|
Name |
Accession |
Description |
Interval |
E-value |
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
43-307 |
1.07e-35 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 133.50 E-value: 1.07e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 43 GTRLATCSSDRSVKIFDVRNGGqiLIADLRGHEGPVWQVAWAHPmyGNILASCSYDRKVIIWREENGtwEKSHEHAGHDS 122
Cdd:COG2319 132 GKTLASGSADGTVRLWDLATGK--LLRTLTGHSGAVTSVAFSPD--GKLLASGSDDGTVRLWDLATG--KLLRTLTGHTG 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 123 SVNSVCWAPHdyGLILACGSSDGAISLltYTGEGQWEVKKInNAHTIGCNAVSWapavvpgslidHPSGQkpnyikRFAS 202
Cdd:COG2319 206 AVRSVAFSPD--GKLLASGSADGTVRL--WDLATGKLLRTL-TGHSGSVRSVAF-----------SPDGR------LLAS 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 203 GGCDNLIKLWkeeeDGQWKEE-QKLEAHSDWVRDVAWAPSiGlptSTIASCSQDGRVFIWtcddassNTWSPKLLHKFN- 280
Cdd:COG2319 264 GSADGTVRLW----DLATGELlRTLTGHSGGVNSVAFSPD-G---KLLASGSDDGTVRLW-------DLATGKLLRTLTg 328
|
250 260
....*....|....*....|....*....
gi 2462591824 281 --DVVWHVSWSITANILAVSGGDNKVTLW 307
Cdd:COG2319 329 htGAVRSVAFSPDGKTLASGSDDGTVRLW 357
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
28-307 |
6.23e-31 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 118.21 E-value: 6.23e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 28 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGgqILIADLRGHEGPVWQVAWAHpmYGNILASCSYDRKVIIWREE 107
Cdd:cd00200 6 KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETG--ELLRTLKGHTGPVRDVAASA--DGTYLASGSSDKTIRLWDLE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 108 NGtwEKSHEHAGHDSSVNSVCWAPHDYglILACGSSDGAISLltytgegqWEVKKIN-----NAHTIGCNAVSWAPAvvp 182
Cdd:cd00200 82 TG--ECVRTLTGHTSYVSSVAFSPDGR--ILSSSSRDKTIKV--------WDVETGKclttlRGHTDWVNSVAFSPD--- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 183 gslidhpsgqkpnyiKRFASGGC-DNLIKLWkeeEDGQWKEEQKLEAHSDWVRDVAWAPSiglpTSTIASCSQDGRVFIW 261
Cdd:cd00200 147 ---------------GTFVASSSqDGTIKLW---DLRTGKCVATLTGHTGEVNSVAFSPD----GEKLLSSSSDGTIKLW 204
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2462591824 262 tcdDASSNTWSpKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW 307
Cdd:cd00200 205 ---DLSTGKCL-GTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW 246
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
67-104 |
2.89e-05 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 40.76 E-value: 2.89e-05
10 20 30
....*....|....*....|....*....|....*...
gi 2462591824 67 LIADLRGHEGPVWQVAWAHpmYGNILASCSYDRKVIIW 104
Cdd:smart00320 4 LLKTLKGHTGPVTSVAFSP--DGKYLASGSDDGTIKLW 39
|
|
| PTZ00420 |
PTZ00420 |
coronin; Provisional |
29-108 |
1.76e-04 |
|
coronin; Provisional
Pssm-ID: 240412 [Multi-domain] Cd Length: 568 Bit Score: 43.40 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 29 SHEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQIL--IAD----LRGHEGPVWQVAWaHPMYGNILASCSYDRKV 101
Cdd:PTZ00420 72 GHTSSILDLQFNpCFSEILASGSEDLTIRVWEIPHNDESVkeIKDpqciLKGHKKKISIIDW-NPMNYYIMCSSGFDSFV 150
|
....*..
