|
Name |
Accession |
Description |
Interval |
E-value |
| SE |
pfam08491 |
Squalene epoxidase; This domain is found in squalene epoxidase (SE) and related proteins which ... |
277-548 |
2.28e-155 |
|
Squalene epoxidase; This domain is found in squalene epoxidase (SE) and related proteins which are found in taxonomically diverse groups of eukaryotes and also in bacteria. SE was first cloned from Saccharomyces cerevisiae where it was named ERG1. It contains a putative FAD binding site and is a key enzyme in the sterol biosynthetic pathway. Putative transmembrane regions are found to the protein's C-terminus.
Pssm-ID: 400679 Cd Length: 276 Bit Score: 445.62 E-value: 2.28e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 277 HAPLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRGE-MPR- 354
Cdd:pfam08491 1 FAPLTIVCDGCFSKFRKSLSDNKPEVGSYFVGLILKNADLPAPNHGHVILGKPSPVLLYQISSTETRILCDYPGPkLPSi 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 355 ---NLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLW 431
Cdd:pfam08491 81 angELKEYLKKSVAPQIPKELRPSFLAALEEGKIRSMPNSFLPASKNRKKGLILLGDALNMRHPLTGGGMTVGLNDIVLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 432 RKLLKGIPDLYDDAAIFEAKKSFYWARKTsHSFVVNILAQALYELFSATDDSLHQLRKACFLYFKLGGECVAGPVGLLSV 511
Cdd:pfam08491 161 RKLLGPLRDLSDREKVSKVLKSFHWKRKP-YDAVINTLSIALYSLFAADSDELKALRKGCFDYFKLGGDCVSGPVALLSG 239
|
250 260 270
....*....|....*....|....*....|....*..
gi 62865635 512 LSPNPLVLIGHFFAVAIYAVYFCFKSEPWITKPRALL 548
Cdd:pfam08491 240 LLPRPLLLFGHFFAVALYSIYQNFIPRPILGSPLALL 276
|
|
| PTZ00367 |
PTZ00367 |
squalene epoxidase; Provisional |
123-572 |
9.49e-130 |
|
squalene epoxidase; Provisional
Pssm-ID: 240384 [Multi-domain] Cd Length: 567 Bit Score: 391.14 E-value: 9.49e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 123 DPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLK-EPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVvNGYMIHDQE 201
Cdd:PTZ00367 33 DYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDLFsKPDRIVGELLQPGGVNALKELGMEECAEGIGMPC-FGYVVFDHK 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 202 SKsEVQIPYplsenNQVQSGRAFHHGRFIMSLRKAAMA--EPNAKFIEGVVLQLLEED----DVVMGVQYKDKETGD--- 272
Cdd:PTZ00367 112 GK-QVKLPY-----GAGASGVSFHFGDFVQNLRSHVFHncQDNVTMLEGTVNSLLEEGpgfsERAYGVEYTEAEKYDvpe 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 273 -----------------IKELHAPLTVVADGLFSKFRKSLVSNKVSVS--SHFVGFLMKNAPQFKANHAELILANPSPVL 333
Cdd:PTZ00367 186 npfredppsanpsattvRKVATAPLVVMCDGGMSKFKSRYQHYTPASEnhSHFVGLVLKNVRLPKEQHGTVFLGKTGPIL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 334 IYQISSSETRVLVDIRGEMPRNLRE---YMVEKIYPQIPDHLKEPFLEAT-DNSHLRSMPASFLPPSSVKKRGVLLLGDA 409
Cdd:PTZ00367 266 SYRLDDNELRVLVDYNKPTLPSLEEqseWLIEDVAPHLPENMRESFIRASkDTKRIRSMPNARYPPAFPSIKGYVGIGDH 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 410 YNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYD---------DAAIFEAKKSFYWARKTsHSFVVNILAQALYELFSAT 480
Cdd:PTZ00367 346 ANQRHPLTGGGMTCCFSDCIRLAKSLTGIKSLRSidqnemaeiEDAIQAAILSYARNRKT-HASTINILSWALYSVFSSP 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 481 ddslhQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAV--------------------YFCFKSEPW 540
Cdd:PTZ00367 425 -----ALRDACLDYFSLGGECVTGPMSLLSGLDPSPGGLLFHYFSVALYGVlnlimetgaysifgkqlssfEKLTNVASF 499
|
490 500 510
....*....|....*....|....*....|..
