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Conserved domains on  [gi|2064674933|ref|NP_001382381|]
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proline and serine-rich protein 3 isoform 5 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 159-530 6.68e-09

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 59.57  E-value: 6.68e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  159 PDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPltpalRTLTSPAP 238
Cdd:PHA03247  2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG-----RAAQASSP 2679

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  239 VETLSSLGTQPNHVPLwSSVAQPGPPEAFYVERPPfpsvssPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHL 318
Cdd:PHA03247  2680 PQRPRRRAARPTVGSL-TSLADPPPPPPTPEPAPH------ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG 2752

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  319 GStlAPPASLASTLEPPASTPaPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSscaqPKSLGPKSRRSR 398
Cdd:PHA03247  2753 GP--ARPARPPTTAGPPAPAP-PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA----PAAALPPAASPA 2825

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  399 APRPEAAEQVPAAGQGPGPQlrgvlgqvvaarlFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKA 478
Cdd:PHA03247  2826 GPLPPPTSAQPTAPPPPPGP-------------PPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2064674933  479 ESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 530
Cdd:PHA03247  2893 RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLA 2944
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 159-530 6.68e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 59.57  E-value: 6.68e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  159 PDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPltpalRTLTSPAP 238
Cdd:PHA03247  2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG-----RAAQASSP 2679

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  239 VETLSSLGTQPNHVPLwSSVAQPGPPEAFYVERPPfpsvssPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHL 318
Cdd:PHA03247  2680 PQRPRRRAARPTVGSL-TSLADPPPPPPTPEPAPH------ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG 2752

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  319 GStlAPPASLASTLEPPASTPaPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSscaqPKSLGPKSRRSR 398
Cdd:PHA03247  2753 GP--ARPARPPTTAGPPAPAP-PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA----PAAALPPAASPA 2825

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  399 APRPEAAEQVPAAGQGPGPQlrgvlgqvvaarlFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKA 478
Cdd:PHA03247  2826 GPLPPPTSAQPTAPPPPPGP-------------PPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2064674933  479 ESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 530
Cdd:PHA03247  2893 RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLA 2944
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 181-329 8.80e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 39.25  E-value: 8.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 181 PTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRtltspAPVETLsslgTQPNHVPLWSSVAQ 260
Cdd:pfam09770 210 PAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQPQQPQQHPGQG-----HPVTIL----QRPQSPQPDPAQPS 280

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2064674933 261 PGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQA----STLAHLGSTLAPPASLA 329
Cdd:pfam09770 281 IQPQAQQFHQQPPPVPVQPTQILQNPNRLSAARVGYPQNPQPGVQPAPAHQAhrqqGSFGRQAPIITHPQQLA 353
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 159-530 6.68e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 59.57  E-value: 6.68e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  159 PDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPltpalRTLTSPAP 238
Cdd:PHA03247  2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG-----RAAQASSP 2679

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  239 VETLSSLGTQPNHVPLwSSVAQPGPPEAFYVERPPfpsvssPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHL 318
Cdd:PHA03247  2680 PQRPRRRAARPTVGSL-TSLADPPPPPPTPEPAPH------ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG 2752

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  319 GStlAPPASLASTLEPPASTPaPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSscaqPKSLGPKSRRSR 398
Cdd:PHA03247  2753 GP--ARPARPPTTAGPPAPAP-PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA----PAAALPPAASPA 2825

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  399 APRPEAAEQVPAAGQGPGPQlrgvlgqvvaarlFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKA 478
Cdd:PHA03247  2826 GPLPPPTSAQPTAPPPPPGP-------------PPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2064674933  479 ESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 530
Cdd:PHA03247  2893 RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLA 2944
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 307-426 3.10e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 50.10  E-value: 3.10e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 307 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 378
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2064674933 379 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 426
Cdd:PRK14951  446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 PHA03247
large tegument protein UL36; Provisional
 181-530 6.50e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 6.50e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  181 PTPAPAPASSQAPLRPeddilyqwRQRRKLEQAQGSKGDRAWVPPLTPALRTLTSPAPVETLSSLGTQPNHVPLWSSVAQ 260
Cdd:PHA03247  2569 PPPRPAPRPSEPAVTS--------RARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP 2640

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  261 PGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPA 336
Cdd:PHA03247  2641 HPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSAT 2719

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  337 STP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGP 415
Cdd:PHA03247  2720 PLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP 2799

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  416 GPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC-----------RAKAESLKAK 484
Cdd:PHA03247  2800 SPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrrRPPSRSPAAK 2874

