpravidyskADAWAVGAIAYEIFGLVNPFYGQ 456
Cdd:cd05080 153 LAKA-------VPEGHEYYRVREDGdspvfwyapeCLKEYKFYYA------------SDVWSFGVTLYELLTHCDSSQSP 213
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 457 GKAHLE---SRSYQEAQLPAL-----------PESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd05080 214 PTKFLEmigIAQGQMTVVRLIellergerlpcPDKCPQEVYHLMKNCWETEASFRPTFE 272
STKc_GRK2 cd14223
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 2; STKs ...
349-497 1.76e-04

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK2, also called beta-adrenergic receptor kinase (beta-ARK) or beta-ARK1, is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRK2 contains an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. TheGRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271125 [Multi-domain]  Cd Length: 321  Bit Score: 43.88  E-value: 1.76e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADfgccladesIGLQLPFSSW--YVDRGGNGcLMAPEVSTarpgpR 426
Cdd:cd14223 115 GLEHMHSRFVVYRDLKPANIL--LDEFG--HVRISD---------LGLACDFSKKkpHASVGTHG-YMAPEVLQ-----K 175
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 427 AVIDYSKADAWAVGAIAYEIFGLVNPF-YGQGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14223 176 GVAYDSSADWFSLGCMLFKLLRGHSPFrQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 247
PKc_DYRK_like cd14133
Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like ...
348-505 1.79e-04

Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like protein kinases; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity DYRKs and YAK1, as well as the S/T kinases (STKs), HIPKs. DYRKs and YAK1 autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. Proteins in this subfamily play important roles in cell proliferation, differentiation, survival, growth, and development. The DYRK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271035 [Multi-domain]  Cd Length: 262  Bit Score: 43.41  E-value: 1.79e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVElDPDGCPWLVIaDFG--CCLADE-SIGLQlpfSSWYvdrggngclMAPEVSTArpg 424
Cdd:cd14133 113 EALVFLHSLGLIHCDLKPENILLA-SYSRCQIKII-DFGssCFLTQRlYSYIQ---SRYY---------RAPEVILG--- 175
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pravIDYSKA-DAWAVGAIAYEIFgLVNPFYgQGKAHLESRSYQEAQLPALPESV-------PPDVRQLVRALLQREASK 496
Cdd:cd14133 176 ----LPYDEKiDMWSLGCILAELY-TGEPLF-PGASEVDQLARIIGTIGIPPAHMldqgkadDELFVDFLKKLLEIDPKE 249

                ....*....
gi 14165272 497 RPSARVAAN 505
Cdd:cd14133 250 RPTASQALS 258
STKc_CDKL cd07833
Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs ...
267-447 1.95e-04

Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270827 [Multi-domain]  Cd Length: 288  Bit Score: 43.46  E-value: 1.95e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 267 QLAPHPNIIRVLRAFTSSvpllpgalvdypdvlpsrlhpeglghGRtLFLVMKNYPCTLRQYLCVNtP---SPRLAAMML 343
Cdd:cd07833  55 RQLRHENIVNLKEAFRRK--------------------------GR-LYLVFEYVERTLLELLEAS-PgglPPDAVRSYI 106
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 344 LQLLEGVDHLVQQGIAHRDLKSDNILVelDPDGCpwLVIADFGCCLAdesigLQLPFSSWYVDRGGNGCLMAPEVSTARP 423
Cdd:cd07833 107 WQLLQAIAYCHSHNIIHRDIKPENILV--SESGV--LKLCDFGFARA-----LTARPASPLTDYVATRWYRAPELLVGDT 177
                       170       180
                ....*....|....*....|....*
gi 14165272 424 gpraviDYSKA-DAWAVGAIAYEIF 447
Cdd:cd07833 178 ------NYGKPvDVWAIGCIMAELL 196
PTKc_PDGFR cd05055
Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; ...
267-499 2.08e-04

Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. The PDGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 133186 [Multi-domain]  Cd Length: 302  Bit Score: 43.63  E-value: 2.08e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 267 QLAPHPNIIRVLRAFTSSVPLLP-------GALVDYpdvlpsrlhpegLGHGRTLFLvmknypcTLRQYLCVNTpsprla 339
Cdd:cd05055  94 HLGNHENIVNLLGACTIGGPILViteyccyGDLLNF------------LRRKRESFL-------TLEDLLSFSY------ 148
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 340 ammllQLLEGVDHLVQQGIAHRDLKSDNILVeldpdgCPWLV--IADFGccLADESIGlqlpfSSWYVDRgGNGCL---- 413
Cdd:cd05055 149 -----QVAKGMAFLASKNCIHRDLAARNVLL------THGKIvkICDFG--LARDIMN-----DSNYVVK-GNARLpvkw 209
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 414 MAPEvstarpgprAVID--YS-KADAWAVGAIAYEIFGL-VNPFYG----QGKAHLESRSYQEAQlpalPESVPPDVRQL 485
Cdd:cd05055 210 MAPE---------SIFNcvYTfESDVWSYGILLWEIFSLgSNPYPGmpvdSKFYKLIKEGYRMAQ----PEHAPAEIYDI 276
                       250
                ....*....|....
gi 14165272 486 VRALLQREASKRPS 499
Cdd:cd05055 277 MKTCWDADPLKRPT 290
pknD PRK13184
serine/threonine-protein kinase PknD;
349-453 2.11e-04

serine/threonine-protein kinase PknD;


Pssm-ID: 183880 [Multi-domain]  Cd Length: 932  Bit Score: 44.38  E-value: 2.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLA-----DESIGLQLP-----FSSWYVDRG--GNGCLMAP 416
Cdd:PRK13184 125 TIEYVHSKGVLHRDLKPDNILLGLFGE----VVILDWGAAIFkkleeEDLLDIDVDernicYSSMTIPGKivGTPDYMAP 200
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 14165272  417 EVSTARPGPRavidysKADAWAVGAIAYEIFGLVNPF 453
Cdd:PRK13184 201 ERLLGVPASE------STDIYALGVILYQMLTLSFPY 231
STKc_DRAK2 cd14198
The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
348-500 2.18e-04

The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2 (also called STK17B). Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. DRAK2 has been implicated in inducing or enhancing apoptosis in beta cells, fibroblasts, and lymphoid cells, where it is highly expressed. It is involved in regulating many immune processes including the germinal center (GC) reaction, responses to thymus-dependent antigens, activated T cell survival, memory T cell responses. It may be involved in the development of autoimmunity. The DRAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271100 [Multi-domain]  Cd Length: 270  Bit Score: 43.37  E-value: 2.18e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILV-ELDPDGCpwLVIADFGCCLADESIG--LQLPFSSWYVdrggngclmAPEVSTARPG 424
Cdd:cd14198 121 EGVYYLHQNNIVHLDLKPQNILLsSIYPLGD--IKIVDFGMSRKIGHACelREIMGTPEYL---------APEILNYDPI 189
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 PRAvidyskADAWAVGAIAYEIFGLVNPFYGQGKAHL------ESRSYQEAQLpalpESVPPDVRQLVRALLQREASKRP 498
Cdd:cd14198 190 TTA------TDMWNIGVIAYMLLTHESPFVGEDNQETflnisqVNVDYSEETF----SSVSQLATDFIQKLLVKNPEKRP 259

                ..
gi 14165272 499 SA 500
Cdd:cd14198 260 TA 261
PTKc_Jak3_rpt2 cd05081
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the ...
264-512 2.24e-04

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak3 is expressed only in hematopoietic cells. It binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Jak3 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270665 [Multi-domain]  Cd Length: 283  Bit Score: 43.34  E-value: 2.24e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 264 GPKQLAPHPNIIRVLRAFTSSVpllpgaLVDYPDVLPSRLHPEglghgrtLFLVMKNYPC-TLRQYLCVNTP--SPRLAA 340
Cdd:cd05081  45 GPDQQRDFQREIQILKALHSDF------IVKYRGVSYGPGRRS-------LRLVMEYLPSgCLRDFLQRHRArlDASRLL 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 341 MMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCC----LADESIGLQLPFSS---WYvdrggngcl 413
Cdd:cd05081 112 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH----VKIADFGLAkllpLDKDYYVVREPGQSpifWY--------- 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 414 mAPEVSTARPGPRAvidyskADAWAVGAIAYEIFGLVNpfygqgkahlESRSYQEAQLPAL-PESVPPDVRQLVRALlqr 492
Cdd:cd05081 179 -APESLSDNIFSRQ------SDVWSFGVVLYELFTYCD----------KSCSPSAEFLRMMgCERDVPALCRLLELL--- 238
                       250       260
                ....*....|....*....|....
gi 14165272 493 EASKR----PSARVAANVLHLSLW 512
Cdd:cd05081 239 EEGQRlpapPACPAEVHELMKLCW 262
STKc_PhKG2 cd14181
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs ...
266-503 2.56e-04

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 2 subunit (PhKG2) is also referred to as the testis/liver gamma isoform. Mutations in its gene cause autosomal-recessive glycogenosis of the liver. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271083 [Multi-domain]  Cd Length: 279  Bit Score: 43.04  E-value: 2.56e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIIRVLRAFTSSVPLL-------PGALVDYpdvLPSRLHpeglghgrtlfLVMKNYPCTLRQYLcvntpsprl 338
Cdd:cd14181  70 RQVSGHPSIITLIDSYESSTFIFlvfdlmrRGELFDY---LTEKVT-----------LSEKETRSIMRSLL--------- 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 339 aammllqllEGVDHLVQQGIAHRDLKSDNILVeldpDGCPWLVIADFG--CCLADESIGLQLPFSSWYvdrggngclMAP 416
Cdd:cd14181 127 ---------EAVSYLHANNIVHRDLKPENILL----DDQLHIKLSDFGfsCHLEPGEKLRELCGTPGY---------LAP 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 417 EV-----STARPGpravidYSK-ADAWAVGAIAYEIFGLVNPFYGQgKAHLESRSYQEAQLP-ALPE--SVPPDVRQLVR 487
Cdd:cd14181 185 EIlkcsmDETHPG------YGKeVDLWACGVILFTLLAGSPPFWHR-RQMLMLRMIMEGRYQfSSPEwdDRSSTVKDLIS 257
                       250
                ....*....|....*.
gi 14165272 488 ALLQREASKRPSARVA 503
Cdd:cd14181 258 RLLVVDPEIRLTAEQA 273
STKc_CDC2L1 cd07843
Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze ...
348-446 2.68e-04

Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173741 [Multi-domain]  Cd Length: 293  Bit Score: 43.37  E-value: 2.68e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccLADESIGLQLPFSS-----WYvdRggngclmAPEVSTAR 422
Cdd:cd07843 117 SGVAHLHDNWILHRDLKTSNLL--LNNRGI--LKICDFG--LAREYGSPLKPYTQlvvtlWY--R-------APELLLGA 181
                        90       100
                ....*....|....*....|....*
gi 14165272 423 PgpraviDYSKA-DAWAVGAIAYEI 446
Cdd:cd07843 182 K------EYSTAiDMWSVGCIFAEL 200
STKc_myosinIIIA_N cd06638
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze ...
349-499 2.83e-04

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132969 [Multi-domain]  Cd Length: 286  Bit Score: 43.08  E-value: 2.83e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCPWLViaDFGCCLADESIGLQLPFSSwyvdrgGNGCLMAPEVSTARPGPRAV 428
Cdd:cd06638 136 GLQHLHVNKTIHRDVKGNNIL--LTTEGGVKLV--DFGVSAQLTSTRLRRNTSV------GTPFWMAPEVIACEQQLDST 205
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 IDySKADAWAVGAIAYEIfglvnpfyGQGKAHLESRSYQEAqLPALPESVPPDVRQ----------LVRALLQREASKRP 498
Cdd:cd06638 206 YD-ARCDVWSLGITAIEL--------GDGDPPLADLHPMRA-LFKIPRNPPPTLHQpelwsnefndFIRKCLTKDYEKRP 275

                .
gi 14165272 499 S 499
Cdd:cd06638 276 T 276
STKc_myosinIII_N_like cd06608
N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze ...
349-446 2.93e-04

N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), and mitogen-activated protein kinase (MAPK) kinase kinase kinase 4/6. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270785 [Multi-domain]  Cd Length: 275  Bit Score: 43.06  E-value: 2.93e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCPWLViaDFG-CCLADESIGlqlpfsswyvDRG---GNGCLMAPEVSTARPG 424
Cdd:cd06608 125 GLAYLHENKVIHRDIKGQNIL--LTEEAEVKLV--DFGvSAQLDSTLG----------RRNtfiGTPYWMAPEVIACDQQ 190
                        90       100
                ....*....|....*....|..
gi 14165272 425 PRAVIDySKADAWAVGAIAYEI 446
Cdd:cd06608 191 PDASYD-ARCDVWSLGITAIEL 211
STKc_MAP3K8 cd13995
Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) ...
348-500 3.04e-04

Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K8 is also called Tumor progression locus 2 (Tpl2) or Cancer Osaka thyroid (Cot), and was first identified as a proto-oncogene in T-cell lymphoma induced by MoMuL virus and in breast carcinoma induced by MMTV. Activated MAP3K8 induces various MAPK pathways including Extracellular Regulated Kinase (ERK) 1/2, c-Jun N-terminal kinase (JNK), and p38. It plays a pivotal role in innate immunity, linking Toll-like receptors to the production of TNF and the activation of ERK in macrophages. It is also required in interleukin-1beta production and is critical in host defense against Gram-positive bacteria. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270897 [Multi-domain]  Cd Length: 256  Bit Score: 42.69  E-value: 3.04e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLVIADFGccladesIGLQLPFSSWYV-DRGGNGCLMAPEVSTARPgpr 426
Cdd:cd13995 107 KGLDFLHSKNIIHHDIKPSNIVFMSTK-----AVLVDFG-------LSVQMTEDVYVPkDLRGTEIYMSPEVILCRG--- 171
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 427 aviDYSKADAWAVGAIAYEIFGLVNPFYGQ-GKAHLESRSY----QEAQLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd13995 172 ---HNTKADIYSLGATIIHMQTGSPPWVRRyPRSAYPSYLYiihkQAPPLEDIAQDCSPAMRELLEAALERNPNHRSSA 247
PTKc_Musk cd05050
Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase; PTKs catalyze the ...
349-500 3.15e-04

Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor PTK (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. The Musk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133181 [Multi-domain]  Cd Length: 288  Bit Score: 42.90  E-value: 3.15e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDpdgcpwLV--IADFGCCladesiglQLPFSSWYVDRGGNGCL----MAPEVstar 422
Cdd:cd05050 142 GMAYLSERKFVHRDLATRNCLVGEN------MVvkIADFGLS--------RNIYSADYYKASENDAIpirwMPPES---- 203
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 423 pgpravIDYSK----ADAWAVGAIAYEIFGL-VNPFYGQgkAHLESRSY-QEAQLPALPESVPPDVRQLVRALLQREASK 496
Cdd:cd05050 204 ------IFYNRytteSDVWAYGVVLWEIFSYgMQPYYGM--AHEEVIYYvRDGNVLSCPDNCPLELYNLMRLCWSKLPSD 275

                ....
gi 14165272 497 RPSA 500
Cdd:cd05050 276 RPSF 279
STKc_TGFbR2_like cd14055
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II ...
358-446 3.28e-04

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as TGFbR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. TGFbR2 acts as the receptor for TGFbeta, which is crucial in growth control and homeostasis in many different tissues. It plays roles in regulating apoptosis and in maintaining the balance between self renewal and cell loss. It also plays a key role in maintaining vascular integrity and in regulating responses to genotoxic stress. Mutations in TGFbR2 can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. The TGFbR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270957 [Multi-domain]  Cd Length: 295  Bit Score: 42.75  E-value: 3.28e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNILVELDPDgcpwlviadfgCCLADESIGLQL-PFSSwyVDRGGNGC------LMAPEVSTARPGPRAVID 430
Cdd:cd14055 128 IAHRDLKSSNILVKNDGT-----------CVLADFGLALRLdPSLS--VDELANSGqvgtarYMAPEALESRVNLEDLES 194
                        90
                ....*....|....*.
gi 14165272 431 YSKADAWAVGAIAYEI 446
Cdd:cd14055 195 FKQIDVYSMALVLWEM 210
STKc_Kalirin_C cd14115
C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide ...
348-500 3.29e-04

C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide Exchange Factor, Kalirin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Kalirin, also called Duo or Duet, is a large multidomain protein containing a series of spectrin-like repeats, two each of RhoGEF and SH3 domains, an immunoglobulin-like (Ig) domain and a C-terminal kinase. As a GEF, it activates Rac1, RhoA, and RhoG. It is highly expressed in neurons and is required for spine formation. The kalirin gene produces at least 10 isoforms from alternative promoter use and splicing. Of the major isoforms (Kalirin-7, -9, and -12), only kalirin-12 contains the C-terminal kinase domain. Kalirin-12 is highly expressed during embryonic development and it plays an important role in axon outgrowth. The Kalirin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271017 [Multi-domain]  Cd Length: 248  Bit Score: 42.64  E-value: 3.29e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgCPWLVIADFGccladESIGLQLPFSSWYVDrgGNGCLMAPEVSTARPGPRA 427
Cdd:cd14115 100 EALQYLHNCRVAHLDIKPENLLIDLRIP-VPRVKLIDLE-----DAVQISGHRHVHHLL--GNPEFAAPEVIQGTPVSLA 171
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 vidyskADAWAVGAIAYEIFGLVNPFYGqgkahlESRSYQEAQLPALPESVPPD--------VRQLVRALLQREASKRPS 499
Cdd:cd14115 172 ------TDIWSIGVLTYVMLSGVSPFLD------ESKEETCINVCRVDFSFPDEyfgdvsqaARDFINVILQEDPRRRPT 239

                .
gi 14165272 500 A 500
Cdd:cd14115 240 A 240
STKc_DCKL1 cd14183
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called ...
349-500 3.36e-04

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL1 (or DCAMKL1) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL1 contains a serine, threonine, and proline rich domain (SP) and a C-terminal kinase domain with similarity to CAMKs. DCKL1 interacts with tubulin, glucocorticoid receptor, dynein, JIP1/2, caspases (3 and 8), and calpain, among others. It plays roles in neurogenesis, neuronal migration, retrograde transport, and neuronal apoptosis. The DCKL1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271085 [Multi-domain]  Cd Length: 268  Bit Score: 42.67  E-value: 3.36e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGCCLADESIGLQLPFSSWYVdrggngclmAPEVsTARPGprav 428
Cdd:cd14183 116 AIKYLHSLNIVHRDIKPENLLVYEHQDGSKSLKLGDFGLATVVDGPLYTVCGTPTYV---------APEI-IAETG---- 181
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 429 idYS-KADAWAVGAIAYEIFGLVNPFYGQG---KAHLESRSYQEAQLPaLP--ESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14183 182 --YGlKVDIWAAGVITYILLCGFPPFRGSGddqEVLFDQILMGQVDFP-SPywDNVSDSAKELITMMLQVDVDQRYSA 256
PTKc_Jak2_rpt2 cd14205
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the ...
312-501 3.59e-04

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 is widely expressed in many tissues and is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271107 [Multi-domain]  Cd Length: 284  Bit Score: 42.70  E-value: 3.59e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 312 RTLFLVMKNYPC-TLRQYLCVNTP--SPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCC 388
Cdd:cd14205  80 RNLRLIMEYLPYgSLRDYLQKHKEriDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR----VKIGDFGLT 155
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 389 LA----DESIGLQLPFSS---WYvdrggngclmAPEVSTARPGPRAvidyskADAWAVGAIAYEIFGLVNP--------- 452
Cdd:cd14205 156 KVlpqdKEYYKVKEPGESpifWY----------APESLTESKFSVA------SDVWSFGVVLYELFTYIEKsksppaefm 219
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 453 -FYGQGKA------HLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd14205 220 rMIGNDKQgqmivfHLIELLKNNGRLPR-PDGCPDEIYMIMTECWNNNVNQRPSFR 274
STKc_SIK cd14071
Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the ...
350-497 3.61e-04

Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SIKs are part of a complex network that regulates Na,K-ATPase to maintain sodium homeostasis and blood pressure. Vertebrates contain three forms of SIKs (SIK1-3) from three distinct genes, which display tissue-specific effects. SIK1, also called SNF1LK, controls steroidogenic enzyme production in adrenocortical cells. In the brain, both SIK1 and SIK2 regulate energy metabolism. SIK2, also called QIK or SNF1LK2, is involved in the regulation of gluconeogenesis in the liver and lipogenesis in adipose tissues, where it phosphorylates the insulin receptor substrate-1. In the liver, SIK3 (also called QSK) regulates cholesterol and bile acid metabolism. In addition, SIK2 plays an important role in the initiation of mitosis and regulates the localization of C-Nap1, a centrosome linker protein. The SIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270973 [Multi-domain]  Cd Length: 253  Bit Score: 42.38  E-value: 3.61e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccladesiglqlpFSSWYVDRG------GNGCLMAPEVSTARP 423
Cdd:cd14071 112 VEYCHKRHIVHRDLKAENLLLDANMN----IKIADFG-------------FSNFFKPGEllktwcGSPPYAAPEVFEGKE 174
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 424 --GPravidysKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYqeAQLPALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14071 175 yeGP-------QLDIWSLGVVLYVLVCGALPFDGSTLQTLRDRVL--SGRFRIPFFMSTDCEHLIRRMLVLDPSKR 241
STKc_EIF2AK1_HRI cd14049
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
348-500 3.61e-04

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Heme-Regulated Inhibitor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HRI (or EIF2AK1) contains an N-terminal regulatory heme-binding domain and a C-terminal catalytic kinase domain. It is suppressed under normal conditions by binding of the heme iron, and is activated during heme deficiency. It functions as a critical regulator that ensures balanced synthesis of globins and heme, in order to form stable hemoglobin during erythroid differentiation and maturation. HRI also protects cells and enhances survival under iron-deficient conditions. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The HRI subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270951 [Multi-domain]  Cd Length: 284  Bit Score: 42.88  E-value: 3.61e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELdPDgcPWLVIADFG-CC---LADESIGLQLPFSSWYVDRGGNG-CLMA-PEVSTA 421
Cdd:cd14049 131 EGVTYIHSMGIVHRDLKPRNIFLHG-SD--IHVRIGDFGlACpdiLQDGNDSTTMSRLNGLTHTSGVGtCLYAaPEQLEG 207
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 422 RpgpraviDY-SKADAWAVGAIAYEIFglvNPFYGQGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14049 208 S-------HYdFKSDMYSIGVILLELF---QPFGTEMERAEVLTQLRNGQIPKSLCKRWPVQAKYIKLLTSTEPSERPSA 277
PTKc_FGFR3 cd05100
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs ...
266-501 3.70e-04

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. FGFR3 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173652 [Multi-domain]  Cd Length: 334  Bit Score: 43.09  E-value: 3.70e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIIRVLRAFTSSVPLLpgALVDYP------DVLPSRlHPEGLGHGRTlflvmknyPCTLRQylcvNTPSPRLA 339
Cdd:cd05100  72 KMIGKHKNIINLLGACTQDGPLY--VLVEYAskgnlrEYLRAR-RPPGMDYSFD--------TCKLPE----EQLTFKDL 136
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 340 AMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDpdgcPWLVIADFGccLADESIGLQlpfsswYVDRGGNGCL----MA 415
Cdd:cd05100 137 VSCAYQVARGMEYLASQKCIHRDLAARNVLVTED----NVMKIADFG--LARDVHNID------YYKKTTNGRLpvkwMA 204
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 416 PEVSTARpgpravIDYSKADAWAVGAIAYEIFGL-VNPFYGQGKAHLeSRSYQEAQLPALPESVPPDVRQLVRALLQREA 494
Cdd:cd05100 205 PEALFDR------VYTHQSDVWSFGVLLWEIFTLgGSPYPGIPVEEL-FKLLKEGHRMDKPANCTHELYMIMRECWHAVP 277

                ....*..
gi 14165272 495 SKRPSAR 501
Cdd:cd05100 278 SQRPTFK 284
PTKc_Jak1_rpt2 cd05079
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the ...
251-499 3.82e-04

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Jak1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173644 [Multi-domain]  Cd Length: 284  Bit Score: 42.61  E-value: 3.82e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 251 GEYGAVTYRKSKRGPKQLAPHPNIIRVLRAftssvpLLPGALVDYPDVLPSrlhpeglGHGRTLFLVMKNYPC-TLRQYL 329
Cdd:cd05079  33 GEQVAVKSLKPESGGNHIADLKKEIEILRN------LYHENIVKYKGICTE-------DGGNGIKLIMEFLPSgSLKEYL 99
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 330 --CVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLA----DESIGLQLPFSS- 402
Cdd:cd05079 100 prNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ----VKIGDFGLTKAietdKEYYTVKDDLDSp 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 403 --WYVDRggngCLMAPEVstarpgpravidYSKADAWAVGAIAYEI--------------FGLVNPFYGQGKAHLESRSY 466
Cdd:cd05079 176 vfWYAPE----CLIQSKF------------YIASDVWSFGVTLYELltycdsesspmtlfLKMIGPTHGQMTVTRLVRVL 239
                       250       260       270
                ....*....|....*....|....*....|...
gi 14165272 467 QEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd05079 240 EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT 272
STKc_ACVR2 cd14053
Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the ...
358-418 3.98e-04

Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as ACVR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. Vertebrates contain two ACVR2 proteins, ACVR2a (or ActRIIA) and ACVR2b (or ActRIIB). The ACVR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270955 [Multi-domain]  Cd Length: 290  Bit Score: 42.70  E-value: 3.98e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 358 IAHRDLKSDNILVELDPDGCpwlvIADFGCCL---ADESIGLQLpfsswyvDRGGNGCLMAPEV 418
Cdd:cd14053 123 IAHRDFKSKNVLLKSDLTAC----IADFGLALkfePGKSCGDTH-------GQVGTRRYMAPEV 175
PKc_Pek1_like cd06621
Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
349-501 4.47e-04

Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates Pmk1/Spm1 and is regulated by the MAPKK kinase Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKK kinase Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270793 [Multi-domain]  Cd Length: 287  Bit Score: 42.41  E-value: 4.47e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDG----CPWLVIADFGCCLADESIGlqlpfSSWYvdrggngclMAPEVSTARPg 424
Cdd:cd06621 117 GLSYLHSRKIIHRDIKPSNIL--LTRKGqvklCDFGVSGELVNSLAGTFTG-----TSYY---------MAPERIQGGP- 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 pravidYS-KADAWAVGAIAYEIFGLVNPFYGQGKAHL---ESRSY-QEAQLPALPESVPPDV------RQLVRALLQRE 493
Cdd:cd06621 180 ------YSiTSDVWSLGLTLLEVAQNRFPFPPEGEPPLgpiELLSYiVNMPNPELKDEPENGIkwsesfKDFIEKCLEKD 253

                ....*...
gi 14165272 494 ASKRPSAR 501
Cdd:cd06621 254 GTRRPGPW 261
STKc_ERK5 cd07855
Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; ...
357-516 4.73e-04

Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ERK5 (also called Big MAPK1 (BMK1) or MAPK7) has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. MAPKs are important mediators of cellular responses to extracellular signals. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270842 [Multi-domain]  Cd Length: 336  Bit Score: 42.74  E-value: 4.73e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVELDpdgCPwLVIADFGC--CLADESIGLQLPFSS-----WYvdrggngclMAPEVSTARPgpravi 429
Cdd:cd07855 129 NVIHRDLKPSNLLVNEN---CE-LKIGDFGMarGLCTSPEEHKYFMTEyvatrWY---------RAPELMLSLP------ 189
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 430 DYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAH----------------LES------RSYQE--AQLPALP-ESVPPDVR 483
Cdd:cd07855 190 EYTQAiDMWSVGCIFAEMLGRRQLFPGKNYVHqlqliltvlgtpsqavINAigadrvRRYIQnlPNKQPVPwETLYPKAD 269
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 14165272 484 Q----LVRALLQREASKRPSarVAANVLHLSLWGEHI 516
Cdd:cd07855 270 QqaldLLSQMLRFDPSERIT--VAEALQHPFLAKYHD 304
STKc_BMPR1b cd14219
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IB; STKs ...
306-446 4.87e-04

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IB; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1b, also called Activin receptor-Like Kinase 6 (ALK6), functions as a receptor for bone morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Mutations in BMPR1b that led to inhibition of chondrogenesis can cause Brachydactyly (BD) type A2, a dominant hand malformation characterized by shortening and lateral deviation of the index fingers. A point mutation in the BMPR1b kinase domain is also associated with the Booroola phenotype, characterized by precocious differentiation of ovarian follicles. BMPR1b belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1b, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1b subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271121 [Multi-domain]  Cd Length: 305  Bit Score: 42.34  E-value: 4.87e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 306 EGLGHGRTLFLVMKNYP-CTLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQ--------GIAHRDLKSDNILVEldpdg 376
Cdd:cd14219  70 KGTGSWTQLYLITDYHEnGSLYDYLKSTTLDTKAMLKLAYSSVSGLCHLHTEifstqgkpAIAHRDLKSKNILVK----- 144
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 377 cpwlviADFGCCLADESIGLQLPFSSWYVD-----RGGNGCLMAPEVSTARPGPRAVIDYSKADAWAVGAIAYEI 446
Cdd:cd14219 145 ------KNGTCCIADLGLAVKFISDTNEVDippntRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 213
PTKc_Trk cd05049
Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases; PTKs catalyze ...
349-497 4.95e-04

Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. The Trk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270643 [Multi-domain]  Cd Length: 280  Bit Score: 42.45  E-value: 4.95e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVeldpdGCPWLV-IADFGcclADESIglqlpFSSWYVDRGGNGCL----MAPEVstarp 423
Cdd:cd05049 134 GMVYLASQHFVHRDLATRNCLV-----GTNLVVkIGDFG---MSRDI-----YSTDYYRVGGHTMLpirwMPPES----- 195
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 gpravIDYSK----ADAWAVGAIAYEIFGL-VNPFYGQGKA----HLESRSYQEAqlpalPESVPPDVRQLVRALLQREA 494
Cdd:cd05049 196 -----ILYRKftteSDVWSFGVVLWEIFTYgKQPWFQLSNTevieCITQGRLLQR-----PRTCPSEVYAVMLGCWKREP 265

                ...
gi 14165272 495 SKR 497
Cdd:cd05049 266 QQR 268
STKc_MLK1 cd14145
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the ...
349-499 4.96e-04

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK1 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K9. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Little is known about the specific function of MLK1. It is capable of activating the c-Jun N-terminal kinase pathway. Mice lacking both MLK1 and MLK2 are viable, fertile, and have normal life spans. There could be redundancy in the function of MLKs. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271047 [Multi-domain]  Cd Length: 270  Bit Score: 42.34  E-value: 4.96e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIA---HRDLKSDNIL----VELDPDGCPWLVIADFGccLADEsiglqlpfssWY----VDRGGNGCLMAPE 417
Cdd:cd14145 116 GMNYLHCEAIVpviHRDLKSSNILilekVENGDLSNKILKITDFG--LARE----------WHrttkMSAAGTYAWMAPE 183
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 418 VStarpgpRAVIDYSKADAWAVGAIAYEIFGLVNPFYG-QGKAHLESRSYQEAQLPaLPESVPPDVRQLVRALLQREASK 496
Cdd:cd14145 184 VI------RSSMFSKGSDVWSYGVLLWELLTGEVPFRGiDGLAVAYGVAMNKLSLP-IPSTCPEPFARLMEDCWNPDPHS 256

                ...
gi 14165272 497 RPS 499
Cdd:cd14145 257 RPP 259
PTKc_FAK cd05056
Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase; PTKs catalyze the ...
360-498 5.20e-04

Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) PTK that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. The FAK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133187 [Multi-domain]  Cd Length: 270  Bit Score: 42.02  E-value: 5.20e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 360 HRDLKSDNILVElDPDgCPWLviADFGCC--LADE-----SIGlQLPFSsWyvdrggngclMAPEVstarpgpravIDY- 431
Cdd:cd05056 130 HRDIAARNVLVS-SPD-CVKL--GDFGLSryMEDEsyykaSKG-KLPIK-W----------MAPES----------INFr 183
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 432 ---SKADAWAVGAIAYEIFGL-VNPFYGQGKAHLESRSYQEAQLPaLPESVPPDVRQLVRALLQREASKRP 498
Cdd:cd05056 184 rftSASDVWMFGVCMWEILMLgVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSKRP 253
STKc_STK25 cd06642
Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); ...
348-501 5.69e-04

Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). It is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may be involved in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270810 [Multi-domain]  Cd Length: 277  Bit Score: 41.97  E-value: 5.69e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLADESIGLQLPFSSWYvdrgGNGCLMAPEVSTarpgpRA 427
Cdd:cd06642 112 KGLDYLHSERKIHRDIKAANVLLSEQGD----VKLADFG--VAGQLTDTQIKRNTFV----GTPFWMAPEVIK-----QS 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 VIDYsKADAWAVGAIAYEIFGLVNPFygqgkahleSRSYQEAQLPALPESVPPDV--------RQLVRALLQREASKRPS 499
Cdd:cd06642 177 AYDF-KADIWSLGITAIELAKGEPPN---------SDLHPMRVLFLIPKNSPPTLegqhskpfKEFVEACLNKDPRFRPT 246

                ..
gi 14165272 500 AR 501
Cdd:cd06642 247 AK 248
STKc_EIF2AK2_PKR cd14047
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
259-500 5.89e-04

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Protein Kinase regulated by RNA; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKR (or EIF2AK2) contains an N-terminal double-stranded RNA (dsRNA) binding domain and a C-terminal catalytic kinase domain. It is activated by dsRNA, which is produced as a replication intermediate in virally infected cells. It plays a key role in mediating innate immune responses to viral infection. PKR is also directly activated by PACT (protein activator of PKR) and heparin, and is inhibited by viral proteins and RNAs. PKR also regulates transcription and signal transduction in diseased cells, playing roles in tumorigenesis and neurodegenerative diseases. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PKR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270949 [Multi-domain]  Cd Length: 267  Bit Score: 42.09  E-value: 5.89e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 259 RKSKRGPKQLA--PHPNIIRVLRAFTSSvpllpgalvDYpDVLPSRLHPEGLgHGRTLFLVMKNypC---TLRQYLCVNT 333
Cdd:cd14047  44 EKAEREVKALAklDHPNIVRYNGCWDGF---------DY-DPETSSSNSSRS-KTKCLFIQMEF--CekgTLESWIEKRN 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 334 PSPRLAAMML---LQLLEGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladESIGLQLPFSSwyvdRGGN 410
Cdd:cd14047 111 GEKLDKVLALeifEQITKGVEYIHSKKLIHRDLKPSNIFLVDTGK----VKIGDFGLV---TSLKNDGKRTK----SKGT 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 411 GCLMAPEVSTARpgpraviDY-SKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSyqeAQLPALPESVPPDVRQLVRAL 489
Cdd:cd14047 180 LSYMSPEQISSQ-------DYgKEVDIYALGLILFELLHVCDSAFEKSKFWTDLRN---GILPDIFDKRYKIEKTIIKKM 249
                       250
                ....*....|.
gi 14165272 490 LQREASKRPSA 500
Cdd:cd14047 250 LSKKPEDRPNA 260
STKc_PLK2 cd14188
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the ...
349-499 5.93e-04

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK2, also called Snk (serum-inducible kinase), functions in G1 progression, S-phase arrest, and centriole duplication. Its gene is responsive to both growth factors and cellular stress, is a transcriptional target of p53, and activates a G2-M checkpoint. The PLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271090 [Multi-domain]  Cd Length: 255  Bit Score: 41.92  E-value: 5.93e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLADESIGLQ------LP--FSSWYVDRGGNGClmapevst 420
Cdd:cd14188 113 GLKYLHEQEILHRDLKLGNFFINENME----LKVGDFGLAARLEPLEHRrrticgTPnyLSPEVLNKQGHGC-------- 180
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 421 arpgpravidysKADAWAVGAIAYEIFgLVNPFYGQGKAHLESRSYQEAQLpALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14188 181 ------------ESDIWALGCVMYTML-LGRPPFETTNLKETYRCIREARY-SLPSSLLAPAKHLIASMLSKNPEDRPS 245
STKc_MARK cd14072
Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; ...
350-464 5.99e-04

Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MARKs, also called Partitioning-defective 1 (Par1) proteins, function as regulators of diverse cellular processes in nematodes, Drosophila, yeast, and vertebrates. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. Vertebrates contain four isoforms, namely MARK1 (or Par1c), MARK2 (or Par1b), MARK3 (Par1a), and MARK4 (or MARKL1). Known substrates of MARKs include the cell cycle-regulating phosphatase Cdc25, tyrosine phosphatase PTPH1, MAPK scaffolding protein KSR1, class IIa histone deacetylases, and plakophilin 2. The MARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270974 [Multi-domain]  Cd Length: 253  Bit Score: 41.74  E-value: 5.99e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLADE-SIGLQL-PFSswyvdrgGNGCLMAPEVSTARP--GP 425
Cdd:cd14072 112 VQYCHQKRIVHRDLKAENLLLDADMN----IKIADFG--FSNEfTPGNKLdTFC-------GSPPYAAPELFQGKKydGP 178
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 14165272 426 ravidysKADAWAVGAIAYEIFGLVNPFYGQGKAHLESR 464
Cdd:cd14072 179 -------EVDVWSLGVILYTLVSGSLPFDGQNLKELRER 210
STKc_PKD cd14082
Catalytic domain of the Serine/Threonine kinase, Protein Kinase D; STKs catalyze the transfer ...
352-500 6.28e-04

Catalytic domain of the Serine/Threonine kinase, Protein Kinase D; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKDs are important regulators of many intracellular signaling pathways such as ERK and JNK, and cellular processes including the organization of the trans-Golgi network, membrane trafficking, cell proliferation, migration, and apoptosis. They contain N-terminal cysteine-rich zinc binding C1 (PKC conserved region 1), central PH (Pleckstrin Homology), and C-terminal catalytic kinase domains. Mammals harbor three types of PKDs: PKD1 (or PKCmu), PKD2, and PKD3 (or PKCnu). PKDs are activated in a PKC-dependent manner by many agents including diacylglycerol (DAG), PDGF, neuropeptides, oxidative stress, and tumor-promoting phorbol esters, among others. The PKD subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270984 [Multi-domain]  Cd Length: 260  Bit Score: 42.01  E-value: 6.28e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 352 HLVQQGIAHRDLKSDNILVeLDPDGCPWLVIADFGCCladESIGlQLPFSSWYVdrgGNGCLMAPEVSTARPGPRAVidy 431
Cdd:cd14082 118 YLHSKNIVHCDLKPENVLL-ASAEPFPQVKLCDFGFA---RIIG-EKSFRRSVV---GTPAYLAPEVLRNKGYNRSL--- 186
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 432 skaDAWAVGAIAYEIFGLVNPFYGQGKAH--LESRSYqeaQLPALPES-VPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14082 187 ---DMWSVGVIIYVSLSGTFPFNEDEDINdqIQNAAF---MYPPNPWKeISPDAIDLINNLLQVKMRKRYSV 252
STKc_ROCK1 cd05622
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
349-490 6.44e-04

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. The ROCK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270772 [Multi-domain]  Cd Length: 405  Bit Score: 42.30  E-value: 6.44e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGLQLPFSSWyvdrgGNGCLMAPEVSTARPGPRAv 428
Cdd:cd05622 184 ALDAIHSMGFIHRDVKPDNML--LDKSG--HLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEVLKSQGGDGY- 253
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 429 idYSK-ADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPE--SVPPDVRQLVRALL 490
Cdd:cd05622 254 --YGReCDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDdnDISKEAKNLICAFL 316
STKc_ROCK2 cd05621
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
349-455 6.59e-04

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. The ROCK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270771 [Multi-domain]  Cd Length: 379  Bit Score: 42.29  E-value: 6.59e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADESIGLQlpfsswYVDRG-GNGCLMAPEVSTARPGPRA 427
Cdd:cd05621 163 ALDAIHSMGLIHRDVKPDNML--LDKYG--HLKLADFGTCMKMDETGMV------HCDTAvGTPDYISPEVLKSQGGDGY 232
                        90       100
                ....*....|....*....|....*....
gi 14165272 428 vidYSK-ADAWAVGAIAYEIFGLVNPFYG 455
Cdd:cd05621 233 ---YGReCDWWSVGVFLFEMLVGDTPFYA 258
STKc_PAK4 cd06657
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the ...
353-500 6.69e-04