gi 62865635 541 ITKPRALLSSGAVLYKACSVIFPLIYSEMKYM 572
Cdd:PTZ00367 500 FVDPERIKHALYLLGAATTIAAPLAKSEFVSL 531
|
|
| PLN02985 |
PLN02985 |
squalene monooxygenase |
125-531 |
7.57e-106 |
|
squalene monooxygenase
Pssm-ID: 178566 [Multi-domain] Cd Length: 514 Bit Score: 328.01 E-value: 7.57e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHdqESKS 204
Cdd:PLN02985 45 DVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERMMGEFMQPGGRFMLSKLGLEDCLEGIDAQKATGMAVY--KDGK 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 205 EVQIPYPLSENN--QVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKELhAPLTV 282
Cdd:PLN02985 123 EAVAPFPVDNNNfpYEPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTAL-APLTV 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 283 VADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDI---------RGEMP 353
Cdd:PLN02985 202 VCDGCYSNLRRSLNDNNAEVLSYQVGYISKNCRLEEPEKLHLIMSKPSFTMLYQISSTDVRCVFEVlpdnipsiaNGEMS 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 354 rnlrEYMVEKIYPQIPDHLKEPFLEATDN-SHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWR 432
Cdd:PLN02985 282 ----TFVKNTIAPQVPPKLRKIFLKGIDEgAHIKVVPTKRMSATLSDKKGVIVLGDAFNMRHPAIASGMMVLLSDILILR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 433 KLLKGIPDLYDDAAIFEAKKSFYWARKtSHSFVVNILAQALYE-LFSATDDSLHQLRKACFLYFKLGGECVAGPVGLLSV 511
Cdd:PLN02985 358 RLLQPLSNLGNANKVSEVIKSFYDIRK-PMSATVNTLGNAFSQvLVASTDEAKEAMRQGCYDYLCSGGFRTSGMMALLGG 436
|
410 420
....*....|....*....|
gi 62865635 512 LSPNPLVLIGHFFAVAIYAV 531
Cdd:PLN02985 437 MNPRPLSLIYHLCAITLSSI 456
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
121-490 |
9.26e-23 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 99.24 E-value: 9.26e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 121 QNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLdAQVVNGYMIHDQ 200
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLAR-GAPIRGIRVRDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 201 ESKSEV-QIPYPLSennQVQSGRAFHHGRFIMSLRKAAmAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETgdikeLHAP 279
Cdd:COG0654 80 SDGRVLaRFDAAET---GLPAGLVVPRADLERALLEAA-RALGVELRFGTEVTGLEQDADGVTVTLADGRT-----LRAD 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 280 LTVVADGLFSKFRKSLvsnkvsvsshFVGFLMKNAPQfkanhaelilanpspvliyqissseTRVLVDIRGEmprnlrey 359
Cdd:COG0654 151 LVVGADGARSAVRRLL----------GIGFTGRDYPQ-------------------------RALWAGVRTE-------- 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 360 mVEKIYPQIPDHLKEpFLEATDNSHLrsmPASFLPPSSVKKRGVLLLGDA-YNMrHPLTGGGMTVAFKDIK-LWRKLLKG 437
Cdd:COG0654 188 -LRARLAAAGPRLGE-LLELSPRSAF---PLRRRRAERWRRGRVVLLGDAaHTM-HPLGGQGANLALRDAAaLAWKLAAA 261
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 62865635 438 IPDLYDDAAI--FEAkksfywARKTSHSFVVNiLAQALYELFSATDDSLHQLRKA 490
Cdd:COG0654 262 LRGRDDEAALarYER------ERRPRAARVQR-AADALGRLFHPDSPPLRLLRNA 309
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
131-426 |
2.39e-17 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 82.32 E-value: 2.39e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 131 AGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEgldaQVVNGYMIHDQeSKSEVQIPY 210
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLDEPLE----RPVRGARFYSP-GGKSVELPP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 211 PLSENNQVQsgRAfhhgRFIMSLRKAAmAEPNAKFIEGV-VLQLLEEDDVVMgVqykdkETGDIKELHAPLTVVADGLFS 289
Cdd:COG0644 76 GRGGGYVVD--RA----RFDRWLAEQA-EEAGAEVRTGTrVTDVLRDDGRVV-V-----RTGDGEEIRADYVVDADGARS 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 290 KFRKSLVSNKVSVSSHFVGFLMKnapqfkanhaelilanpspvliyqissseTRVLVDIRGEMPRNLREYMVEKIYPQ-- 367
Cdd:COG0644 143 LLARKLGLKRRSDEPQDYALAIK-----------------------------EHWELPPLEGVDPGAVEFFFGEGAPGgy 193
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 62865635 368 ---IPdhlkepfleATDNSHLRSMPASFLPPSSVkKRGVLLLGDAYNMRHPLTGGGMTVAFK 426
Cdd:COG0644 194 gwvFP---------LGDGRVSVGIPLGGPRPRLV-GDGVLLVGDAAGFVDPLTGEGIHLAMK 245
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
122-427 |
3.79e-15 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 77.25 E-value: 3.79e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 122 NDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGY-MIHDQ 200
Cdd:PRK07045 4 NPVDVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFAAGGLRRDAMrLYHDK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 201 EsksevqipyPL-SENNQVQSGRAFhhgrFIM----SLRKAAMA----EPNAKFIEGVVLQLLE--EDDVVMGVQYKDKE 269
Cdd:PRK07045 84 E---------LIaSLDYRSASALGY----FILipceQLRRLLLAkldgLPNVRLRFETSIERIErdADGTVTSVTLSDGE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 270 TgdikelHAPLTVV-ADGLFSKFRKSLV---SNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVL 345
Cdd:PRK07045 151 R------VAPTVLVgADGARSMIRDDVLrmpAERVPYATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATRLV 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 346 V-----DIRGEMPRNLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGG 420
Cdd:PRK07045 225 VsfpadEMQGYLADTTRTKLLARLNEFVGDESADAMAAIGAGTAFPLIPLGRMNLDRYHKRNVVLLGDAAHSIHPITGQG 304
|
....*..
