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Conserved domains on  [gi|88501736|ref|NP_001034639|]
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dnaJ homolog subfamily B member 2 isoform a [Homo sapiens]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 4-136 3.71e-41

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 145.29  E-value: 3.71e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLtgtgtgpsra 83
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF---------- 74

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 88501736   84 EAGSGGPGftftfrspeevfrefFGSGDPFAELFDDLgpFSEL--QNRGSRHSGP 136
Cdd:PRK10767  75 EQGGGGGG---------------FGGGGGFGDIFGDI--FGDIfgGGRGGGRQRA 112
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-136 3.71e-41

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 145.29  E-value: 3.71e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLtgtgtgpsra 83
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF---------- 74

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 88501736   84 EAGSGGPGftftfrspeevfrefFGSGDPFAELFDDLgpFSEL--QNRGSRHSGP 136
Cdd:PRK10767  75 EQGGGGGG---------------FGGGGGFGDIFGDI--FGDIfgGGRGGGRQRA 112
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-110 1.49e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 140.81  E-value: 1.49e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736     3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDnKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGtgtGPSR 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KE-AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNG---GGGG 75

                          90       100
                  ....*....|....*....|....*...
gi 88501736    83 AEAGSGGPGFTFtFRSPEEVFREFFGSG 110
Cdd:TIGR02349  76 GGGGFNGFDIGF-FGDFGDIFGDFFGGG 102
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 1.43e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.51  E-value: 1.43e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 88501736     3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-85 1.36e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 119.42  E-value: 1.36e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736   3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSR 82
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAE 79


                ...
gi 88501736  83 AEA 85
Cdd:COG0484  80 SAA 82
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-61 6.24e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 109.63  E-value: 6.24e-31
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 88501736      3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
4-119 2.33e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 115.30  E-value: 2.33e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTgtgpsra 83
Cdd:NF037946   7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGE------- 77

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 88501736   84 eagsggPGFTFtfrSPEEVFREFFGSGDPFAELFDD 119
Cdd:NF037946  78 ------GGFGF---DAFDVFSSFFETINKSGAFLDD 104
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-58 5.56e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 101.85  E-value: 5.56e-28
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 88501736   4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:cd06257   2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-136 3.71e-41

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 145.29  E-value: 3.71e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLtgtgtgpsra 83
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF---------- 74

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 88501736   84 EAGSGGPGftftfrspeevfrefFGSGDPFAELFDDLgpFSEL--QNRGSRHSGP 136
Cdd:PRK10767  75 EQGGGGGG---------------FGGGGGFGDIFGDI--FGDIfgGGRGGGRQRA 112
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-110 1.49e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 140.81  E-value: 1.49e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736     3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDnKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGtgtGPSR 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KE-AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNG---GGGG 75

                          90       100
                  ....*....|....*....|....*...
gi 88501736    83 AEAGSGGPGFTFtFRSPEEVFREFFGSG 110
Cdd:TIGR02349  76 GGGGFNGFDIGF-FGDFGDIFGDFFGGG 102
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 1.43e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.51  E-value: 1.43e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 88501736     3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-110 2.35e-36

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 132.58  E-value: 2.35e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTgpsra 83
Cdd:PRK14294   6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKE-AEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGF----- 79

                         90       100
                 ....*....|....*....|....*..
gi 88501736   84 eagSGGPGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14294  80 ---SGFSGFDDIFSSFGDIFEDFFGFG 103
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-85 1.36e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 119.42  E-value: 1.36e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736   3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSR 82
Cdd:COG0484   1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAE 79


                ...
gi 88501736  83 AEA 85
Cdd:COG0484  80 SAA 82
PRK14289 PRK14289
molecular chaperone DnaJ;
4-132 3.22e-33

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 124.94  E-value: 3.22e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGpsra 83
Cdd:PRK14289   7 YYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKE-AEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGG---- 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 88501736   84 eAGSGGPGFtftfrSPEEVFREFfgsGDPFAELFDDLGPFSELQNRGSR 132
Cdd:PRK14289  82 -GGFSGEGM-----SMEDIFSMF---GDIFGGHGGGFGGFGGFGGGGSQ 121
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 4-132 1.29e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 122.98  E-value: 1.29e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRegltgTGTGPSRA 83
Cdd:PRK14282   6 YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGY-----VGEQPPYQ 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 88501736   84 EAGSGGPGFtftfrspEEVFREF--FGSGDPFAELFDDLGPFSELQNRGSR 132
Cdd:PRK14282  81 ETESGGGFF-------EDIFKDFenIFNRDIFDIFFGERRTQEEQREYARR 124
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 4-117 1.33e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 122.93  E-value: 1.33e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGtgpsra 83
Cdd:PRK14301   6 YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPE-AEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG------ 78