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. PAK4 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132988 [Multi-domain]  Cd Length: 292  Bit Score: 41.93  E-value: 6.69e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 353 LVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCladESIGLQLPFSSWYVdrgGNGCLMAPEVSTARP-GPravidy 431
Cdd:cd06657 132 LHAQGVIHRDIKSDSILLTHDGR----VKLSDFGFC---AQVSKEVPRRKSLV---GTPYWMAPELISRLPyGP------ 195
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14165272 432 sKADAWAVGAIAYEIFGLVNPFYGQG--KAHLESRSYQEAQLPALpESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd06657 196 -EVDIWSLGIMVIEMVDGEPPYFNEPplKAMKMIRDNLPPKLKNL-HKVSPSLKGFLDRLLVRDPAQRATA 264
STKc_Sck1_like cd05586
Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine ...
350-500 7.04e-04

Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Sck1 and similar fungal proteins. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270738 [Multi-domain]  Cd Length: 330  Bit Score: 42.17  E-value: 7.04e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCCLADesiglqLPFSSWYVDRGGNGCLMAPEVSTARPGpravi 429
Cdd:cd05586 109 LEHLHKNDIVYRDLKPENIL--LDANG--HIALCDFGLSKAD------LTDNKTTNTFCGTTEYLAPEVLLDEKG----- 173
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 430 dYSK-ADAWAVGAIAYEIFGLVNPFYGQGKAHLESR-SYQEAQLPAlpESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd05586 174 -YTKmVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNiAFGKVRFPK--DVLSDEGRSFVKGLLNRNPKHRLGA 243
STKc_BMPR1a cd14220
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IA Receptor; ...
357-446 7.35e-04

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IA Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1a, also called Activin receptor-Like Kinase 3 (ALK3), functions as a receptor for bone morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Germline mutations in BMPR1a are associated with an increased risk to Juvenile Polyposis Syndrome, a hamartomatous disorder that may lead to gastrointestinal cancer. BMPR1a may also play an indirect role in the development of hematopoietic stem cells (HSCs) as osteoblasts are a major component of the HSC niche within the bone marrow. BMPR1a belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1a, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1a subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271122 [Multi-domain]  Cd Length: 287  Bit Score: 41.95  E-value: 7.35e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVEldpdgcpwlviADFGCCLADesIGLQLPFSS--WYVD-----RGGNGCLMAPEVSTARPGPRAVI 429
Cdd:cd14220 120 AIAHRDLKSKNILIK-----------KNGTCCIAD--LGLAVKFNSdtNEVDvplntRVGTKRYMAPEVLDESLNKNHFQ 186
                        90
                ....*....|....*..
gi 14165272 430 DYSKADAWAVGAIAYEI 446
Cdd:cd14220 187 AYIMADIYSFGLIIWEM 203
STKc_RIP cd13978
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze ...
352-501 7.49e-04

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP kinases serve as essential sensors of cellular stress. They are involved in regulating NF-kappaB and MAPK signaling, and are implicated in mediating cellular processes such as apoptosis, necroptosis, differentiation, and survival. RIP kinases contain a homologous N-terminal kinase domain and varying C-terminal domains. Higher vertebrates contain multiple RIP kinases, with mammals harboring at least five members. RIP1 and RIP2 harbor C-terminal domains from the Death domain (DD) superfamily while RIP4 contains ankyrin (ANK) repeats. RIP3 contain a RIP homotypic interaction motif (RHIM) that facilitates binding to RIP1. RIP1 and RIP3 are important in apoptosis and necroptosis, while RIP2 and RIP4 play roles in keratinocyte differentiation and inflammatory immune responses. The RIP subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270880 [Multi-domain]  Cd Length: 263  Bit Score: 41.67  E-value: 7.49e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 352 HLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLAdeSIGLQLPFSSWYVDRGGNG---CLMAPEV---STARPGp 425
Cdd:cd13978 110 HNMDPPLLHHDLKPENILLDNHFH----VKISDFG--LS--KLGMKSISANRRRGTENLGgtpIYMAPEAfddFNKKPT- 180
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 426 ravidySKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPE----SVPPDVRQLVRaLLQREASKRPSAR 501
Cdd:cd13978 181 ------SKSDVYSFAIVIWAVLTRKEPFENAINPLLIMQIVSKGDRPSLDDigrlKQIENVQELIS-LMIRCWDGNPDAR 253
STKc_TSSK4-like cd14162
Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs ...
348-500 8.11e-04

Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. It phosphorylates Cre-Responsive Element Binding protein (CREB), facilitating the binding of CREB to the specific cis cAMP responsive element (CRE), which is important in activating genes related to germ cell differentiation. Mutations in the human TSSK4 gene is associated with infertile Chinese men with impaired spermatogenesis. The TSSK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271064 [Multi-domain]  Cd Length: 259  Bit Score: 41.51  E-value: 8.11e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFG-CCLADESIGLQLPFSSWYVdrgGNGCLMAPEVSTARPgpr 426
Cdd:cd14162 111 AGVEYCHSKGVVHRDLKCENLL--LDKNNN--LKITDFGfARGVMKTKDGKPKLSETYC---GSYAYASPEILRGIP--- 180
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 427 avIDYSKADAWAVGAIAYE-IFGLVnPFYGQGKAHLESRSYQEAQLPALPeSVPPDVRQLVRALLqREASKRPSA 500
Cdd:cd14162 181 --YDPFLSDIWSMGVVLYTmVYGRL-PFDDSNLKVLLKQVQRRVVFPKNP-TVSEECKDLILRML-SPVKKRITI 250
PTKc_InsR_like cd05032
Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer ...
349-499 8.17e-04

Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. InsR and IGF-1R are receptor PTKs (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. The InsR-like subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173625 [Multi-domain]  Cd Length: 277  Bit Score: 41.56  E-value: 8.17e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLAdesiglQLPFSSWYVDRGGNGCL----MAPEvsTARPG 424
Cdd:cd05032 131 GMAYLAAKKFVHRDLAARNCMVAEDLT----VKIGDFG--MT------RDIYETDYYRKGGKGLLpvrwMAPE--SLKDG 196
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 425 praVIDySKADAWAVGAIAYEIFGLVNPFYgQGKAHLESRSY-QEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd05032 197 ---VFT-TKSDVWSFGVVLWEMATLAEQPY-QGLSNEEVLKFvIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPT 267
STKc_GRK3 cd05633
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3; STKs ...
349-497 8.45e-04

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK3, also called beta-adrenergic receptor kinase 2 (beta-ARK2), is widely expressed in many tissues. It is involved in modulating the cholinergic response of airway smooth muscles, and also plays a role in dopamine receptor regulation. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 promoter polymorphisms may also be associated with bipolar disorder. GRK3 contains an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270781 [Multi-domain]  Cd Length: 346  Bit Score: 41.97  E-value: 8.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCPWLVIADFGCCLADESiglqlPFSSWyvdrgGNGCLMAPEVSTarpgpRAV 428
Cdd:cd05633 120 GLEHMHNRFVVYRDLKPANIL--LDEHGHVRISDLGLACDFSKKK-----PHASV-----GTHGYMAPEVLQ-----KGT 182
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 429 IDYSKADAWAVGAIAYEIFGLVNPFygqgKAHLESRSYQEAQLP-----ALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd05633 183 AYDSSADWFSLGCMLFKLLRGHSPF----RQHKTKDKHEIDRMTltvnvELPDSFSPELKSLLEGLLQRDVSKR 252
STKc_CDK6 cd07862
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs ...
348-525 8.54e-04

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270846 [Multi-domain]  Cd Length: 290  Bit Score: 41.56  E-value: 8.54e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLAdESIGLQLPFSS-----WYvdrggngclMAPEV---- 418
Cdd:cd07862 121 RGLDFLHSHRVVHRDLKPQNILVTSSGQ----IKLADFG--LA-RIYSFQMALTSvvvtlWY---------RAPEVllqs 184
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 419 STARPgpravidyskADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPAlPESVPPDVrqlvrALLQREASKRP 498
Cdd:cd07862 185 SYATP----------VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG-EEDWPRDV-----ALPRQAFHSKS 248
                       170       180
                ....*....|....*....|....*..
gi 14165272 499 SARVAANVLHLSLWGEHILalknLKLD 525
Cdd:cd07862 249 AQPIEKFVTDIDELGKDLL----LKCL 271
STKc_MELK cd14078
Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; ...
356-497 8.81e-04

Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MELK is a cell cycle dependent protein which functions in cytokinesis, cell cycle, apoptosis, cell proliferation, and mRNA processing. It is found upregulated in many types of cancer cells, playing an indispensable role in cancer cell survival. It makes an attractive target in the design of inhibitors for use in the treatment of a wide range of human cancer. The MELK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270980 [Multi-domain]  Cd Length: 257  Bit Score: 41.21  E-value: 8.81e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 356 QGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLADES-IGLQLPFSSwyvdrgGNGCLMAPEVSTARPgpravidY--S 432
Cdd:cd14078 120 QGYAHRDLKPENLLLDEDQN----LKLIDFGLCAKPKGgMDHHLETCC------GSPAYAAPELIQGKP-------YigS 182
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 433 KADAWAVGAIAYEIFGLVNPFYGQGKAHL----ESRSYQEaqlpalPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14078 183 EADVWSMGVLLYALLCGFLPFDDDNVMALyrkiQSGKYEE------PEWLSPSSKLLLDQMLQVDPKKR 245
STKc_Nek7 cd08229
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
433-498 9.40e-04

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270866 [Multi-domain]  Cd Length: 292  Bit Score: 41.56  E-value: 9.40e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 433 KADAWAVGAIAYEIFGLVNPFYGQgKAHLES--RSYQEAQLPALP-ESVPPDVRQLVRALLQREASKRP 498
Cdd:cd08229 208 KSDIWSLGCLLYEMAALQSPFYGD-KMNLYSlcKKIEQCDYPPLPsDHYSEELRQLVNMCINPDPEKRP 275
PTKc_FGFR1 cd05098
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs ...
266-449 9.43e-04

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. FGFR1 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270678 [Multi-domain]  Cd Length: 302  Bit Score: 41.54  E-value: 9.43e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIIRVLRAFTSSVPLLpgALVDYP------DVLPSRlHPEGLGHgrtlflvMKNYPCTLRQYLcvntpSPRLA 339
Cdd:cd05098  73 KMIGKHKNIINLLGACTQDGPLY--VIVEYAskgnlrEYLQAR-RPPGMEY-------CYNPSHNPEEQL-----SSKDL 137
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 340 AMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDpdgcPWLVIADFGCCLADESIGlqlpfsswYVDRGGNGCL----MA 415
Cdd:cd05098 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----NVMKIADFGLARDIHHID--------YYKKTTNGRLpvkwMA 205
                       170       180       190
                ....*....|....*....|....*....|....
gi 14165272 416 PEVSTARpgpravIDYSKADAWAVGAIAYEIFGL 449
Cdd:cd05098 206 PEALFDR------IYTHQSDVWSFGVLLWEIFTL 233
STKc_PLK3 cd14189
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the ...
349-499 9.59e-04

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK3, also called Prk or Fnk (FGF-inducible kinase), regulates angiogenesis and responses to DNA damage. Activated PLK3 mediates Chk2 phosphorylation by ATM and the resulting checkpoint activation. PLK3 phosphorylates DNA polymerase delta and may be involved in DNA repair. It also inhibits Cdc25c, thereby regulating the onset of mitosis. The PLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271091 [Multi-domain]  Cd Length: 255  Bit Score: 41.07  E-value: 9.59e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCLADEsiglqlPFSSWYVDRGGNGCLMAPEVSTARP-GPra 427
Cdd:cd14189 113 GLKYLHLKGILHRDLKLGNFFINENME----LKVGDFGLAARLE------PPEQRKKTICGTPNYLAPEVLLRQGhGP-- 180
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 428 vidysKADAWAVGAIAYEIFGLVNPFygQGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14189 181 -----ESDVWSLGCVMYTLLCGNPPF--ETLDLKETYRCIKQVKYTLPASLSLPARHLLAGILKRNPGDRLT 245
PK_TRB cd13976
Pseudokinase domain of Tribbles Homolog proteins; The pseudokinase domain shows similarity to ...
403-500 1.07e-03

Pseudokinase domain of Tribbles Homolog proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Tribbles Homolog (TRB) proteins interact with many proteins involved in signaling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, differentiation, and gene expression. TRB proteins bind to the middle kinase in mitogen activated protein kinase (MAPK) signaling cascades, MAPK kinases. They regulate the activity of MAPK kinases, and thus, affect MAPK signaling. In Drosophila, Tribbles regulates String, the ortholog of mammalian Cdc25, during morphogenesis. String is implicated in the progression of mitosis during embryonic development. Vertebrates contain three TRB proteins encoded by three separate genes: Tribbles-1 (TRB1 or TRIB1), Tribbles-2 (TRB2 or TRIB2), and Tribbles-3 (TRB3 or TRIB3). The TRB subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270878 [Multi-domain]  Cd Length: 242  Bit Score: 40.87  E-value: 1.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 403 WYVDRGGNGCLMAPEVSTarpgPRAVIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRsYQEAQLpALPESVPPDV 482
Cdd:cd13976 142 SLSDKHGCPAYVSPEILN----SGATYSGKAADVWSLGVILYTMLVGRYPFHDSEPASLFAK-IRRGQF-AIPETLSPRA 215
                        90
                ....*....|....*...
gi 14165272 483 RQLVRALLQREASKRPSA 500
Cdd:cd13976 216 RCLIRSLLRREPSERLTA 233
STKc_TBK1 cd13988
Catalytic domain of the Serine/Threonine kinase, TANK Binding Kinase 1; STKs catalyze the ...
349-404 1.08e-03