gi 62865635 421 MTVAFKD 427
Cdd:PRK07045 305 MNLAIED 311
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
125-294 |
9.85e-13 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 70.27 E-value: 9.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIE------RDLKepdrivGEFLQPGGYHVLKDLGLGDTVEGLDaqvvngymiH 198
Cdd:PRK06185 8 DCCIVGGGPAGMMLGLLLARAGVDVTVLEkhadflRDFR------GDTVHPSTLELMDELGLLERFLELP---------H 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 199 DQESKSEVQIPyplseNNQVQS---GRAFHHGRFIM---------SLRKAAMAEPNAKFIEGV-VLQLLEEDDVVMGVQY 265
Cdd:PRK06185 73 QKVRTLRFEIG-----GRTVTLadfSRLPTPYPYIAmmpqwdfldFLAEEASAYPNFTLRMGAeVTGLIEEGGRVTGVRA 147
|
170 180
....*....|....*....|....*....
gi 62865635 266 KDKEtGDIkELHAPLTVVADGLFSKFRKS 294
Cdd:PRK06185 148 RTPD-GPG-EIRADLVVGADGRHSRVRAL 174
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
120-307 |
7.47e-12 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 67.37 E-value: 7.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 120 SQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIErdlkEPDRIvGEF-----LQPGGYHVLKDLGLGDTVEGLdaQVVNG 194
Cdd:PRK08163 1 MTKVTPVLIVGGGIGGLAAALALARQGIKVKLLE----QAAEI-GEIgagiqLGPNAFSALDALGVGEAARQR--AVFTD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 195 YMI-HDQESKSEV-QIPyplsennqvqSGRAF-----------HHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDD--V 259
Cdd:PRK08163 74 HLTmMDAVDAEEVvRIP----------TGQAFrarfgnpyaviHRADIHLSLLEAVLDHPLVEFRTSTHVVGIEQDGdgV 143
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 62865635 260 VMGVQYKDKETGDIkelhaplTVVADGLFSKFRKSLVSNKVSVSSHFV 307
Cdd:PRK08163 144 TVFDQQGNRWTGDA-------LIGCDGVKSVVRQSLVGDAPRVTGHVV 184
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
123-427 |
4.36e-11 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 64.65 E-value: 4.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 123 DPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDlkePDRIV---GEFLQPGGYHVLKDLGLGDTVegLDAQVVNGYMIHd 199
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERH---ATTSVlprAHGLNQRTMELLRQAGLEDRI--LAEGVPHEGMGL- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 200 qesksEVQIPYPLSENNQVQSGRAFH---HGRFIMSLRKAAMAEPnAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKEL 276
Cdd:pfam01494 75 -----AFYNTRRRADLDFLTSPPRVTvypQTELEPILVEHAEARG-AQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 277 HAPLTVVADGLFSKFRKSL---VSNKVSVSSHFVG--FLMKNAPQFKANHA--ELILANPSPVLIYQISSSETR---VLV 346
Cdd:pfam01494 149 RAKYLVGCDGGRSPVRKTLgieFEGFEGVPFGSLDvlFDAPDLSDPVERAFvhYLIYAPHSRGFMVGPWRSAGReryYVQ 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 347 DIRGEMPRNLREymvekiyPQIPDHLKEPFLEAT--DNSHLRSMPASFLPpssVKKR--------GVLLLGDAYNmRHPL 416
Cdd:pfam01494 229 VPWDEEVEERPE-------EFTDEELKQRLRSIVgiDLALVEILWKSIWG---VASRvatryrkgRVFLAGDAAH-IHPP 297
|
330
....*....|..
gi 62865635 417 TGG-GMTVAFKD 427
Cdd:pfam01494 298 TGGqGLNTAIQD 309
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
126-155 |
2.61e-06 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 49.90 E-value: 2.61e-06
10 20 30
....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERD 155
Cdd:COG0665 5 VVVIGGGIAGLSTAYHLARRGLDVTVLERG 34
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
126-295 |
2.74e-06 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 49.94 E-value: 2.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERD----LKEPD---RIVGefLQPGGYHVLKDLGLGDTVEG------LDAQVV 192
Cdd:PRK09126 6 IVVVGAGPAGLSFARSLAGSGLKVTLIERQplaaLADPAfdgREIA--LTHASREILQRLGAWDRIPEdeisplRDAKVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 193 NG---YMIH-DQESKSEVQIPYpLSENNQVQsgRAfhhgrfimsLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDK 268
Cdd:PRK09126 84 NGrspFALTfDARGRGADALGY-LVPNHLIR--RA---------AYEAVSQQDGIELLTGTRVTAVRTDDDGAQVTLANG 151
|
170 180
....*....|....*....|....*..