                         90       100       110
                 ....*....|....*....|....*....|....
gi 88501736   84 eaGSGGpgftftFRSPEEVFREFfgsGDPFAELF 117
Cdd:PRK14301  79 --GFGG------FSSAEDIFSHF---SDIFGDLF 101
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 4-135 1.17e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 120.68  E-value: 1.17e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSRA 83
Cdd:PRK14281   5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKE-AEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGP 83

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 88501736   84 EAGSGGPGFTFTFRSPEEVFR--EFFGSGDPFAelFDDLgpFSELQNRGSRHSG 135
Cdd:PRK14281  84 GYGGGGGDFNDIFSAFNDMFGggARRGGGSPFG--FEDV--FGGGGRRRRASAG 133
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 2-121 2.61e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 119.56  E-value: 2.61e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREgltgtgtGPS 81
Cdd:PRK14284   1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAE-AEKRFKEVSEAYEVLSDAQKRESYDRYGKD-------GPF 72

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 88501736   82 RAEAGSGGPGFTftfrSPEEVFREF-------FGSGDPFAE-LFDDLG 121
Cdd:PRK14284  73 AGAGGFGGAGMG----NMEDALRTFmgafggeFGGGGSFFEgLFGGLG 116
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 4-115 2.65e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 119.49  E-value: 2.65e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPdNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTgpsra 83
Cdd:PRK14291   5 YYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPE-AEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQ----- 77

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 88501736   84 eAGSGGPGFT-FTFRSPEEVFREF---FGSGDPFAE 115
Cdd:PRK14291  78 -QQQGQEGFSdFGGGNIEDILEDVfdiFGFGDIFGR 112
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-61 6.24e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 109.63  E-value: 6.24e-31
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 88501736      3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 4-110 3.14e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 116.82  E-value: 3.14e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSR- 82
Cdd:PRK14277   7 YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKE-AEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGGf 85

                         90       100
                 ....*....|....*....|....*...
gi 88501736   83 AEAGSGGPGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14277  86 GQGGFGGGGFDFDFGGFGDIFEDIFGDF 113
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
4-119 2.33e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 115.30  E-value: 2.33e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTgtgpsra 83
Cdd:NF037946   7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGE------- 77

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 88501736   84 eagsggPGFTFtfrSPEEVFREFFGSGDPFAELFDD 119
Cdd:NF037946  78 ------GGFGF---DAFDVFSSFFETINKSGAFLDD 104
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 4-113 5.34e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 110.41  E-value: 5.34e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRygreglTGTgtgpsrA 83
Cdd:PRK14290   5 YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQ------TGT------V 72

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 88501736   84 EAGSGGPGFT---FT-FRSPEEVFREFFGS--GDPF 113
Cdd:PRK14290  73 DFGAGGSNFNwdnFThFSDINDIFNQIFGGnfGSDF 108
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-58 5.56e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 101.85  E-value: 5.56e-28
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 88501736   4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:cd06257   2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-83 5.84e-28

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 102.87  E-value: 5.84e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736   1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGP 80
Cdd:COG2214   4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDRELGQSGKGSASQP 83


                ...
gi 88501736  81 SRA 83
Cdd:COG2214  84 SAA 86
PRK14280 PRK14280
molecular chaperone DnaJ;
4-114 6.86e-28

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 110.20  E-value: 6.86e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGtGTGPSRA 83
Cdd:PRK14280   6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN--KEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQ-GFGGGGF 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 88501736   84 EAGSGGPGFTFtfrspEEVFREFFGSG----DPFA 114
Cdd:PRK14280  83 GGGDFGGGFGF-----EDIFSSFFGGGgrrrDPNA 112
PRK14293 PRK14293
molecular chaperone DnaJ;
1-110 5.37e-27

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 107.77  E-value: 5.37e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKnpdNKEF-AEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTG 79
Cdd:PRK14293   2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF 78

                         90       100       110
                 ....*....|....*....|....*....|.
gi 88501736   80 PSRAEAGsggpGFTFTFrspEEVFREFFGSG 110
Cdd:PRK14293  79 PDMGDMG----GFADIF---ETFFSGFGGAG 102
PRK14297 PRK14297
molecular chaperone DnaJ;
1-110 5.74e-27

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 107.56  E-value: 5.74e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    1 MAS--YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGt 78
Cdd:PRK14297   1 MASkdYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKE-AEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG- 78