Catalytic domain of the Serine/Threonine kinase, TANK Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TBK1 is also called T2K and NF-kB-activating kinase. It is widely expressed in most cell types and acts as an IkappaB kinase (IKK)-activating kinase responsible for NF-kB activation in response to growth factors. It plays a role in modulating inflammatory responses through the NF-kB pathway. TKB1 is also a major player in innate immune responses since it functions as a virus-activated kinase necessary for establishing an antiviral state. It phosphorylates IRF-3 and IRF-7, which are important transcription factors for inducing type I interferon during viral infection. In addition, TBK1 may also play roles in cell transformation and oncogenesis. The TBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270890 [Multi-domain]  Cd Length: 316  Bit Score: 41.32  E-value: 1.08e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIADFGcclADESIGLQLPFSSWY 404
Cdd:cd13988 108 GMNHLRENGIVHRDIKPGNIMRVIGEDGQSVYKLTDFG---AARELEDDEQFVSLY 160
STKc_NDR_like cd05599
Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases; STKs ...
360-454 1.17e-03

Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270750 [Multi-domain]  Cd Length: 324  Bit Score: 41.45  E-value: 1.17e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 360 HRDLKSDNILveLDPDGcpWLVIADFGCCLA-DESIglqLPFSSwyVdrgGNGCLMAPEVSTaRPGpravidYSK-ADAW 437
Cdd:cd05599 124 HRDIKPDNLL--LDARG--HIKLSDFGLCTGlKKSH---LAYST--V---GTPDYIAPEVFL-QKG------YGKeCDWW 184
                        90
                ....*....|....*....
gi 14165272 438 AVGAIAYEIfgLVN--PFY 454
Cdd:cd05599 185 SLGVIMYEM--LIGypPFC 201
PTKc_VEGFR1 cd14207
Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; ...
349-498 1.19e-03

Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR1 (or Flt1) binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. VEGFR1 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271109 [Multi-domain]  Cd Length: 340  Bit Score: 41.53  E-value: 1.19e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPdgcpWLVIADFGccladesIGLQLPFSSWYVdRGGNGCL----MAPEvstarpg 424
Cdd:cd14207 192 GMEFLSSRKCIHRDLAARNILLSENN----VVKICDFG-------LARDIYKNPDYV-RKGDARLplkwMAPE------- 252
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 425 prAVID--YS-KADAWAVGAIAYEIFGL-VNPFYG-QGKAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKRP 498
Cdd:cd14207 253 --SIFDkiYStKSDVWSYGVLLWEIFSLgASPYPGvQIDEDFCSKLKEGIRMRA-PEFATSEIYQIMLDCWQGDPNERP 328
STKc_PIM3 cd14102
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
348-499 1.25e-03

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3). PIM3 can inhibit apoptosis and promote cell survival and protein translation, therefore, it can enhance the proliferation of normal and cancer cells. Mice deficient with PIM3 show minimal effects, suggesting that PIM3 msy not be essential. Since its expression is enhanced in several cancers, it may make a good molecular target for cancer drugs. The PIM3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271004 [Multi-domain]  Cd Length: 253  Bit Score: 40.71  E-value: 1.25e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDGcpwLVIADFGC-CLADESIglqlpfsswYVDRGGNGCLMAPE-VSTARPGP 425
Cdd:cd14102 116 EAVRHCYSCGVVHRDIKDENLLVDLRTGE---LKLIDFGSgALLKDTV---------YTDFDGTRVYSPPEwIRYHRYHG 183
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 426 RAvidyskADAWAVGAIAYEIFGLVNPFYgQGKAHLESRSYqeaqlpaLPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14102 184 RS------ATVWSLGVLLYDMVCGDIPFE-QDEEILRGRLY-------FRRRVSPECQQLIKWCLSLRPSDRPT 243
STKc_Nek6 cd08228
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
349-498 1.31e-03

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270865 [Multi-domain]  Cd Length: 268  Bit Score: 40.78  E-value: 1.31e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVeldpdgcpwlvIADFGCCLADesIGLQLPFSSWYVDRG---GNGCLMAPEVSTARpgp 425
Cdd:cd08228 118 AVEHMHSRRVMHRDIKPANVFI-----------TATGVVKLGD--LGLGRFFSSKTTAAHslvGTPYYMSPERIHEN--- 181
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14165272 426 raviDYS-KADAWAVGAIAYEIFGLVNPFYGQgKAHLES--RSYQEAQLPALP-ESVPPDVRQLVRALLQREASKRP 498
Cdd:cd08228 182 ----GYNfKSDIWSLGCLLYEMAALQSPFYGD-KMNLFSlcQKIEQCDYPPLPtEHYSEKLRELVSMCIYPDPDQRP 253
PK_GC cd13992
Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows ...
357-500 1.35e-03

Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270894 [Multi-domain]  Cd Length: 268  Bit Score: 40.84  E-value: 1.35e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVeldpDGcPWLV-IADFGCC-LADESIGLQLPFSSWYVDRggngCLMAPEVSTARPGPRAVIdySKA 434
Cdd:cd13992 118 IGYHGRLKSSNCLV----DS-RWVVkLTDFGLRnLLEEQTNHQLDEDAQHKKL----LWTAPELLRGSLLEVRGT--QKG 186
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 435 DAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPE------SVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd13992 187 DVYSFAIILYEILFRSDPFALEREVAIVEKVISGGNKPFRPElavlldEFPPRLVLLVKQCWAENPEKRPSF 258
STKc_MSK2_C cd14180
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
350-512 1.36e-03

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271082 [Multi-domain]  Cd Length: 309  Bit Score: 41.01  E-value: 1.36e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDGCPWLVIaDFGCC--LADESIGLQLP-FSSWYVdrggngclmAPEVSTARpgpr 426
Cdd:cd14180 114 VSFMHEAGVVHRDLKPENILYADESDGAVLKVI-DFGFArlRPQGSRPLQTPcFTLQYA---------APELFSNQ---- 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 427 aviDYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLESRS------YQEAQLPALPES---VPPDVRQLVRALLQREask 496
Cdd:cd14180 180 ---GYDEScDLWSLGVILYTMLSGQVPFQSKRGKMFHNHAadimhkIKEGDFSLEGEAwkgVSEEAKDLVRGLLTVD--- 253
                       170
                ....*....|....*.
gi 14165272 497 rPSARVAANVLHLSLW 512
Cdd:cd14180 254 -PAKRLKLSELRESDW 268
STKc_nPKC_epsilon cd05591
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon; STKs catalyze ...
353-453 1.38e-03

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-epsilon subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270743 [Multi-domain]  Cd Length: 321  Bit Score: 40.94  E-value: 1.38e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 353 LVQQGIAHRDLKSDNILveLDPDG-CPwlvIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARP-GPravid 430
Cdd:cd05591 112 LHRHGVIYRDLKLDNIL--LDAEGhCK---LADFGMC--KEGILNGKTTTTFC----GTPDYIAPEILQELEyGP----- 175
                        90       100
                ....*....|....*....|...
gi 14165272 431 ysKADAWAVGAIAYEIFGLVNPF 453
Cdd:cd05591 176 --SVDWWALGVLMYEMMAGQPPF 196
PTKc_FGFR2 cd05101
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs ...
266-449 1.39e-03

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. FGFR2 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270679 [Multi-domain]  Cd Length: 313  Bit Score: 41.15  E-value: 1.39e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 266 KQLAPHPNIIRVLRAFTSSVPLLpgALVDYP------DVLPSRlHPEGLGHGRTLFLVmKNYPCTLRQYLCVNTPSPRla 339
Cdd:cd05101  84 KMIGKHKNIINLLGACTQDGPLY--VIVEYAskgnlrEYLRAR-RPPGMEYSYDINRV-PEEQMTFKDLVSCTYQLAR-- 157
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 340 ammllqlleGVDHLVQQGIAHRDLKSDNILVELDpdgcPWLVIADFGCCLADESIGlqlpfsswYVDRGGNGCL----MA 415
Cdd:cd05101 158 ---------GMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID--------YYKKTTNGRLpvkwMA 216
                       170       180       190
                ....*....|....*....|....*....|....
gi 14165272 416 PEVSTARpgpravIDYSKADAWAVGAIAYEIFGL 449
Cdd:cd05101 217 PEALFDR------VYTHQSDVWSFGVLMWEIFTL 244
PHA03211 PHA03211
serine/threonine kinase US3; Provisional
293-445 1.45e-03

serine/threonine kinase US3; Provisional


Pssm-ID: 223009 [Multi-domain]  Cd Length: 461  Bit Score: 41.42  E-value: 1.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  293 VDYPDVLPS-RLHPEGlghGRTLfLVMKNYPCTLRQYLCvNTPSPRLAAMMLLQLLE---GVDHLVQQGIAHRDLKSDNI 368
Cdd:PHA03211 217 LSHPAVLALlDVRVVG---GLTC-LVLPKYRSDLYTYLG-ARLRPLGLAQVTAVARQllsAIDYIHGEGIIHRDIKTENV 291
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272  369 LVELDPDGCpwlvIADFG-CCLADESIGLQLPFS-SWYVDRGgngclmAPEVSTARPGPRAVidyskaDAWAVGAIAYE 445
Cdd:PHA03211 292 LVNGPEDIC----LGDFGaACFARGSWSTPFHYGiAGTVDTN------APEVLAGDPYTPSV------DIWSAGLVIFE 354
STKc_MPK1 cd07857
Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; ...
360-456 1.53e-03

Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. MAPKs are important mediators of cellular responses to extracellular signals. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173750 [Multi-domain]  Cd Length: 332  Bit Score: 40.85  E-value: 1.53e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 360 HRDLKSDNILVELDpdgCPwLVIADFG-CCLADESIGLQLPF------SSWYvdrggngclMAPEV--STARpgpravid 430
Cdd:cd07857 128 HRDLKPGNLLVNAD---CE-LKICDFGlARGFSENPGENAGFmteyvaTRWY---------RAPEImlSFQS-------- 186
                        90       100
                ....*....|....*....|....*..
gi 14165272 431 YSKA-DAWAVGAIAYEIFGLVNPFYGQ 456
Cdd:cd07857 187 YTKAiDVWSVGCILAELLGRKPVFKGK 213
PTKc_EphR_A2 cd05063
Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2; PTKs catalyze the ...
349-498 1.56e-03

Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. EphRs comprise the largest subfamily of receptor PTKs (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 133194 [Multi-domain]  Cd Length: 268  Bit Score: 40.73  E-value: 1.56e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgCPwlvIADFGC--CLADESIGLqlpfsswYVDRGGNGCL--MAPEVSTARPG 424
Cdd:cd05063 119 GMKYLSDMNYVHRDLAARNILVNSNLE-CK---VSDFGLsrVLEDDPEGT-------YTTSGGKIPIrwTAPEAIAYRKF 187
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14165272 425 PravidySKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEA-QLPAlPESVPPDVRQLVRALLQREASKRP 498
Cdd:cd05063 188 T------SASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGfRLPA-PMDCPSAVYQLMLQCWQQDRARRP 255
PTKc_Tec_like cd05059
Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
348-502 1.60e-03

Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Tec-like subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nonreceptor PTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. Tec kinases play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). The Tec-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173637 [Multi-domain]  Cd Length: 256  Bit Score: 40.51  E-value: 1.60e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVeldpdGCPWLV-IADFGCC---LADE---SIGLQLPFSsWyvdrggngclMAPEVst 420
Cdd:cd05059 111 EAMEYLESNGFIHRDLAARNCLV-----GEQNVVkVSDFGLAryvLDDEytsSVGTKFPVK-W----------SPPEV-- 172
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 421 arpgpravIDY----SKADAWAVGAIAYEIFGLvnpfygqGKAHLESRSYQEA--------QLPAlPESVPPDVRQLVRA 488
Cdd:cd05059 173 --------FMYskfsSKSDVWSFGVLMWEVFSE-------GKMPYERFSNSEVvehisqgyRLYR-PHLAPTEVYTIMYS 236
                       170
                ....*....|....
gi 14165272 489 LLQREASKRPSARV 502
Cdd:cd05059 237 CWHEKPEERPTFKI 250
STKc_Raf cd14062
Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) ...
348-498 1.61e-03

Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Raf kinases act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. Aberrant expression or activation of components in this pathway are associated with tumor initiation, progression, and metastasis. Raf proteins contain a Ras binding domain, a zinc finger cysteine-rich domain, and a catalytic kinase domain. Vertebrates have three Raf isoforms (A-, B-, and C-Raf) with different expression profiles, modes of regulation, and abilities to function in the ERK cascade, depending on cellular context and stimuli. They have essential and non-overlapping roles during embryo- and organogenesis. Knockout of each isoform results in a lethal phenotype or abnormality in most mouse strains. The Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270964 [Multi-domain]  Cd Length: 253  Bit Score: 40.45  E-value: 1.61e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveLDPDGCpwLVIADFGccLA------DESIGLQLPFSS--WyvdrggngclMAPEVS 419
Cdd:cd14062 100 QGMDYLHAKNIIHRDLKSNNIF--LHEDLT--VKIGDFG--LAtvktrwSGSQQFEQPTGSilW----------MAPEVI 163
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 420 TAR-PGPravidYS-KADAWAVGAIAYEIFGLVNPFYGQGKA----HLESRSYQEAQLPALPESVPPDVRQLVRALLQRE 493
Cdd:cd14062 164 RMQdENP-----YSfQSDVYAFGIVLYELLTGQLPYSHINNRdqilFMVGRGYLRPDLSKVRSDTPKALRRLMEDCIKFQ 238