gi 62865635 269 ETgdikeLHAPLTVVADGLFSKFRKSL 295
Cdd:PRK09126 152 RR-----LTARLLVAADSRFSATRRQL 173
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
126-421 |
4.34e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 49.10 E-value: 4.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTV-------EGLDAQVVNGYMIH 198
Cdd:PRK06847 7 VLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRVYGAGITLQGNALRALRELGVLDECleagfgfDGVDLFDPDGTLLA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 199 DQESKSEVQIPYPlsenNQVQSGR-AFHHgrfImsLRKAAMAEpNAKFIEGVVLQLLEEDDVVMGVQYKDKETGdikelH 277
Cdd:PRK06847 87 ELPTPRLAGDDLP----GGGGIMRpALAR---I--LADAARAA-GADVRLGTTVTAIEQDDDGVTVTFSDGTTG-----R 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 278 APLTVVADGLFSKFRKSLVSNK--------------VSVSSHFVGFLMKNAPQFKANhaelilANP-SPVLIYQ--ISSS 340
Cdd:PRK06847 152 YDLVVGADGLYSKVRSLVFPDEpepeytgqgvwravLPRPAEVDRSLMYLGPTTKAG------VVPlSEDLMYLfvTEPR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 341 ETRVLVDiRGEMPRNLREYMVEKIYPQIPDhLKEPfleATDNSHL--RSMPASFLPPSSVKKRgVLLLGDAYnmrHPLT- 417
Cdd:PRK06847 226 PDNPRIE-PDTLAALLRELLAPFGGPVLQE-LREQ---ITDDAQVvyRPLETLLVPAPWHRGR-VVLIGDAA---HATTp 296
|
....*...
gi 62865635 418 ----GGGM 421
Cdd:PRK06847 297 hlaqGAGM 304
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
125-291 |
5.35e-06 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 48.55 E-value: 5.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERD----------------------------------------LKEPDRIVG 164
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGddpgsgasgrnaglihpglrylepselarlalealdlweeLEEELGIDC 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 165 EFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIH--DQESKSEVqipYPLSENNQ----VQSGRAFHHGRFIMSLRKAAM 238
Cdd:pfam01266 81 GFRRCGVLVLARDEEEEALEKLLAALRRLGVPAEllDAEELREL---EPLLPGLRgglfYPDGGHVDPARLLRALARAAE 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 62865635 239 AEpNAKFIEGVVLQLLEEDDVVMGVQykdkETGDIKELhapltVVADGLFSKF 291
Cdd:pfam01266 158 AL-GVRIIEGTEVTGIEEEGGVWGVV----TTGEADAV-----VNAAGAWADL 200
|
|
| TrkA |
COG0569 |
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ... |
126-183 |
6.91e-06 |
|
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440335 [Multi-domain] Cd Length: 296 Bit Score: 48.14 E-value: 6.91e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkePDRIvgEFLQPGGYHV----------LKDLGLGDT 183
Cdd:COG0569 98 VIIIGAGRVGRSLARELEEEGHDVVVIDKD---PERV--ERLAEEDVLVivgdatdeevLEEAGIEDA 160
|
|
| COQ6 |
TIGR01989 |
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ... |
125-488 |
1.78e-05 |
|
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Pssm-ID: 273914 [Multi-domain] Cd Length: 437 Bit Score: 47.44 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 125 EVIIVGAGVLGSALAAVLSRD----GRKVTVIERDlKEPDRIVGEFLQPGGY-------------HVLKDLGLGDTVEGL 187
Cdd:TIGR01989 2 DVVIVGGGPVGLALAAALGNNpltkDLKVLLLDAV-DNPKLKSRNYEKPDGPysnrvssitpasiSFFKKIGAWDHIQSD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 188 DAQVVNGYMIHDQESKSEVQipyplsennqvqsgraFHHGRFimslrkaamAEPNAKFIEGVVLQ------LLEEDDVVM 261
Cdd:TIGR01989 81 RIQPFGRMQVWDGCSLALIR----------------FDRDNG---------KEDMACIIENDNIQnslynrLQEYNGDNV 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 262 GVQYKDK--------------------ETGDIKELHAPLTVVADGLFSKFRKSlvSNKVSVS-----SHFVGFLMKNAPQ 316
Cdd:TIGR01989 136 KILNPARlisvtipskypndnsnwvhiTLSDGQVLYTKLLIGADGSNSNVRKA--ANIDTTGwnynqHAVVATLKLEEAT 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 317 FKA------------------------------NHAELILANPSPVLIYQISSSetrvLVDIRGEMPR-NLREYMVEKIY 365
Cdd:TIGR01989 214 ENDvawqrflptgpiallplpdnnstlvwstspEEALRLLSLPPEDFVDALNAA----FDLGYSDHPYsYLLDYAMEKLN 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 366 PQIPdHLKE---------PFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIK-LWRKLL 435
Cdd:TIGR01989 290 EDIG-FRTEgskscfqvpPRVIGVVDKSRAAFPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVAsLVKALA 368
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 62865635 436 KGIPDLYDDAAIFEAKKsfYWARKTSHSFVVNILAQALYELFSATDDSLHQLR 488
Cdd:TIGR01989 369 EAVSVGADIGSISSLKP--YERERYAKNVVLLGLVDKLHKLYATDFPPVVALR 419
|
|
| trkA |
PRK09496 |
Trk system potassium transporter TrkA; |
126-194 |
2.74e-05 |
|
Trk system potassium transporter TrkA;
Pssm-ID: 236541 [Multi-domain] Cd Length: 453 Bit Score: 46.65 E-value: 2.74e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkePDRIvgEFLQpggyhvlkdlglgdtvEGLDAQVVNG 194
Cdd:PRK09496 3 IIIVGAGQVGYTLAENLSGENNDVTVIDTD---EERL--RRLQ----------------DRLDVRTVVG 50
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
120-160 |
3.62e-05 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 46.29 E-value: 3.62e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 62865635 120 SQNDPEVIIVGAGVLGSALAAVLSR-DGRKVTVIErdlKEPD 160
Cdd:COG0579 1 MMEMYDVVIIGAGIVGLALARELSRyEDLKVLVLE---KEDD 39
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
126-308 |
6.49e-05 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 45.50 E-value: 6.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIER--DLKEPDRIVgEFLQPgGYHVLKDLGLGDTVEGLDAQVVNgymIHDQESK 203
Cdd:PRK07588 3 VAISGAGIAGPTLAYWLRRYGHEPTLIERapELRTGGYMV-DFWGV-GYEVAKRMGITDQLREAGYQIEH---VRSVDPT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 204 SEVqipyplSENNQVQSGRAFHHGRFImSLRKAAMAEPNAKFIEGVVLQLL---------EEDDVVMGVQYKDKETGDik 274
Cdd:PRK07588 78 GRR------KADLNVDSFRRMVGDDFT-SLPRGDLAAAIYTAIDGQVETIFddsiatideHRDGVRVTFERGTPRDFD-- 148
|
170 180 190
....*....|....*....|....*....|....