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*.
gi 2064674933  485 ALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 530
Cdd:PHA03247  2875 PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 333-427 7.38e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 46.04  E-value: 7.38e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  333 EPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSlgpksrrSRAPRPEAAEQVPAAG 412
Cdd:PRK12270    40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------AAPPAAAAAAAPAAAA 112

                           90
                   ....*....|....*.
gi 2064674933  413 QGPGPQ-LRGVLGQVV 427
Cdd:PRK12270   113 VEDEVTpLRGAAAAVA 128
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
304-516 7.88e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 45.64  E-value: 7.88e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 304 GAVPPTQQASTLAhlgsTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSS 383
Cdd:PRK12323  371 GAGPATAAAAPVA----QPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 384 CAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQAtqpQT 463
Cdd:PRK12323  447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGW---VA 523

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2064674933 464 KVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPA 516
Cdd:PRK12323  524 ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDM 576
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 294-429 1.27e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 45.09  E-value: 1.27e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 294 APQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTlAPPASTPAPLACTPAPPAstlasPAVP 373
Cdd:PRK14951  384 PEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPA-AAPAAAPAAVALAPAPPA-----QAAP 457

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2064674933 374 QGLPIPDPsscAQPKSLGPKSRRSRAPRPEAAEQVPAAgqgPGPQLRGVLGQVVAA 429
Cdd:PRK14951  458 ETVAIPVR---VAPEPAVASAAPAPAAAPAAARLTPTE---EGDVWHATVQQLAAA 507
PHA03247 PHA03247
large tegument protein UL36; Provisional
 147-527 1.51e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 1.51e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  147 SDGLSPFSETFIPDSSKGLGPRAPASPAPAQaqtptPAPAPASSQAPLRPEDDILYQWrQRRKLEQAQGSKGDRAwvPPL 226
Cdd:PHA03247  2484 AEARFPFAAGAAPDPGGGGPPDPDAPPAPSR-----LAPAILPDEPVGEPVHPRMLTW-IRGLEELASDDAGDPP--PPL 2555

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  227 TPALRTLTSPAPVETlSSLGTQPNHVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIFWAPSShgffwAPQSGPWVSLGAV 306
Cdd:PHA03247  2556 PPAAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP-----LPPDTHAPDPPPP 2629

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  307 PPTQQASTLAHLGSTLAPPASLASTLEPP--------ASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPI 378
Cdd:PHA03247  2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPgrvsrprrARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPE 2709

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  379 PDPS--SCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPgpqlrgvlgqvvaarLFPDSLEDTPPHFEGPPPPKAGSPKV 456
Cdd:PHA03247  2710 PAPHalVSATPLPPGPAAARQASPALPAAPAPPAVPAGP---------------ATPGGPARPARPPTTAGPPAPAPPAA 2774

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2064674933  457 QATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPP 527
Cdd:PHA03247  2775 PAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP 2845
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
303-408 2.13e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.38  E-value: 2.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 303 LGAVPPTQQASTLAHLGStlapPASLASTLEPPASTPAPLASTLAPPASTPAPLAcTPAPPASTLASPAVPQGLPIPDPS 382
Cdd:PRK14971  384 TQPAAAPQPSAAAAASPS----PSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAA-VPVNPPSTAPQAVRPAQFKEEKKI 458

                          90       100
                  ....*....|....*....|....*.
gi 2064674933 383 SCAQPKSLGPKSRRsraPRPEAAEQV 408
Cdd:PRK14971  459 PVSKVSSLGPSTLR---PIQEKAEQA 481
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
258-430 7.64e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.56  E-value: 7.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 258 VAQPGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPwvslGAVPPTQQASTLAHLGSTLAPPASLASTLEPPAs 337
Cdd:PRK12323  382 VAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAP----ARRSPAPEALAAARQASARGPGGAPAPAPAPAA- 456

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 338 TPAPLASTLAPPASTPAPLACTPAPPASTLASPA-----------VPQGLPIPDP----SSCAQPKSLGPKSRRSRAPRP 402
Cdd:PRK12323  457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApadddpppweeLPPEFASPAPaqpdAAPAGWVAESIPDPATADPDD 536

                         170       180
                  ....*....|....*....|....*...
gi 2064674933 403 EAAEQVPAAGQGPGPQLRGVLGQVVAAR 430
Cdd:PRK12323  537 AFETLAPAPAAAPAPRAAAATEPVVAPR 564
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 294-429 1.93e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.51  E-value: 1.93e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 294 APQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLAstlePPASTPAPLASTLAPPASTPAPlacTPAPPASTLASPAVP 373
Cdd:PRK07764  380 RLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAA----APAAAAAPAPAAAPQPAPAPAP---APAPPSPAGNAPAGG 452