                ....*
gi 14165272 494 ASKRP 498
Cdd:cd14062 239 RDERP 243
PHA03207 PHA03207
serine/threonine kinase US3; Provisional
311-511 1.64e-03

serine/threonine kinase US3; Provisional


Pssm-ID: 165473 [Multi-domain]  Cd Length: 392  Bit Score: 40.98  E-value: 1.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  311 GRTLFLVMKNYPCTLRQYLCVNTPSP-RLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDGcpwlVIADFG-CC 388
Cdd:PHA03207 158 KSTVCMVMPKYKCDLFTYVDRSGPLPlEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENA----VLGDFGaAC 233
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  389 LADESIglQLPfsswyVDRGGNGCLM--APEVSTARPgpravidY-SKADAWAVGAIAYE-------IFGLVNPFYG-QG 457
Cdd:PHA03207 234 KLDAHP--DTP-----QCYGWSGTLEtnSPELLALDP-------YcAKTDIWSAGLVLFEmsvknvtLFGKQVKSSSsQL 299
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272  458 KAHLESRSYQEAQLPA------------------LPESVPP---------DVRQLVRALLQREASKRPSARvaaNVLHLS 510
Cdd:PHA03207 300 RSIIRCMQVHPLEFPQngstnlckhfkqyaivlrPPYTIPPvirkygmhmDVEYLIAKMLTFDQEFRPSAQ---DILSLP 376

                 .
gi 14165272  511 L 511
Cdd:PHA03207 377 L 377
PTKc_Frk_like cd05068
Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
349-499 1.76e-03

Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Frk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270653 [Multi-domain]  Cd Length: 267  Bit Score: 40.47  E-value: 1.76e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVElDPDGCPwlvIADFGccLADesiglqlpfsswyvdrggngCLMAPEVSTARPGPRAV 428
Cdd:cd05068 116 GMAYLESQNYIHRDLAARNVLVG-ENNICK---VADFG--LAR--------------------VIKVEDEYEAREGAKFP 169
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 IDYS------------KADAWAVGAIAYEI--FGLVnPFYGQGKAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREA 494
Cdd:cd05068 170 IKWTapeaanynrfsiKSDVWSFGILLTEIvtYGRI-PYPGMTNAEVLQQVERGYRMPC-PPNCPPQLYDIMLECWKADP 247

                ....*
gi 14165272 495 SKRPS 499
Cdd:cd05068 248 MERPT 252
STKc_DCKL2 cd14184
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 2 (also called ...
358-500 1.78e-03

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 2 (also called Doublecortin-like and CAM kinase-like 2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL2 (or DCAMKL2) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL2 contains a serine, threonine, and proline rich domain (SP) and a C-terminal kinase domain with similarity to CAMKs. DCKL2 has been shown to interact with tubulin, JIP1/2, JNK, neurabin 2, and actin. It is associated with the terminal segments of axons and dendrites, and may function as a phosphorylation-dependent switch to control microtubule dynamics in neuronal growth cones. The DCKL2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271086 [Multi-domain]  Cd Length: 259  Bit Score: 40.40  E-value: 1.78e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 358 IAHRDLKSDNILVELDPDGCPWLVIADFGCCLADESIGLQLPFSSWYVdrggngclmAPEVsTARPGpravidYS-KADA 436
Cdd:cd14184 120 IVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYV---------APEI-IAETG------YGlKVDI 183
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 437 WAVGAIAYEIFGLVNPFygQGKAHLESRSYQEAQLPALP------ESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14184 184 WAAGVITYILLCGFPPF--RSENNLQEDLFDQILLGKLEfpspywDNITDSAKELISHMLQVNVEARYTA 251
PK_Unc-89_rpt1 cd14109
Pseudokinase domain, first repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein ...
349-455 1.80e-03

Pseudokinase domain, first repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein 89; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. The nematode Unc-89 gene, through alternative promoter use and splicing, encodes at least six major isoforms (Unc-89A to Unc-89F) of giant muscle proteins that are homologs for the vetebrate obscurin. In flies, five isoforms of Unc-89 have been detected: four in the muscles of adult flies (two in the indirect flight muscle and two in other muscles) and another isoform in the larva. Unc-89 in nematodes is required for normal muscle cell architecture. In flies, it is necessary for the development of a symmetrical sarcomere in the flight muscles. Unc-89 proteins contain several adhesion and signaling domains including multiple copies of the immunoglobulin (Ig) domain, as well as fibronectin type III (FN3), SH3, RhoGEF, and PH domains. The nematode Unc-89 isoforms D, C, D, and F contain two kinase domain with B and F having two complete kinase domains while the first repeat of C and D are partial domains. Homology modeling suggests that the first kinase repeat of Unc-89 may be catalytically inactive, a pseudokinase, while the second kinase repeat may be active. The pseudokinase domain may function as a regulatory domain or a protein interaction domain. The Unc-89 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271011 [Multi-domain]  Cd Length: 255  Bit Score: 40.57  E-value: 1.80e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPdgcpwLVIADFGccladesIGLQLPFSSWYVDRGGNGCLMAPEVSTARPGPRAv 428
Cdd:cd14109 111 ALKHMHDLGIAHLDLRPEDILLQDDK-----LKLADFG-------QSRRLLRGKLTTLIYGSPEFVSPEIVNSYPVTLA- 177
                        90       100
                ....*....|....*....|....*..
gi 14165272 429 idyskADAWAVGAIAYEIFGLVNPFYG 455
Cdd:cd14109 178 -----TDMWSVGVLTYVLLGGISPFLG 199
STKc_SnRK2-3 cd14665
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
349-503 1.91e-03

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2, group 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK2 is represented in this cd. SnRK2s are involved in plant response to abiotic stresses and abscisic acid (ABA)-dependent plant development. The SnRK2s subfamily is in turn classed into three subgroups, all 3 of which are represented in this CD. Group 1 comprises kinases not activated by ABA, group 2 - kinases not activated or activated very weakly by ABA (depending on plant species), and group 3 - kinases strongly activated by ABA. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271135 [Multi-domain]  Cd Length: 257  Bit Score: 40.35  E-value: 1.91e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGCPWLVIADFGccLADESIGLQLPFSSWyvdrgGNGCLMAPEVSTarpgpRAV 428
Cdd:cd14665 108 GVSYCHSMQICHRDLKLENTL--LDGSPAPRLKICDFG--YSKSSVLHSQPKSTV-----GTPAYIAPEVLL-----KKE 173
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14165272 429 IDYSKADAWAVGAIAYEIFGLVNPFygqgKAHLESRSYQEA--QLPALPESVPPDVRQLV--RALLQREASKRPSARVA 503
Cdd:cd14665 174 YDGKIADVWSCGVTLYVMLVGAYPF----EDPEEPRNFRKTiqRILSVQYSIPDYVHISPecRHLISRIFVADPATRIT 248
STKc_Mos cd13979
Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze ...
349-432 2.16e-03

Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mos (or c-Mos) is a germ-cell specific kinase that plays roles in both the release of primary arrest and the induction of secondary arrest in oocytes. It is expressed towards the end of meiosis I and is quickly degraded upon fertilization. It is a component of the cytostatic factor (CSF), which is responsible for metaphase II arrest. In addition, Mos activates a phoshorylation cascade that leads to the activation of the p34 subunit of MPF (mitosis-promoting factor or maturation promoting factor), a cyclin-dependent kinase that is responsible for the release of primary arrest in meiosis I. The Mos subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270881 [Multi-domain]  Cd Length: 265  Bit Score: 40.06  E-value: 2.16e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDpDGCPwlvIADFGCC-LADESIGLQLPFSSwyvdRGGNGCLMAPEV-STARPGPR 426
Cdd:cd13979 115 ALRFCHSHGIVHLDVKPANILISEQ-GVCK---LCDFGCSvKLGEGNEVGTPRSH----IGGTYTYRAPELlKGERVTPK 186

                ....*.
gi 14165272 427 AVIdYS 432
Cdd:cd13979 187 ADI-YS 191
STKc_Aurora-A cd14116
Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer ...
356-501 2.19e-03

Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2, which also localizes the kinase to spindle microtubules. Aurora-A is overexpressed in many cancer types such as prostate, ovarian, breast, bladder, gastric, and pancreatic. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271018 [Multi-domain]  Cd Length: 258  Bit Score: 40.33  E-value: 2.19e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 356 QGIAHRDLKSDNILVELDPDgcpwLVIADFGCcladesiGLQLPfSSWYVDRGGNGCLMAPEVSTARpgpravIDYSKAD 435
Cdd:cd14116 124 KRVIHRDIKPENLLLGSAGE----LKIADFGW-------SVHAP-SSRRTTLCGTLDYLPPEMIEGR------MHDEKVD 185
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 436 AWAVGAIAYEIfgLVnpfygqGKAHLESRSYQEAQLP------ALPESVPPDVRQLVRALLQREASKRPSAR 501
Cdd:cd14116 186 LWSLGVLCYEF--LV------GKPPFEANTYQETYKRisrvefTFPDFVTEGARDLISRLLKHNPSQRPMLR 249
PTKc_Wee1_fungi cd14052
Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the ...
348-500 2.22e-03

Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of fungal Wee1 proteins, also called Swe1 in budding yeast and Mik1 in fission yeast. Yeast Wee1 is required to control cell size. Wee1 is a cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. The fungal Wee1 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270954 [Multi-domain]  Cd Length: 278  Bit Score: 40.10  E-value: 2.22e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLAdesiglqlpfSSWYVDRG----GNGCLMAPEVSTarp 423
Cdd:cd14052 117 LGLRFIHDHHFVHLDLKPANVLITFEGT----LKIGDFG--MA----------TVWPLIRGiereGDREYIAPEILS--- 177
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 gpRAVIDYsKADAWAVGAIAYEIFG-LVNPFYGQGKAHLESRSYQEA-------------QLPALPESVPPDVR------ 483
Cdd:cd14052 178 --EHMYDK-PADIFSLGLILLEAAAnVVLPDNGDAWQKLRSGDLSDAprlsstdlhsassPSSNPPPDPPNMPIlsgsld 254
                       170
                ....*....|....*..
gi 14165272 484 QLVRALLQREASKRPSA 500
Cdd:cd14052 255 RVVRWMLSPEPDRRPTA 271
PK_TRB2 cd14022
Pseudokinase domain of Tribbles Homolog 2; The pseudokinase domain shows similarity to protein ...
406-501 2.58e-03

Pseudokinase domain of Tribbles Homolog 2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. TRB2 binds and negatively regulates the mitogen activated protein kinase (MAPK) kinases, MKK7 and MEK1, which are activators of the MAPKs, ERK and JNK. It controls the activation of inflammatory monocytes, which is essential in innate immune responses and the pathogenesis of inflammatory diseases such as atherosclerosis. TRB2 expression is down-regulated in human acute myeloid leukaemia (AML), which may lead to enhanced cell survival and pathogenesis of the disease. TRB2 is one of three Tribbles Homolog (TRB) proteins present in vertebrates that are encoded by three separate genes. TRB proteins interact with many proteins involved in signalling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, and gene expression. The TRB2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270924 [Multi-domain]  Cd Length: 242  Bit Score: 40.02  E-value: 2.58e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 406 DRGGNGCLMAPEVSTARPgpraviDYS--KADAWAVGAIAYEIFGLVNPFYGQGKAHLESRsYQEAQLpALPESVPPDVR 483
Cdd:cd14022 145 DKHGCPAYVSPEILNTSG------SYSgkAADVWSLGVMLYTMLVGRYPFHDIEPSSLFSK-IRRGQF-NIPETLSPKAK 216
                        90
                ....*....|....*...
gi 14165272 484 QLVRALLQREASKRPSAR 501
Cdd:cd14022 217 CLIRSILRREPSERLTSQ 234
STKc_nPKC_eta cd05590
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the ...
353-515 2.58e-03

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-eta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270742 [Multi-domain]  Cd Length: 323  Bit Score: 40.28  E-value: 2.58e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 353 LVQQGIAHRDLKSDNILveLDPDG-CPwlvIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEV-STARPGPravid 430
Cdd:cd05590 112 LHDKGIIYRDLKLDNVL--LDHEGhCK---LADFGMC--KEGIFNGKTTSTFC----GTPDYIAPEIlQEMLYGP----- 175
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 431 ysKADAWAVGAIAYEIFGlvnpfygqGKAHLESRSYQEAQLPALPESV--PPDVRQLVRALLQREASKRPSARVAAnvlh 508
Cdd:cd05590 176 --SVDWWAMGVLLYEMLC--------GHAPFEAENEDDLFEAILNDEVvyPTWLSQDAVDILKAFMTKNPTMRLGS---- 241

                ....*..
gi 14165272 509 LSLWGEH 515
Cdd:cd05590 242 LTLGGEE 248
STKc_MEKK3_like_u1 cd06653
Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP) ...
348-500 2.60e-03

Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of uncharacterized proteins with similarity to MEKK3, MEKK2, and related proteins; they contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKKs), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270819 [Multi-domain]  Cd Length: 264  Bit Score: 40.01  E-value: 2.60e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILveldPDGCPWLVIADFGCCLADESIGLQlpfSSWYVDRGGNGCLMAPEVSTARPGPRa 427
Cdd:cd06653 117 QGVSYLHSNMIVHRDIKGANIL----RDSAGNVKLGDFGASKRIQTICMS---GTGIKSVTGTPYWMSPEVISGEGYGR- 188
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 428 vidysKADAWAVGAIAYEIFGLVNPFygqgkAHLESRS--YQEAQLPALPEsVPPDVRQLVRALLQR---EASKRPSA 500
Cdd:cd06653 189 -----KADVWSVACTVVEMLTEKPPW-----AEYEAMAaiFKIATQPTKPQ-LPDGVSDACRDFLRQifvEEKRRPTA 255
STKc_PCTAIRE1 cd07873
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase; STKs catalyze the transfer ...
312-519 2.65e-03