                         90       100       110
                 ....*....|....*....|....*....|....
gi 88501736   79 gpsraEAGSGG-PGFTFT-FRSPEEVFREFFGSG 110
Cdd:PRK14297  79 -----GFGSGGfGGFDFSdMGGFGDIFDSFFGGG 107
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 4-136 4.38e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 105.32  E-value: 4.38e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTgtgpsra 83
Cdd:PRK14298   7 YYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPD--AEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQ------- 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 88501736   84 eagsggpgftftfRSPEEVFR--EFFGSGDPFAELFDDlgpfselqNRGSRHSGP 136
Cdd:PRK14298  78 -------------YSAEDIFRgaDFGGFGDIFEMFFGG--------GGRRGRMGP 111
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 4-110 4.89e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 105.17  E-value: 4.89e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSRA 83
Cdd:PRK14276   6 YYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAGG 83

                         90       100
                 ....*....|....*....|....*..
gi 88501736   84 EAGSGGPGFTFTFrspEEVFREFFGSG 110
Cdd:PRK14276  84 FGGFDGSGGFGGF---EDIFSSFFGGG 107
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 3-110 6.13e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 104.69  E-value: 6.13e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGtgtgpsr 82
Cdd:PRK14286   5 SYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKE-SEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNA------- 76

                         90       100       110
                 ....*....|....*....|....*....|....
gi 88501736   83 aeaGSGGPG------FTFTFRSPEEVFREFFGSG 110
Cdd:PRK14286  77 ---GAGGFGqgaytdFSDIFGDFGDIFGDFFGGG 107
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 4-117 1.65e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 103.53  E-value: 1.65e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLtgtgtgpsra 83
Cdd:PRK14285   5 YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKE-AESIFKEATEAYEVLIDDNKRAQYDRFGHTAF---------- 73

                         90       100       110
                 ....*....|....*....|....*....|....
gi 88501736   84 EAGSGGPGFTFTFRSPEEVFREFfgsGDPFAELF 117
Cdd:PRK14285  74 EGGGGFEGFSGGFSGFSDIFEDF---GDIFDSFF 104
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 4-135 7.74e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 100.40  E-value: 7.74e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSRA 83
Cdd:PRK14299   6 YYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPG--AEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPPG 83

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 88501736   84 EAGSGG-PGFTFTFRSpeEVFREFFGSgdpfAELFDDLGPFSELQNRGSRHSG 135
Cdd:PRK14299  84 PPGGGDfSGFNVGDFS--DFFQQLFGG----RGGFGGFGDLFGSVGRRARKGR 130
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 4-63 1.34e-24

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 93.14  E-value: 1.34e-24
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736   4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKRE 63
Cdd:COG5407   2 PYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPK-AEERFKEINEAYELLSDAEKRA 60
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 1-110 2.59e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 100.51  E-value: 2.59e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    1 MAS-YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLSDKHKREIYDrygregltgTGTG 79
Cdd:PRK14278   1 MARdYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVD---------LGGD 69

                         90       100       110
                 ....*....|....*....|....*....|.
gi 88501736   80 PsRAEAGSGGPGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14278  70 P-LESAGGGGGGFGGGFGGLGDVFEAFFGGG 99
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 4-139 2.16e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 97.97  E-value: 2.16e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTgtgpsra 83
Cdd:PRK14283   7 YYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF------- 77

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 88501736   84 eagsggpgftftfrSPEEVFRE------FFGSGDPFAELFDDLGpFSELQNRGSRHSGPFFT 139
Cdd:PRK14283  78 --------------SQEDIFNNinfediFQGFGFGIGNIFDMFG-FGGGSRHGPQRGADIYT 124
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-110 2.61e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 97.65  E-value: 2.61e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLSDKHKREIYDRYGreglTGTGTGP 80
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFG----TAPGAGM 74

                         90       100       110
                 ....*....|....*....|....*....|
gi 88501736   81 sraeagSGGPGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14292  75 ------PGGDPFGGMGFDPMDIFEQLFGGA 98
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-79 1.06e-22

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 96.43  E-value: 1.06e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTG 79
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQP 100
PRK14279 PRK14279
molecular chaperone DnaJ;
4-136 2.66e-22

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 95.18  E-value: 2.66e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYgREGLTGTGTGPSRA 83
Cdd:PRK14279  11 FYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPA-AEERFKAVSEAHDVLSDPAKRKEYDET-RRLFAGGGFGGRRF 88

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 88501736   84 EAGSGGPGFTFTFRSPEEVFREFF-GSGDPFAELFDDLgpFSELQNRGSRHSGP 136
Cdd:PRK14279  89 DGGGGFGGFGTGGDGAEFNLNDLFdAAGRGGGGGIGDL--FGGLFNRGGGSARP 140
PRK14295 PRK14295
molecular chaperone DnaJ;
4-136 2.66e-22

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 94.92  E-value: 2.66e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDrygrEGLTGTGTGPSRA 83
Cdd:PRK14295  11 YYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAK-AEERFKEISEAYDVLSDEKKRKEYD----EARSLFGNGGFRP 85