gi 62865635 275 elhapLTVVADGLFSKFRkSLVSNKVSVSSHFVG 308
Cdd:PRK07588 149 -----LVIGADGLHSHVR-RLVFGPERDFEHYLG 176
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
126-190 |
9.42e-05 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 44.80 E-value: 9.42e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERD---LKEPDRIVGEFLQpggyHVLKDLG----LGDTVEGLDAQ 190
Cdd:COG0446 127 AVVIGGGPIGLELAEALRKRGLKVTLVERAprlLGVLDPEMAALLE----EELREHGvelrLGETVVAIDGD 194
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
128-194 |
9.76e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 44.88 E-value: 9.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 128 IVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRIVG-----EFlqpGG------YH-----------VLKDLGLGDTV- 184
Cdd:PRK07233 4 IVGGGIAGLAAAYRLAKRGHEVTVFEAD----DQLGGlaasfEF---GGlpierfYHhifksdealleLLDELGLEDKLr 76
|
90
....*....|..
gi 62865635 185 --EGLDAQVVNG 194
Cdd:PRK07233 77 wrETKTGYYVDG 88
|
|
| PRK06184 |
PRK06184 |
hypothetical protein; Provisional |
121-213 |
1.27e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235728 [Multi-domain] Cd Length: 502 Bit Score: 44.59 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 121 QNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERdLKEP---DRivGEFLQPGGYHVLKDLGLGDTVEGL---------- 187
Cdd:PRK06184 1 YTTTDVLIVGAGPTGLTLAIELARRGVSFRLIEK-APEPfpgSR--GKGIQPRTQEVFDDLGVLDRVVAAgglyppmriy 77
|
90 100
....*....|....*....|....*...
gi 62865635 188 --DAQVVNGYMIHDQESKSEvqIPYPLS 213
Cdd:PRK06184 78 rdDGSVAESDMFAHLEPTPD--EPYPLP 103
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
128-154 |
1.41e-04 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 40.21 E-value: 1.41e-04
10 20
....*....|....*....|....*..
gi 62865635 128 IVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEK 27
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
126-168 |
2.00e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 40.27 E-value: 2.00e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIER---DLKEPDRIVGEFLQ 168
Cdd:pfam00070 2 VVVVGGGYIGLELAGALARLGSKVTVVERrdrLLPGFDPEIAKILQ 47
|
|
| ubiF |
PRK08020 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed |
120-293 |
2.02e-04 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Pssm-ID: 181199 [Multi-domain] Cd Length: 391 Bit Score: 43.82 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 120 SQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDL-------KEPD-RIVGefLQPGGYHVLKDLGLGDTVEGL---- 187
Cdd:PRK08020 2 TNQPTDIAIVGGGMVGAALALGLAQHGFSVAVLEHAApapfdadSQPDvRISA--ISAASVALLKGLGVWDAVQAMrshp 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 188 ----------DAQVVN----------GYMIhdqesksevqipyplsENNQVQsgrafhhgrfiMSLRKAAMAEPNAKFIE 247
Cdd:PRK08020 80 yrrletweweTAHVVFdaaelklpelGYMV----------------ENRVLQ-----------LALWQALEAHPNVTLRC 132
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 62865635 248 GVVLQLLEEDDVVMGVQYKDKEtgdikELHAPLTVVADGLFSKFRK 293
Cdd:PRK08020 133 PASLQALQRDDDGWELTLADGE-----EIQAKLVIGADGANSQVRQ 173
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
125-155 |
2.31e-04 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 44.07 E-value: 2.31e-04
10 20 30
....*....|....*....|....*....|.
