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Conserved domains on  [gi|2462626663|ref|XP_054219890|]
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microtubule organization protein AKNA isoform X7 [Homo sapiens]

Protein Classification

AKNA domain-containing protein( domain architecture ID 10575473)

AKNA domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AKNA pfam12443
AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is ...
 598-696 1.27e-34

AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is approximately 110 amino acids in length. This family contains a transcription factor which regulates the expression of the costimulatory molecules on lymphocytes.


:

Pssm-ID: 463585  Cd Length: 95  Bit Score: 127.57  E-value: 1.27e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462626663  598 FQRLKAAHAALEEEYLKACREQHPAQLLAGSKGTPGRFDPRRELEAEIYRLGSCLEELKEHIDQTQQEPEPPGSDSALDS 677
Cdd:pfam12443    1 FQQLKAAPAALEEEYLTGCRSETLALKLSSSKGQPGPFDPSRELEAEIYQLGQRLQELKDQTDQLKQKVEEFSKDIAQDS 80

                           90
                   ....*....|....*....
gi 2462626663  678 tpalPCLHQPTHLPAPSGQ 696
Cdd:pfam12443   81 ----PGPHQDAHLPLPSGQ 95
 
Name Accession Description Interval E-value
AKNA pfam12443
AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is ...
 598-696 1.27e-34

AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is approximately 110 amino acids in length. This family contains a transcription factor which regulates the expression of the costimulatory molecules on lymphocytes.


Pssm-ID: 463585  Cd Length: 95  Bit Score: 127.57  E-value: 1.27e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462626663  598 FQRLKAAHAALEEEYLKACREQHPAQLLAGSKGTPGRFDPRRELEAEIYRLGSCLEELKEHIDQTQQEPEPPGSDSALDS 677
Cdd:pfam12443    1 FQQLKAAPAALEEEYLTGCRSETLALKLSSSKGQPGPFDPSRELEAEIYQLGQRLQELKDQTDQLKQKVEEFSKDIAQDS 80

                           90
                   ....*....|....*....
gi 2462626663  678 tpalPCLHQPTHLPAPSGQ 696
Cdd:pfam12443   81 ----PGPHQDAHLPLPSGQ 95
 
Name Accession Description Interval E-value
AKNA pfam12443
AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is ...
 598-696 1.27e-34

AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is approximately 110 amino acids in length. This family contains a transcription factor which regulates the expression of the costimulatory molecules on lymphocytes.


Pssm-ID: 463585  Cd Length: 95  Bit Score: 127.57  E-value: 1.27e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462626663  598 FQRLKAAHAALEEEYLKACREQHPAQLLAGSKGTPGRFDPRRELEAEIYRLGSCLEELKEHIDQTQQEPEPPGSDSALDS 677
Cdd:pfam12443    1 FQQLKAAPAALEEEYLTGCRSETLALKLSSSKGQPGPFDPSRELEAEIYQLGQRLQELKDQTDQLKQKVEEFSKDIAQDS 80

                           90
                   ....*....|....*....
gi 2462626663  678 tpalPCLHQPTHLPAPSGQ 696
Cdd:pfam12443   81 ----PGPHQDAHLPLPSGQ 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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