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 88501736   84 EAGSGGPGfTFTFRspeevFREFFGSGDP------FAELFDDLgpFSELQNRGSRHSGP 136
Cdd:PRK14295  86 GPGGGGGG-GFNFD-----LGDLFGGGAQggggagGGGGLGDV--FGGLFNRGGRRTQP 136
PRK14288 PRK14288
molecular chaperone DnaJ;
3-81 1.73e-19

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 87.05  E-value: 1.73e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 88501736    3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPS 81
Cdd:PRK14288   4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKE-AEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 4-110 4.31e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 82.75  E-value: 4.31e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRegltgtgTGPSRA 83
Cdd:PRK14287   6 YYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGH-------TDPNQG 76

                         90       100
                 ....*....|....*....|....*..
gi 88501736   84 EAGSGGPGFTftfrSPEEVFREFFGSG 110
Cdd:PRK14287  77 FGGGGAGDFG----GFSDIFDMFFGGG 99
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 4-110 5.31e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 82.75  E-value: 5.31e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPDkNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSRA 83
Cdd:PRK14300   5 YYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKD-AEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGG 82

                         90       100
                 ....*....|....*....|....*..
gi 88501736   84 EAGSGGPGFTFTFrspEEVFREFFGSG 110
Cdd:PRK14300  83 NHGGFHPDINDIF---GDFFSDFMGGS 106
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 4-110 7.09e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 82.30  E-value: 7.09e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPD--KNPDnkefAEKKFKEVAEAYEVLSDKHKREIYDRYGR---EGLTGTGT 78
Cdd:PRK14296   6 YYEVLGVSKTASEQEIRQAYRKLAKQYHPDlnKSPD----AHDKMVEINEAADVLLDKDKRKQYDQFGHaafDGSSGFSS 81

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 88501736   79 GPSRAE------AGSGGPGFTftfrspeEVFREFFGSG 110
Cdd:PRK14296  82 NFGDFEdlfsnmGSSGFSSFT-------NIFSDFFGSN 112
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 4-133 4.19e-17

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 81.01  E-value: 4.19e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 88501736     4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTgtgpsra 83
Cdd:TIGR03835   4 YYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPD--AASIFAEINEANDVLSNPKKRANYDKYGHDGVDRE------- 74

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 88501736    84 eagsggPGFTFTfrspEEVFREFF---GSGDPFAELFDDLGPFSELQNRGSRH 133
Cdd:TIGR03835  75 ------DDFDFQ----ADVFNSFFeeiNKSGEFDNITDDDTPSKKKKKKKKKG 117
PRK10266 PRK10266
curved DNA-binding protein;
4-67 1.84e-14

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 71.78  E-value: 1.84e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 88501736    4 YYEILDVPRSASADDIKKAYRRKALQWHPD--KNPDnkefAEKKFKEVAEAYEVLSDKHKREIYDR 67
Cdd:PRK10266   6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQ 67
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 5.05e-13

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 62.89  E-value: 5.05e-13
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 88501736   1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDK-----NPDNKEFAEKKFKEVAEAYEVLSDKHKREI 64
Cdd:COG1076   3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-75 1.59e-10

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 61.34  E-value: 1.59e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 88501736     4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFaeKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGF--HKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644
PHA03102 PHA03102
Small T antigen; Reviewed
 6-58 8.44e-07

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 47.74  E-value: 8.44e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 88501736    6 EILDVPRSASAD--DIKKAYRRKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSD 58
Cdd:PHA03102   9 DLLGLPRSAWGNlpLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRE 58
PHA02624 PHA02624
large T antigen; Provisional
 6-58 7.70e-06

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 46.90  E-value: 7.70e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 88501736    6 EILDVPRSA--SADDIKKAYRRKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSD 58
Cdd:PHA02624  15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQE 64
djlA PRK09430
co-chaperone DjlA;
5-56 1.57e-05

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 45.19  E-value: 1.57e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 88501736    5 YEILDVPRSASADDIKKAYRRKALQWHPDK------NPDNKEFAEKKFKEVAEAYEVL 56
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 1.58e-04

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 42.71  E-value: 1.58e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 88501736   2 ASYYEILDVPR---SASADDIKKAYRRKALQWHPDK-----NPDNKEFaekkFKEVAEAYEVLSDKHKREIYD 66
Cdd:COG5269  43 VDLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKtaaggNKGCDEF----FKLIQKAREVLGDRKLRLQYD 111
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 5.97e-03

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 36.78  E-value: 5.97e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 88501736    1 MASYYEILDVPRSASAD--DIKKAYRRKALQWHPDKnpdNKEFAEKK-----FKEVAEAYEVLSDKHKREIY 65
Cdd:PRK01356   1 MQNYFQLLGLPQEYNIDlkILEKQYFAMQVKYHPDK---AKTLQEKEqnliiASELNNAYSTLKDALKRAEY 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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