gi 62865635 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERD 155
Cdd:PRK01747 262 DAAIIGGGIAGAALALALARRGWQVTLYEAD 292
|
|
| TrkA_N |
pfam02254 |
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include ... |
126-175 |
2.36e-04 |
|
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Pssm-ID: 426679 [Multi-domain] Cd Length: 115 Bit Score: 40.97 E-value: 2.36e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGrKVTVIERDlkePDRIvgEFLQPGGYHVL 175
Cdd:pfam02254 1 IIIIGYGRVGRSLAEELSEGG-DVVVIDKD---EERV--EELREEGVPVV 44
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
116-295 |
2.50e-04 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 43.74 E-value: 2.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 116 TSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRIVGeflQPGGYH-------VLKDLGLGDTVeGLD 188
Cdd:PRK06183 3 AQHPDAHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERW----PTLYD---LPRAVGiddealrVLQAIGLADEV-LPH 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 189 AQVVNGYMIHDQESKSEVQIPYPlsennqvqSGRafHHG---RFIMS-------LRKAAMAEPNAKFIEGV-VLQLLEED 257
Cdd:PRK06183 75 TTPNHGMRFLDAKGRCLAEIARP--------STG--EFGwprRNAFHqplleavLRAGLARFPHVRVRFGHeVTALTQDD 144
|
170 180 190
....*....|....*....|....*....|....*...
gi 62865635 258 DVVMgVQYKDkETGDIKELHAPLTVVADGLFSKFRKSL 295
Cdd:PRK06183 145 DGVT-VTLTD-ADGQRETVRARYVVGCDGANSFVRRTL 180
|
|
| PRK07538 |
PRK07538 |
hypothetical protein; Provisional |
126-295 |
4.46e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 236046 [Multi-domain] Cd Length: 413 Bit Score: 42.96 E-value: 4.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIE--RDLKEPDriVGEFLQPGGYHVLKDLGLGDTvegLDAQVVNGYMI-----H 198
Cdd:PRK07538 3 VLIAGGGIGGLTLALTLHQRGIEVVVFEaaPELRPLG--VGINLLPHAVRELAELGLLDA---LDAIGIRTRELayfnrH 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 199 DQESKSE---VQIPYPLSennQVqsgrAFHHGRFIMSLRKAAMAEPNAKFIE---GVVLQLLEEDDVVMGVQykDKETGD 272
Cdd:PRK07538 78 GQRIWSEprgLAAGYDWP---QY----SIHRGELQMLLLDAVRERLGPDAVRtghRVVGFEQDADVTVVFLG--DRAGGD 148
|
170 180
....*....|....*....|...
gi 62865635 273 IKELHAPLTVVADGLFSKFRKSL 295
Cdd:PRK07538 149 LVSVRGDVLIGADGIHSAVRAQL 171
|
|
| PRK08277 |
PRK08277 |
D-mannonate oxidoreductase; Provisional |
126-171 |
5.01e-04 |
|
D-mannonate oxidoreductase; Provisional
Pssm-ID: 236216 [Multi-domain] Cd Length: 278 Bit Score: 42.19 E-value: 5.01e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGG 171
Cdd:PRK08277 14 VITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG 59
|
|
| PRK10157 |
PRK10157 |
putative oxidoreductase FixC; Provisional |
125-308 |
5.77e-04 |
|
putative oxidoreductase FixC; Provisional
Pssm-ID: 182273 [Multi-domain] Cd Length: 428 Bit Score: 42.59 E-value: 5.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIV--GEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIhdqeS 202
Cdd:PRK10157 7 DAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVtgGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMT----E 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 203 KSEVQIPYpLSENNQVQSGRAFH--HGRFIMSLRKAAmAEPNAKFIEGV-VLQLLEEDDVVMGVQykdkETGDIKElhAP 279
Cdd:PRK10157 83 KSAMTMDY-CNGDETSPSQRSYSvlRSKFDAWLMEQA-EEAGAQLITGIrVDNLVQRDGKVVGVE----ADGDVIE--AK 154
|
170 180 190
....*....|....*....|....*....|
gi 62865635 280 LTVVADGLFSKFRKSL-VSNKVSVSSHFVG 308
Cdd:PRK10157 155 TVILADGVNSILAEKLgMAKRVKPTDVAVG 184
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
126-179 |
6.63e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 41.92 E-value: 6.63e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIE---RDLKEPDRIVGEFLQpggyHVLKDLG 179
Cdd:pfam07992 155 VVVVGGGYIGVELAAALAKLGKEVTLIEaldRLLRAFDEEISAALE----KALEKNG 207
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
126-154 |
7.39e-04 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 42.51 E-value: 7.39e-04
10 20 30
....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRD-GRKVTVIER 154
Cdd:COG2303 7 YVIVGAGSAGCVLANRLSEDaGLRVLLLEA 36
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
126-154 |
1.08e-03 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 41.76 E-value: 1.08e-03
10 20
....*....|....*....|....*....