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270854 [Multi-domain]  Cd Length: 297  Bit Score: 39.99  E-value: 2.65e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 312 RTLFLVMKNYPCTLRQYL--CVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCL 389
Cdd:cd07873  73 KSLTLVFEYLDKDLKQYLddCGNSINMHNVKLFLFQLLRGLAYCHRRKVLHRDLKPQNLLINERGE----LKLADFGLAR 148
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 390 AdESIGLQlPFSS-----WY---------------VDRGGNGCLMApEVSTARP-GPRAVIDYS-----------KADAW 437
Cdd:cd07873 149 A-KSIPTK-TYSNevvtlWYrppdillgstdystqIDMWGVGCIFY-EMSTGRPlFPGSTVEEQlhfifrilgtpTEETW 225
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 438 AvGAIAYEIFglvnpfygqgKAHLESRSYQEAQLPALPEsVPPDVRQLVRALLQREASKRPSARVAANVLHLSLWGEHIL 517
Cdd:cd07873 226 P-GILSNEEF----------KSYNYPKYRADALHNHAPR-LDSDGADLLSKLLQFEGRKRISAEEAMKHPYFHSLGERIH 293

                ..
gi 14165272 518 AL 519
Cdd:cd07873 294 KL 295
STKc_SHIK cd13974
Catalytic domain of the Serine/Threonine kinase, SINK-homologous inhibitory kinase; STKs ...
350-500 2.87e-03

Catalytic domain of the Serine/Threonine kinase, SINK-homologous inhibitory kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SHIK, also referred to as STK40 or LYK4, is a cytoplasmic and nuclear protein that is involved in the negative regulation of NF-kappaB- and p53-mediated transcription. It was identified as a protein related to SINK, a p65-interacting protein that inhibits p65 phosphorylation by the catalytic subunit of PKA, thereby inhibiting transcriptional competence of NF-kappaB. The SHIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270876 [Multi-domain]  Cd Length: 290  Bit Score: 40.08  E-value: 2.87e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDGcpwLVIADF--GCCLADESIGLQlpfsswyvDRGGNGCLMAPEVSTARPgpra 427
Cdd:cd13974 145 VEALHKKNIVHRDLKLGNMVLNKRTRK---ITITNFclGKHLVSEDDLLK--------DQRGSPAYISPDVLSGKP---- 209
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14165272 428 vidYS--KADAWAVGAIAYEI-FGLVnPFYGQGKAHLeSRSYQEAQLpALPES--VPPDVRQLVRALLQREASKRPSA 500
Cdd:cd13974 210 ---YLgkPSDMWALGVVLFTMlYGQF-PFYDSIPQEL-FRKIKAAEY-TIPEDgrVSENTVCLIRKLLVLNPQKRLTA 281
STKc_TAK1 cd14058
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated ...
348-499 3.25e-03

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated Kinase-1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAK1 is also known as mitogen-activated protein kinase kinase kinase 7 (MAPKKK7 or MAP3K7), TAK, or MEKK7. As a MAPKKK, it is an important mediator of cellular responses to extracellular signals. It regulates both the c-Jun N-terminal kinase and p38 MAPK cascades by activating the MAPK kinases, MKK4 and MKK3/6. In addition, TAK1 plays diverse roles in immunity and development, in different biological contexts, through many signaling pathways including TGFbeta/BMP, Wnt/Fz, and NF-kB. It is also implicated in the activation of the tumor suppressor kinase, LKB1. The TAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270960 [Multi-domain]  Cd Length: 253  Bit Score: 39.73  E-value: 3.25e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHL---VQQGIAHRDLKSDNILVEldpDGCPWLVIADFgccladesiGLQLPFSSWYVDRGGNGCLMAPEVSTARpg 424
Cdd:cd14058 100 KGVAYLhsmKPKALIHRDLKPPNLLLT---NGGTVLKICDF---------GTACDISTHMTNNKGSAAWMAPEVFEGS-- 165
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 425 praviDYS-KADAWAVGAIAYEIFGLVNPFygqgkAHLESRSYQEAQL------PALPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14058 166 -----KYSeKCDVFSWGIILWEVITRRKPF-----DHIGGPAFRIMWAvhngerPPLIKNCPKPIESLMTRCWSKDPEKR 235

                ..
gi 14165272 498 PS 499
Cdd:cd14058 236 PS 237
STKc_ERK1_2_like cd07849
Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine ...
357-447 3.26e-03

Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270839 [Multi-domain]  Cd Length: 336  Bit Score: 39.98  E-value: 3.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 357 GIAHRDLKSDNILVELDPDgcpwLVIADFGccLA-------DESIGL-QLPFSSWYvdrggngclMAPEVSTARPGprav 428
Cdd:cd07849 126 NVLHRDLKPSNLLLNTNCD----LKICDFG--LAriadpehDHTGFLtEYVATRWY---------RAPEIMLNSKG---- 186
                        90       100
                ....*....|....*....|
gi 14165272 429 idYSKA-DAWAVGAIAYEIF 447
Cdd:cd07849 187 --YTKAiDIWSVGCILAEML 204
PTKc_Abl cd05052
Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase; PTKs catalyze the transfer of ...
349-499 3.44e-03

Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) PTK that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. The Abl subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270645 [Multi-domain]  Cd Length: 263  Bit Score: 39.71  E-value: 3.44e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVEldpdGCPWLVIADFGccLADesiglqlpfsswyvdrggngcLMAPEVSTARPGPRAV 428
Cdd:cd05052 116 AMEYLEKKNFIHRDLAARNCLVG----ENHLVKVADFG--LSR---------------------LMTGDTYTAHAGAKFP 168
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 429 IDY------------SKADAWAVGAIAYEI--FGLvNPFYG---QGKAHLESRSYQEAQlpalPESVPPDVRQLVRALLQ 491
Cdd:cd05052 169 IKWtapeslaynkfsIKSDVWAFGVLLWEIatYGM-SPYPGidlSQVYELLEKGYRMER----PEGCPPKVYELMRACWQ 243

                ....*...
gi 14165272 492 REASKRPS 499
Cdd:cd05052 244 WNPSDRPS 251
STKc_TSSK1_2-like cd14165
Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; ...
350-497 3.53e-03

Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK2 is localized in the sperm neck, equatorial segment, and mid-piece of the sperm tail. Both TSSK1 and TSSK2 phosphorylate their common substrate TSKS (testis-specific-kinase-substrate). TSSK1/TSSK2 double knock-out mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271067 [Multi-domain]  Cd Length: 263  Bit Score: 39.38  E-value: 3.53e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 350 VDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGC---CLADESIGLQLpfSSWYVdrgGNGCLMAPEVSTARP-GP 425
Cdd:cd14165 115 IKYCHELDIVHRDLKCENLLLDKDFN----IKLTDFGFskrCLRDENGRIVL--SKTFC---GSAAYAAPEVLQGIPyDP 185
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 426 RavidysKADAWAVGAIAYEIFGLVNPFYGQG-KAHLESRSYQEAQLPAlPESVPPDVRQLVRALLQREASKR 497
Cdd:cd14165 186 R------IYDIWSLGVILYIMVCGSMPYDDSNvKKMLKIQKEHRVRFPR-SKNLTSECKDLIYRLLQPDVSQR 251
STKc_KSR1 cd14152
Catalytic domain of the Serine/Threonine Kinase, Kinase Suppressor of Ras 1; STKs catalyze the ...
348-507 3.55e-03

Catalytic domain of the Serine/Threonine Kinase, Kinase Suppressor of Ras 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. KSR1 functions as a transducer of TNFalpha-stimulated C-Raf activation of ERK1/2 and NF-kB. Detected activity of KSR1 is cell type specific and context dependent. It is inactive in normal colon epithelial cells and becomes activated at the onset of inflammatory bowel disease (IBD). Similarly, KSR1 activity is undetectable prior to stimulation by EGF or ceramide in COS-7 or YAMC cells, respectively. KSR proteins are widely regarded as pseudokinases, however, this matter is up for debate as catalytic activity has been detected for KSR1 in some systems. The KSR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271054 [Multi-domain]  Cd Length: 279  Bit Score: 39.57  E-value: 3.55e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPdgcpwLVIADFGCCLADESIG-------LQLPfSSWYvdrggngCLMAPE-VS 419
Cdd:cd14152 108 KGMGYLHAKGIVHKDLKSKNVFYDNGK-----VVITDFGLFGISGVVQegrreneLKLP-HDWL-------CYLAPEiVR 174
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 420 TARPGPRA-VIDYSK-ADAWAVGAIAYEIFGLVNPFYGQGKahlESRSYQEAQLPALPE-----SVPPDVRQLVRALLQR 492
Cdd:cd14152 175 EMTPGKDEdCLPFSKaADVYAFGTIWYELQARDWPLKNQPA---EALIWQIGSGEGMKQvlttiSLGKEVTEILSACWAF 251
                       170
                ....*....|....*
gi 14165272 493 EASKRPSARVAANVL 507
Cdd:cd14152 252 DLEERPSFTLLMDML 266
STKc_JNK2 cd07876
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the ...
271-446 4.00e-03

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK2 is expressed in every cell and tissue type. It is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143381 [Multi-domain]  Cd Length: 359  Bit Score: 39.63  E-value: 4.00e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 271 HPNIIRVLRAFTSSvpllpGALVDYPDV----------LPSRLHPEgLGHGRTLFLvmknypctLRQYLCvntpsprlaa 340
Cdd:cd07876  79 HKNIISLLNVFTPQ-----KSLEEFQDVylvmelmdanLCQVIHME-LDHERMSYL--------LYQMLC---------- 134
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 341 mmllqlleGVDHLVQQGIAHRDLKSDNILVELDpdgCPwLVIADFGCCLADESIGLQLPF--SSWYvdrggngclMAPEV 418
Cdd:cd07876 135 --------GIKHLHSAGIIHRDLKPSNIVVKSD---CT-LKILDFGLARTACTNFMMTPYvvTRYY---------RAPEV 193
                       170       180
                ....*....|....*....|....*....
gi 14165272 419 STArpgpravIDYSK-ADAWAVGAIAYEI 446
Cdd:cd07876 194 ILG-------MGYKEnVDIWSVGCIMGEL 215
PTKc_FGFR4 cd05099
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs ...
349-499 4.25e-03

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. FGFR4 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR4 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133230 [Multi-domain]  Cd Length: 314  Bit Score: 39.56  E-value: 4.25e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDpdgcPWLVIADFGCCLADESIGlqlpfsswYVDRGGNGCL----MAPEVSTARpg 424
Cdd:cd05099 146 GMEYLESRRCIHRDLAARNVLVTED----NVMKIADFGLARGVHDID--------YYKKTSNGRLpvkwMAPEALFDR-- 211
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 425 pravIDYSKADAWAVGAIAYEIFGL-VNPFYGQGKAHLeSRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPS 499
Cdd:cd05099 212 ----VYTHQSDVWSFGILMWEIFTLgGSPYPGIPVEEL-FKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPT 282
STKc_MST4 cd06640
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs ...
348-501 4.26e-03

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132971 [Multi-domain]  Cd Length: 277  Bit Score: 39.27  E-value: 4.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLADESIGLQLPFSSWYvdrgGNGCLMAPEVSTarpgpRA 427
Cdd:cd06640 112 KGLDYLHSEKKIHRDIKAANVLLSEQGD----VKLADFG--VAGQLTDTQIKRNTFV----GTPFWMAPEVIQ-----QS 176
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 VIDySKADAWAVGAIAYEIFGLVNPfygqgkahlESRSYQEAQLPALPESVPP--------DVRQLVRALLQREASKRPS 499
Cdd:cd06640 177 AYD-SKADIWSLGITAIELAKGEPP---------NSDMHPMRVLFLIPKNNPPtlvgdfskPFKEFIDACLNKDPSFRPT 246

                ..
gi 14165272 500 AR 501
Cdd:cd06640 247 AK 248
STKc_RCK1-like cd14096
Catalytic domain of RCK1-like Serine/Threonine Kinases; STKs catalyze the transfer of the ...
348-497 4.49e-03

Catalytic domain of RCK1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal STKs including Saccharomyces cerevisiae RCK1 and RCK2, Schizosaccharomyces pombe Sty1-regulated kinase 1 (Srk1), and similar proteins. RCK1, RCK2 (or Rck2p), and Srk1 are MAPK-activated protein kinases. RCK1 and RCK2 are involved in oxidative and metal stress resistance in budding yeast. RCK2 also regulates rapamycin sensitivity in both S. cerevisiae and Candida albicans. Srk1 is activated by Sty1/Spc1 and is involved in negatively regulating cell cycle progression by inhibiting Cdc25. The RCK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270998 [Multi-domain]  Cd Length: 295  Bit Score: 39.34  E-value: 4.49e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVE-------------LDPD----------------GCPWLVIADFGCCLADESIGLQL 398
Cdd:cd14096 117 SAVKYLHEIGVVHRDIKPENLLFEpipfipsivklrkADDDetkvdegefipgvgggGIGIVKLADFGLSKQVWDSNTKT 196
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 399 PFsswyvdrgGNGCLMAPEVSTARpgpraviDYSKA-DAWAVGAIAYEIFGLVNPFYGQGKAHLE---SRSYQEAQLPAL 474
Cdd:cd14096 197 PC--------GTVGYTAPEVVKDE-------RYSKKvDMWALGCVLYTLLCGFPPFYDESIETLTekiSRGDYTFLSPWW 261
                       170       180
                ....*....|....*....|...
gi 14165272 475 PEsVPPDVRQLVRALLQREASKR 497
Cdd:cd14096 262 DE-ISKSAKDLISHLLTVDPAKR 283
STKc_MAP4K5 cd06646
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
348-500 4.87e-03