gi 2462591824 102 IIWREEN 108
Cdd:PTZ00420 151 NIWDIEN 157
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
220-261 |
5.34e-04 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 36.94 E-value: 5.34e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2462591824 220 WKEEQKLEAHSDWVRDVAWAPSiglpTSTIASCSQDGRVFIW 261
Cdd:pfam00400 1 GKLLKTLEGHTGSVTSLAFSPD----GKLLASGSDDGTVKVW 38
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
43-307 |
1.07e-35 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 133.50 E-value: 1.07e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 43 GTRLATCSSDRSVKIFDVRNGGqiLIADLRGHEGPVWQVAWAHPmyGNILASCSYDRKVIIWREENGtwEKSHEHAGHDS 122
Cdd:COG2319 132 GKTLASGSADGTVRLWDLATGK--LLRTLTGHSGAVTSVAFSPD--GKLLASGSDDGTVRLWDLATG--KLLRTLTGHTG 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 123 SVNSVCWAPHdyGLILACGSSDGAISLltYTGEGQWEVKKInNAHTIGCNAVSWapavvpgslidHPSGQkpnyikRFAS 202
Cdd:COG2319 206 AVRSVAFSPD--GKLLASGSADGTVRL--WDLATGKLLRTL-TGHSGSVRSVAF-----------SPDGR------LLAS 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 203 GGCDNLIKLWkeeeDGQWKEE-QKLEAHSDWVRDVAWAPSiGlptSTIASCSQDGRVFIWtcddassNTWSPKLLHKFN- 280
Cdd:COG2319 264 GSADGTVRLW----DLATGELlRTLTGHSGGVNSVAFSPD-G---KLLASGSDDGTVRLW-------DLATGKLLRTLTg 328
|
250 260
....*....|....*....|....*....
gi 2462591824 281 --DVVWHVSWSITANILAVSGGDNKVTLW 307
Cdd:COG2319 329 htGAVRSVAFSPDGKTLASGSDDGTVRLW 357
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
43-307 |
2.61e-34 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 130.03 E-value: 2.61e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 43 GTRLATCSSDRSVKIFDVRNGGqiLIADLRGHEGPVWQVAWAHPmyGNILASCSYDRKVIIWREENGTWEKSHEhaGHDS 122
Cdd:COG2319 174 GKLLASGSDDGTVRLWDLATGK--LLRTLTGHTGAVRSVAFSPD--GKLLASGSADGTVRLWDLATGKLLRTLT--GHSG 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 123 SVNSVCWAPHdyGLILACGSSDGAISLLTYTGegqWEVKKINNAHTIGCNAVSWapavvpgslidHPSGqkpnyiKRFAS 202
Cdd:COG2319 248 SVRSVAFSPD--GRLLASGSADGTVRLWDLAT---GELLRTLTGHSGGVNSVAF-----------SPDG------KLLAS 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 203 GGCDNLIKLWkeeEDGQWKEEQKLEAHSDWVRDVAWAPSiglpTSTIASCSQDGRVFIWtcddassNTWSPKLLHKFN-- 280
Cdd:COG2319 306 GSDDGTVRLW---DLATGKLLRTLTGHTGAVRSVAFSPD----GKTLASGSDDGTVRLW-------DLATGELLRTLTgh 371
|
250 260
....*....|....*....|....*...
gi 2462591824 281 -DVVWHVSWSITANILAVSGGDNKVTLW 307
Cdd:COG2319 372 tGAVTSVAFSPDGRTLASGSADGTVRLW 399
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
28-307 |
2.57e-33 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 127.33 E-value: 2.57e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 28 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGqiLIADLRGHEGPVWQVAWAHPmyGNILASCSYDRKVIIWREE 107
Cdd:COG2319 75 LGHTAAVLSVAFSPDGRLLASASADGTVRLWDLATGL--LLRTLTGHTGAVRSVAFSPD--GKTLASGSADGTVRLWDLA 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 108 NGtwEKSHEHAGHDSSVNSVCWAPhDyGLILACGSSDGAISLL-TYTGEGQWEVKkinnAHTIGCNAVSWApavvpgsli 186
Cdd:COG2319 151 TG--KLLRTLTGHSGAVTSVAFSP-D-GKLLASGSDDGTVRLWdLATGKLLRTLT----GHTGAVRSVAFS--------- 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 187 dhPSGQkpnyikRFASGGCDNLIKLWKEEedgQWKEEQKLEAHSDWVRDVAWAPSiGlptSTIASCSQDGRVFIWtcdDA 266
Cdd:COG2319 214 --PDGK------LLASGSADGTVRLWDLA---TGKLLRTLTGHSGSVRSVAFSPD-G---RLLASGSADGTVRLW---DL 275
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2462591824 267 SSNTWsPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW 307
Cdd:COG2319 276 ATGEL-LRTLTGHSGGVNSVAFSPDGKLLASGSDDGTVRLW 315
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
28-307 |
6.23e-31 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 118.21 E-value: 6.23e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 28 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGgqILIADLRGHEGPVWQVAWAHpmYGNILASCSYDRKVIIWREE 107