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:COG1233 6 VVVIGAGIGGLAAAALLARAGYRVTVLEK 34
|
|
| Kch |
COG1226 |
Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism]; |
126-175 |
1.15e-03 |
|
Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism];
Pssm-ID: 440839 [Multi-domain] Cd Length: 279 Bit Score: 41.25 E-value: 1.15e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkePDRIvgEFLQPGGYHVL 175
Cdd:COG1226 127 VIIAGFGRVGQIVARLLRAEGIPFVVIDLD---PERV--EELRRFGIKVY 171
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
126-188 |
1.18e-03 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 41.67 E-value: 1.18e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRI--------VGEFLQpggyHVLKDLG----LGDTVEGLD 188
Cdd:COG1251 145 VVVIGGGLIGLEAAAALRKRGLEVTVVERA----PRLlprqldeeAGALLQ----RLLEALGvevrLGTGVTEIE 211
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
125-154 |
1.26e-03 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 41.32 E-value: 1.26e-03
10 20 30
....*....|....*....|....*....|
gi 62865635 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:PRK00711 2 RVVVLGSGVIGVTSAWYLAQAGHEVTVIDR 31
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
124-166 |
1.43e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 41.32 E-value: 1.43e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 62865635 124 PE-VIIVGAGVLGSALAAVLSRDGRKVTVIERdlkePDRIVGEF 166
Cdd:PRK06292 169 PKsLAVIGGGVIGLELGQALSRLGVKVTVFER----GDRILPLE 208
|
|
| PanE |
COG1893 |
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of ... |
128-184 |
2.07e-03 |
|
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of the Pathway/BioSystem: Pantothenate/CoA biosynthesis
Pssm-ID: 441497 [Multi-domain] Cd Length: 305 Bit Score: 40.61 E-value: 2.07e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 62865635 128 IVGAGVLGSALAAVLSRDGRKVTVIERdlkePDRIvgEFLQPGGYHVLKDLGLGDTV 184
Cdd:COG1893 5 ILGAGAIGGLLGARLARAGHDVTLVAR----GAHA--EALRENGLRLESPDGDRTTV 55
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
124-166 |
2.57e-03 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 40.46 E-value: 2.57e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 62865635 124 PE-VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRIVGEF 166
Cdd:COG1249 168 PKsLVVIGGGYIGLEFAQIFARLGSEVTLVERG----DRLLPGE 207
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
120-155 |
2.90e-03 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 40.55 E-value: 2.90e-03
10 20 30
....*....|....*....|....*....|....*.
gi 62865635 120 SQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERD 155
Cdd:COG3573 2 AAMDADVIVVGAGLAGLVAAAELADAGRRVLLLDQE 37
|
|
| PRK07333 |
PRK07333 |
ubiquinone biosynthesis hydroxylase; |
126-293 |
4.51e-03 |
|
ubiquinone biosynthesis hydroxylase;
Pssm-ID: 180935 [Multi-domain] Cd Length: 403 Bit Score: 39.58 E-value: 4.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLsRDGR---KVTVIERDLKEP--DRIVGEFLQPGGYHVLKDLGLGDTVEGlDAQVVNGYMIHDQ 200
Cdd:PRK07333 4 VVIAGGGYVGLALAVAL-KQAAphlPVTVVDAAPAGAwsRDPRASAIAAAARRMLEALGVWDEIAP-EAQPITDMVITDS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 201 ESKSEVQiPYPLSENNQVQSGRAFHH----GRFIMSLRKAAMAEpNAKFIEGVVLQLLEEDDVVMGVQYKDKETgdikeL 276
Cdd:PRK07333 82 RTSDPVR-PVFLTFEGEVEPGEPFAHmvenRVLINALRKRAEAL-GIDLREATSVTDFETRDEGVTVTLSDGSV-----L 154
|
170
....*....|....*..
gi 62865635 277 HAPLTVVADGLFSKFRK 293
Cdd:PRK07333 155 EARLLVAADGARSKLRE 171
|
|
| Thi4 |
pfam01946 |
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme. |
125-263 |
4.62e-03 |
|
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
Pssm-ID: 460393 Cd Length: 232 Bit Score: 38.99 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 125 EVIIVGAGVLGSALAAVLSRD-GRKVTVIERDLkepdrivgeflQPGGyhvlkdlGLGdtvegLDAQVVNgYMIHDQESK 203
Cdd:pfam01946 19 DVVIVGAGSSGLTAAYYLAKNrGLKVAIIERSV-----------SPGG-------GAW-----LGGQLFS-AMVVRKPAH 74
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 62865635 204 ---SEVQIPYPLSENNQVQSgrafHHGRFIMSLRKAAMAEPNAKFIEGVVLQ--LLEEDDVVMGV 263
Cdd:pfam01946 75 lflDEFGIPYEDEGDYVVVK----HAALFTSTLMSKALQLPNVKLFNATSVEdlIVRPGVGVAGV 135
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
116-153 |
4.65e-03 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 39.62 E-value: 4.65e-03
10 20 30
....*....|....*....|....*....|....*...