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270813 [Multi-domain]  Cd Length: 268  Bit Score: 39.24  E-value: 4.87e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCC------LADESIGLQLPFssWyvdrggngclMAPEVSTA 421
Cdd:cd06646 117 QGLAYLHSKGKMHRDIKGANILLTDNGD----VKLADFGVAakitatIAKRKSFIGTPY--W----------MAPEVAAV 180
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 422 RPGPraviDYSK-ADAWAVGAIAYEIFGLVNPFYG-QGKAHLESRSYQEAQLPALPESV--PPDVRQLVRALLQREASKR 497
Cdd:cd06646 181 EKNG----GYNQlCDIWAVGITAIELAELQPPMFDlHPMRALFLMSKSNFQPPKLKDKTkwSSTFHNFVKISLTKNPKKR 256

                ...
gi 14165272 498 PSA 500
Cdd:cd06646 257 PTA 259
STKc_BUR1 cd07866
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), ...
348-386 5.35e-03

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), Bypass UAS Requirement 1, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BUR1, also called SGV1, is a yeast CDK that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270849 [Multi-domain]  Cd Length: 311  Bit Score: 39.22  E-value: 5.35e-03
                        10        20        30
                ....*....|....*....|....*....|....*....
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVelDPDGCpwLVIADFG 386
Cdd:cd07866 126 EGINYLHENHILHRDIKAANILI--DNQGI--LKIADFG 160
STKc_PCTAIRE3 cd07871
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase; STKs catalyze the transfer ...
312-446 5.39e-03

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles. In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270853 [Multi-domain]  Cd Length: 288  Bit Score: 39.22  E-value: 5.39e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 312 RTLFLVMKNYPCTLRQYL--CVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGCCL 389
Cdd:cd07871  76 RCLTLVFEYLDSDLKQYLdnCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGE----LKLADFGLAR 151
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14165272 390 A---------DESIGLqlpfssWYvdRGGNGCLMAPEVSTArpgpravidyskADAWAVGAIAYEI 446
Cdd:cd07871 152 AksvptktysNEVVTL------WY--RPPDVLLGSTEYSTP------------IDMWGVGCILYEM 197
PTKc_Btk_Bmx cd05113
Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow ...
348-449 5.46e-03

Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor, leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. The Btk/Bmx subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173657 [Multi-domain]  Cd Length: 256  Bit Score: 39.09  E-value: 5.46e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVelDPDGCpwLVIADFGC---CLADE---SIGLQLPfsswyvdrggngclmapevstA 421
Cdd:cd05113 111 EAMEYLESKQFLHRDLAARNCLV--NDQGV--VKVSDFGLsryVLDDEytsSVGSKFP---------------------V 165
                        90       100       110
                ....*....|....*....|....*....|..
gi 14165272 422 RPGPRAVIDY----SKADAWAVGAIAYEIFGL 449
Cdd:cd05113 166 RWSPPEVLMYskfsSKSDVWAFGVLMWEVYSL 197
PTKc_Ror cd05048
Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan ...
348-512 5.52e-03

Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Ror subfamily consists of Ror1, Ror2, and similar proteins. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. The Ror subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270642 [Multi-domain]  Cd Length: 283  Bit Score: 38.90  E-value: 5.52e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVEldpdgcPWLV--IADFGccLADESiglqlpFSSWYVDRGGNGCL----MAPEvsta 421
Cdd:cd05048 135 AGMEYLSSHHYVHRDLAARNCLVG------DGLTvkISDFG--LSRDI------YSSDYYRVQSKSLLpvrwMPPE---- 196
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 422 rpgpraVIDYSK----ADAWAVGAIAYEIF--GLvNPFYGQgkahlesrSYQEA-------QLPALPESVPPDVRQLVRA 488
Cdd:cd05048 197 ------AILYGKftteSDVWSFGVVLWEIFsyGL-QPYYGY--------SNQEViemirsrQLLPCPEDCPARVYSLMVE 261
                       170       180
                ....*....|....*....|....
gi 14165272 489 LLQREASKRPSARVAANvlHLSLW 512
Cdd:cd05048 262 CWHEIPSRRPRFKEIHT--RLRTW 283
PKc_Myt1 cd14050
Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze ...
258-501 5.60e-03

Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Myt1 is a cytoplasmic cell cycle checkpoint kinase that can keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of N-terminal thr (T14) and tyr (Y15) residues, leading to the delay of meiosis I entry. Meiotic progression is ensured by a two-step inhibition and downregulation of Myt1 by CDK1/XRINGO and p90Rsk during oocyte maturation. In addition, Myt1 targets cyclin B1/B2 and is essential for Golgi and ER assembly during telophase. In Drosophila, Myt1 may be a downstream target of Notch during eye development. The Myt1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270952 [Multi-domain]  Cd Length: 249  Bit Score: 38.83  E-value: 5.60e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 258 YRKSK----RGPKQLAPHPNIIRVLRAFtssvpllpgalvdypdvlpsrlhpEGLGHgrtLFLVMKNYPCTLRQYlCVNT 333
Cdd:cd14050  43 DRKRKleevERHEKLGEHPNCVRFIKAW------------------------EEKGI---LYIQTELCDTSLQQY-CEET 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 334 PS--PRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILveLDPDG-CPwlvIADFGccladesIGLQLPFSSWYVDRGGN 410
Cdd:cd14050  95 HSlpESEVWNILLDLLKGLKHLHDHGLIHLDIKPANIF--LSKDGvCK---LGDFG-------LVVELDKEDIHDAQEGD 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 411 GCLMAPEVSTARPGPravidysKADAWAVGAIAYEI-FGLVNPFYGQGKAHLesrsyQEAQLPA-LPESVPPDVRQLVRA 488
Cdd:cd14050 163 PRYMAPELLQGSFTK-------AADIFSLGITILELaCNLELPSGGDGWHQL-----RQGYLPEeFTAGLSPELRSIIKL 230
                       250
                ....*....|...
gi 14165272 489 LLQREASKRPSAR 501
Cdd:cd14050 231 MMDPDPERRPTAE 243
STKc_SPEG_rpt1 cd14108
Catalytic kinase domain, first repeat, of Giant Serine/Threonine Kinase Striated muscle ...
348-456 5.91e-03

Catalytic kinase domain, first repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271010 [Multi-domain]  Cd Length: 255  Bit Score: 38.73  E-value: 5.91e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVEldPDGCPWLVIADFGCCLADEsiglqlPFSSWYVdRGGNGCLMAPEVSTARPGPra 427
Cdd:cd14108 108 EGIEYLHQNDVLHLDLKPENLLMA--DQKTDQVRICDFGNAQELT------PNEPQYC-KYGTPEFVAPEIVNQSPVS-- 176
                        90       100
                ....*....|....*....|....*....
gi 14165272 428 vidySKADAWAVGAIAYEIFGLVNPFYGQ 456
Cdd:cd14108 177 ----KVTDIWPVGVIAYLCLTGISPFVGE 201
PK_SCY1_like cd14011
Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein ...
356-500 6.13e-03

Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. This subfamily is composed of the catalytically inactive kinases with similarity to yeast Scy1. It includes four mammalian proteins called SCY1-like protein 1 (SCYL1), SCYL2, SCYL3, as well as Testis-EXpressed protein 14 (TEX14). SCYL1 binds to and co-localizes with the membrane trafficking coatomer I (COPI) complex, and regulates COPI-mediated vesicle trafficking. Null mutations in the SCYL1 gene are responsible for the pathology in mdf (muscle-deficient) mice which display progressive motor neuropathy. SCYL2, also called coated vesicle-associated kinase of 104 kDa (CVAK104), is involved in the trafficking of clathrin-coated vesicles. It also binds the HIV-1 accessory protein Vpu and acts as a regulatory factor that promotes the dephosphorylation of Vpu, facilitating the restriction of HIV-1 release. SCYL3, also called ezrin-binding protein PACE-1, may be involved in regulating cell adhesion and migration. TEX14 is required for spermatogenesis and male fertility. It localizes to kinetochores (KT) during mitosis and is a target of the mitotic kinase PLK1. It regulates the maturation of the outer KT and the KT-microtubule attachment. The SCY1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270913 [Multi-domain]  Cd Length: 287  Bit Score: 38.84  E-value: 6.13e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 356 QGIAHRDLKSDNILVelDPDGcPWlVIADFGCCLADESIGLQLPFSSWYVDRGGNGCL-----MAPEVSTArpgpraVID 430
Cdd:cd14011 134 VKLVHGNICPESVVI--NSNG-EW-KLAGFDFCISSEQATDQFPYFREYDPNLPPLAQpnlnyLAPEYILS------KTC 203
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14165272 431 YSKADAWAVGAIAYEIFGLVNPFY--GQGKAHLESRSYQEAQLP-ALPESVPPDVRQLVRALLQREASKRPSA 500
Cdd:cd14011 204 DPASDMFSLGVLIYAIYNKGKPLFdcVNNLLSYKKNSNQLRQLSlSLLEKVPEELRDHVKTLLNVTPEVRPDA 276
STKc_aPKC_zeta cd05617
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze ...
349-453 6.25e-03

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC-zeta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270768 [Multi-domain]  Cd Length: 357  Bit Score: 39.23  E-value: 6.25e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILveLDPDGcpWLVIADFGCClaDESIGLQLPFSSWYvdrgGNGCLMAPEVSTARpgprav 428
Cdd:cd05617 128 ALNFLHERGIIYRDLKLDNVL--LDADG--HIKLTDYGMC--KEGLGPGDTTSTFC----GTPNYIAPEILRGE------ 191
                        90       100
                ....*....|....*....|....*.
gi 14165272 429 iDYS-KADAWAVGAIAYEIFGLVNPF 453
Cdd:cd05617 192 -EYGfSVDWWALGVLMFEMMAGRSPF 216
STKc_CDK4 cd07863
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs ...
349-482 6.95e-03

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of TGF-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143368 [Multi-domain]  Cd Length: 288  Bit Score: 38.79  E-value: 6.95e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFG------CCLADESIGLQLpfssWYvdrggngclMAPEV---S 419
Cdd:cd07863 120 GLDFLHANCIVHRDLKPENILVTSGGQ----VKLADFGlariysCQMALTPVVVTL----WY---------RAPEVllqS 182
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14165272 420 T-ARPgpravidyskADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPAlPESVPPDV 482
Cdd:cd07863 183 TyATP----------VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDV 235
STKc_PLK4 cd14186
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the ...
349-499 8.58e-03

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK4, also called SAK or STK18, is structurally different from other PLKs in that it contains only one polo box that can form two adjacent polo boxes and a functional PDB by homodimerization. It is required for late mitotic progression, cell survival, and embryonic development. It localizes to centrosomes and is required for centriole duplication and chromosomal stability. Overexpression of PLK4 may be associated with colon tumors. The PLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271088 [Multi-domain]  Cd Length: 256  Bit Score: 38.30  E-value: 8.58e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 349 GVDHLVQQGIAHRDLKSDNILVELDPDgcpwLVIADFGccLADEsigLQLPFSSWYVdRGGNGCLMAPEVSTARPGPRav 428
Cdd:cd14186 114 GMLYLHSHGILHRDLTLSNLLLTRNMN----IKIADFG--LATQ---LKMPHEKHFT-MCGTPNYISPEIATRSAHGL-- 181
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14165272 429 idysKADAWAVGAIAYEIFGLVNPFYGQG-KAHLESRSYQEAQLPALpesVPPDVRQLVRALLQREASKRPS 499
Cdd:cd14186 182 ----ESDVWSLGCMFYTLLVGRPPFDTDTvKNTLNKVVLADYEMPAF---LSREAQDLIHQLLRKNPADRLS 246
PTKc_Lck_Blk cd05067
Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk; PTKs ...
348-507 9.43e-03

Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lck is expressed in T-cells and natural killer cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lck/Blk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270652 [Multi-domain]  Cd Length: 264  Bit Score: 38.33  E-value: 9.43e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVElDPDGCPwlvIADFGccLAdesiglQLPFSSWYVDRGGngcLMAPEVSTArpgPRA 427
Cdd:cd05067 114 EGMAFIEERNYIHRDLRAANILVS-DTLSCK---IADFG--LA------RLIEDNEYTAREG---AKFPIKWTA---PEA 175
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 428 vIDYS----KADAWAVGAIAYEIF--------GLVNPfygQGKAHLEsRSYQEAQlpalPESVPPDVRQLVRALLQREAS 495
Cdd:cd05067 176 -INYGtftiKSDVWSFGILLTEIVthgripypGMTNP---EVIQNLE-RGYRMPR----PDNCPEELYQLMRLCWKERPE 246
                       170
                ....*....|..
gi 14165272 496 KRPSARVAANVL 507
Cdd:cd05067 247 DRPTFEYLRSVL 258
PTKc_CSF-1R cd05106
Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor; PTKs ...
348-499 9.95e-03

Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. The CSF-1R subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133237 [Multi-domain]  Cd Length: 374  Bit Score: 38.67  E-value: 9.95e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 348 EGVDHLVQQGIAHRDLKSDNILVEldpDGcPWLVIADFGccLADESIGlqlpfSSWYVDRgGNGCL----MAPEvstarp 423
Cdd:cd05106 223 QGMDFLASKNCIHRDVAARNVLLT---DG-RVAKICDFG--LARDIMN-----DSNYVVK-GNARLpvkwMAPE------ 284
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14165272 424 gprAVID--YS-KADAWAVGAIAYEIFGL---------VN-PFYGQGKahlesRSYQEAQlpalPESVPPDVRQLVRALL 490
Cdd:cd05106 285 ---SIFDcvYTvQSDVWSYGILLWEIFSLgkspypgilVNsKFYKMVK-----RGYQMSR----PDFAPPEIYSIMKMCW 352

                ....*....
gi 14165272 491 QREASKRPS 499
Cdd:cd05106 353 NLEPTERPT 361
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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