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 374 QGLPIPDPSSCAQPK---------SLGPKSRRSRAPRPEAAEQVPAA-----GQGPGPQLRGVLGQVVAA 429
Cdd:PRK07764  453 APSPPPAAAPSAQPApapaaapepTAAPAPAPPAAPAPAAAPAAPAApaapaGADDAATLRERWPEILAA 522
PRK11855 PRK11855
dihydrolipoamide acetyltransferase; Reviewed
 319-419 4.33e-03

dihydrolipoamide acetyltransferase; Reviewed


Pssm-ID: 237000 [Multi-domain]  Cd Length: 547  Bit Score: 40.19  E-value: 4.33e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 319 GSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQ-----GLPIpdpsscAQPKSLGPK 393
Cdd:PRK11855  196 AAAPAAAAAPAAAAPAAAAAAAPAPAPAAAAAPAAAAPAAAAAPGKAPHASPAVRRlarelGVDL------SQVKGTGKK 269

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2064674933 394 SR----------RSRAPRPEAAEQVPAAGQGPGPQL 419
Cdd:PRK11855  270 GRitkedvqafvKGAMSAAAAAAAAAAAAGGGGLGL 305
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 141-415 5.08e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 40.15  E-value: 5.08e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  141 SSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPAS-SQAPLRPEDDILYQWRQRRKLEQAQGSKGD 219
Cdd:PHA03307    84 SRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPdLSEMLRPVGSPGPPPAASPPAAGASPAAVA 163

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  220 RAWVPPLTPALRTLTSPAPVETLSS-----------LGTQPNHVPLWSSVAQPGP-PEAFYVERPPFPSVSSPHIFWAPS 287
Cdd:PHA03307   164 SDAASSRQAALPLSSPEETARAPSSppaepppstppAAASPRPPRRSSPISASASsPAPAPGRSAADDAGASSSDSSSSE 243

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  288 SHGFFWAPQS---GPWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLAC----TP 360
Cdd:PHA03307   244 SSGCGWGPENecpLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSssssRE 323

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2064674933  361 APPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGP 415
Cdd:PHA03307   324 SSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSP 378
PHA03247 PHA03247
large tegument protein UL36; Provisional
 152-429 6.25e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.92  E-value: 6.25e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  152 PFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPeddilyqwRQRRKLEQAQGSKGDRAWVPPLTPALR 231
Cdd:PHA03247  2710 PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGP--------ARPARPPTTAGPPAPAPPAAPAAGPPR 2781

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  232 TLTSPAPVETLSSLGTQPN-HVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIFwAPSSHGFFWAPQSGPWVSLGAVPPtq 310
Cdd:PHA03247  2782 RLTRPAVASLSESRESLPSpWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA-QPTAPPPPPGPPPPSLPLGGSVAP-- 2858

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933  311 qASTLAHLGSTLAPPASLASTLEPPAS---------TPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDP 381
Cdd:PHA03247  2859 -GGDVRRRPPSRSPAAKPAAPARPPVRrlarpavsrSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP 2937

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*...
gi 2064674933  382 SSCAQPkslgpksrrsrAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAA 429
Cdd:PHA03247  2938 RPQPPL-----------APTTDPAGAGEPSGAVPQPWLGALVPGRVAV 2974
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
335-528 8.11e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 39.45  E-value: 8.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 335 PASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQG 414
Cdd:PRK07003  360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRG 439

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 415 PGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSvi 494
Cdd:PRK07003  440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS-- 517

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2064674933 495 RKSEATPspgaclqPEVPLSPAEQATTVKASPPA 528
Cdd:PRK07003  518 REDAPAA-------AAPPAPEARPPTPAAAAPAA 544
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 181-329 8.80e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 39.25  E-value: 8.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674933 181 PTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRtltspAPVETLsslgTQPNHVPLWSSVAQ 260
Cdd:pfam09770 210 PAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQPQQPQQHPGQG-----HPVTIL----QRPQSPQPDPAQPS 280

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2064674933 261 PGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQA----STLAHLGSTLAPPASLA 329
Cdd:pfam09770 281 IQPQAQQFHQQPPPVPVQPTQILQNPNRLSAARVGYPQNPQPGVQPAPAHQAhrqqGSFGRQAPIITHPQQLA 353
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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