gi 62865635 116 TSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIE 153
Cdd:PRK07364 11 LPSTRSLTYDVAIVGGGIVGLTLAAALKDSGLRIALIE 48
|
|
| PRK08850 |
PRK08850 |
2-octaprenyl-6-methoxyphenol hydroxylase; Validated |
125-295 |
5.19e-03 |
|
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Pssm-ID: 236341 [Multi-domain] Cd Length: 405 Bit Score: 39.37 E-value: 5.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKE------PDRIVGEfLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIH 198
Cdd:PRK08850 6 DVAIIGGGMVGLALAAALKESDLRIAVIEGQLPEealnelPDVRVSA-LSRSSEHILRNLGAWQGIEARRAAPYIAMEVW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62865635 199 DQESksevqipyplsennqvqsgraFHHGRFimslRKAAMAEPN-AKFIEGVVLQL------LEEDDVVM-------GVQ 264
Cdd:PRK08850 85 EQDS---------------------FARIEF----DAESMAQPDlGHIVENRVIQLalleqvQKQDNVTLlmparcqSIA 139
|
170 180 190
....*....|....*....|....*....|....*
gi 62865635 265 YKDKET----GDIKELHAPLTVVADGLFSKFRKSL 295
Cdd:PRK08850 140 VGESEAwltlDNGQALTAKLVVGADGANSWLRRQM 174
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
124-154 |
5.21e-03 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 39.09 E-value: 5.21e-03
10 20 30
....*....|....*....|....*....|.
gi 62865635 124 PEVIIVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:COG3380 4 PDIAIIGAGIAGLAAARALQDAGHEVTVFEK 34
|
|
| PRK07688 |
PRK07688 |
thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated |
122-155 |
5.30e-03 |
|
thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Pssm-ID: 181084 [Multi-domain] Cd Length: 339 Bit Score: 39.21 E-value: 5.30e-03
10 20 30
....*....|....*....|....*....|....*
gi 62865635 122 NDPEVIIVGAGVLGSALAAVLSRDG-RKVTVIERD 155
Cdd:PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGvGKVTIVDRD 57
|
|
| Sacchrp_dh_NADP |
pfam03435 |
Saccharopine dehydrogenase NADP binding domain; This family contains the NADP binding domain ... |
126-163 |
5.47e-03 |
|
Saccharopine dehydrogenase NADP binding domain; This family contains the NADP binding domain of saccharopine dehydrogenase. In some organizms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase.
Pssm-ID: 397480 [Multi-domain] Cd Length: 120 Bit Score: 37.18 E-value: 5.47e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 62865635 126 VIIVGAGVLGSALAAVLSRDG--RKVTVIERDLKEPDRIV 163
Cdd:pfam03435 1 VLIIGAGSVGQGVAPLLARHFdvDRITVADRTLEKAQALA 40
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
127-156 |
6.59e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 39.03 E-value: 6.59e-03
10 20 30
....*....|....*....|....*....|
gi 62865635 127 IIVGAGVLGSALAAVLSRDGRKVTVIERDL 156
Cdd:PRK06370 9 IVIGAGQAGPPLAARAAGLGMKVALIERGL 38
|
|
| PRK09754 |
PRK09754 |
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional |
95-153 |
6.69e-03 |
|
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Pssm-ID: 170080 [Multi-domain] Cd Length: 396 Bit Score: 39.14 E-value: 6.69e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 62865635 95 ARRRR------KGTNISETSLIGTAACTSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIE 153
Cdd:PRK09754 110 AAARPlplldaLGERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELAASATQRRCKVTVIE 174
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
117-189 |
7.38e-03 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 39.12 E-value: 7.38e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 62865635 117 STSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPgGYHVLKDLGLGDTVEGLDA 189
Cdd:PRK07494 1 SLMEKEHTDIAVIGGGPAGLAAAIALARAGASVALVAPEPPYADLRTTALLGP-SIRFLERLGLWARLAPHAA 72
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
124-182 |
7.60e-03 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 39.05 E-value: 7.60e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 62865635 124 PEVIIVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRI--------VGEFLQPGGYHV-----------LKDLGLGD 182
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEAS----DRVgglirtveVDGFRIDRGPHSfltrdpevlelLRELGLGD 75
|
|
| PRK04965 |
PRK04965 |
NADH:flavorubredoxin reductase NorW; |
126-188 |
7.91e-03 |
|
NADH:flavorubredoxin reductase NorW;
Pssm-ID: 179902 [Multi-domain] Cd Length: 377 Bit Score: 38.74 E-value: 7.91e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 62865635 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLG----LGDTVEGLD 188
Cdd:PRK04965 144 VLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLASLMPPEVSSRLQHRLTEMGvhllLKSQLQGLE 210
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
118-154 |
8.20e-03 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 38.69 E-value: 8.20e-03
10 20 30
....*....|....*....|....*....|....*..
gi 62865635 118 TSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:COG2072 1 TAATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEK 37
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
118-155 |
8.33e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 38.75 E-value: 8.33e-03
10 20 30
....*....|....*....|....*....|....*....
gi 62865635 118 TSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIE-RD 155
Cdd:COG1231 2 SRRARGKDVVIVGAGLAGLAAARELRKAGLDVTVLEaRD 40
|
|
| PRK12475 |
PRK12475 |
thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional |
123-158 |
9.45e-03 |
|
thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Pssm-ID: 183547 [Multi-domain] Cd Length: 338 Bit Score: 38.56 E-value: 9.45e-03
10 20 30
....*....|....*....|....*....|....*..
gi 62865635 123 DPEVIIVGAGVLGSALAAVLSRDG-RKVTVIERDLKE 158
Cdd:PRK12475 24 EKHVLIVGAGALGAANAEALVRAGiGKLTIADRDYVE 60
|
|
| |