Cdd:cd00200 6 KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETG--ELLRTLKGHTGPVRDVAASA--DGTYLASGSSDKTIRLWDLE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 108 NGtwEKSHEHAGHDSSVNSVCWAPHDYglILACGSSDGAISLltytgegqWEVKKIN-----NAHTIGCNAVSWAPAvvp 182
Cdd:cd00200 82 TG--ECVRTLTGHTSYVSSVAFSPDGR--ILSSSSRDKTIKV--------WDVETGKclttlRGHTDWVNSVAFSPD--- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 183 gslidhpsgqkpnyiKRFASGGC-DNLIKLWkeeEDGQWKEEQKLEAHSDWVRDVAWAPSiglpTSTIASCSQDGRVFIW 261
Cdd:cd00200 147 ---------------GTFVASSSqDGTIKLW---DLRTGKCVATLTGHTGEVNSVAFSPD----GEKLLSSSSDGTIKLW 204
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2462591824 262 tcdDASSNTWSpKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW 307
Cdd:cd00200 205 ---DLSTGKCL-GTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW 246
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
25-308 |
2.87e-29 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 113.97 E-value: 2.87e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 25 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGqiLIADLRGHEGPVWQVAWaHPMyGNILASCSYDRKVIIW 104
Cdd:cd00200 45 RTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE--CVRTLTGHTSYVSSVAF-SPD-GRILSSSSRDKTIKVW 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 105 REENGtwEKSHEHAGHDSSVNSVCWAPHdyGLILACGSSDGAISLltytgegqWEVKKIN-----NAHTIGCNAVSWapa 179
Cdd:cd00200 121 DVETG--KCLTTLRGHTDWVNSVAFSPD--GTFVASSSQDGTIKL--------WDLRTGKcvatlTGHTGEVNSVAF--- 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 180 vvpgslidHPSGqkpnyiKRFASGGCDNLIKLWkEEEDGQWKEEqkLEAHSDWVRDVAWAPSIGLptstIASCSQDGRVF 259
Cdd:cd00200 186 --------SPDG------EKLLSSSSDGTIKLW-DLSTGKCLGT--LRGHENGVNSVAFSPDGYL----LASGSEDGTIR 244
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2462591824 260 IWtcddassNTWSPKLLHKF---NDVVWHVSWSITANILAVSGGDNKVTLWK 308
Cdd:cd00200 245 VW-------DLRTGECVQTLsghTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
43-307 |
9.01e-26 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 106.53 E-value: 9.01e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 43 GTRLATCSSDRSVKIFDVRNGGqiLIADLRGHEGPVWQVAWAHPmyGNILASCSYDRKVIIWREENGTWEksHEHAGHDS 122
Cdd:COG2319 48 GARLAAGAGDLTLLLLDAAAGA--LLATLLGHTAAVLSVAFSPD--GRLLASASADGTVRLWDLATGLLL--RTLTGHTG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 123 SVNSVCWAPHdyGLILACGSSDGAISLL-TYTGEGQWEVKkinnAHTIGCNAVSWapavvpgslidHPSGqkpnyiKRFA 201
Cdd:COG2319 122 AVRSVAFSPD--GKTLASGSADGTVRLWdLATGKLLRTLT----GHSGAVTSVAF-----------SPDG------KLLA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 202 SGGCDNLIKLWkeeEDGQWKEEQKLEAHSDWVRDVAWAPSiGlptSTIASCSQDGRVFIWtcdDASSNTWsPKLLHKFND 281
Cdd:COG2319 179 SGSDDGTVRLW---DLATGKLLRTLTGHTGAVRSVAFSPD-G---KLLASGSADGTVRLW---DLATGKL-LRTLTGHSG 247
|
250 260
....*....|....*....|....*.
gi 2462591824 282 VVWHVSWSITANILAVSGGDNKVTLW 307
Cdd:COG2319 248 SVRSVAFSPDGRLLASGSADGTVRLW 273
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
28-105 |
1.22e-10 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 62.24 E-value: 1.22e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462591824 28 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGqiLIADLRGHEGPVWQVAWAHPmyGNILASCSYDRKVIIWR 105
Cdd:COG2319 327 TGHTGAVRSVAFSPDGKTLASGSDDGTVRLWDLATGE--LLRTLTGHTGAVTSVAFSPD--GRTLASGSADGTVRLWD 400
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
67-104 |
2.89e-05 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 40.76 E-value: 2.89e-05
10 20 30
....*....|....*....|....*....|....*...
gi 2462591824 67 LIADLRGHEGPVWQVAWAHpmYGNILASCSYDRKVIIW 104
Cdd:smart00320 4 LLKTLKGHTGPVTSVAFSP--DGKYLASGSDDGTIKLW 39
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
219-261 |
1.34e-04 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 38.83 E-value: 1.34e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2462591824 219 QWKEEQKLEAHSDWVRDVAWAPSiglpTSTIASCSQDGRVFIW 261
Cdd:smart00320 1 SGELLKTLKGHTGPVTSVAFSPD----GKYLASGSDDGTIKLW 39
|
|
| PTZ00420 |
PTZ00420 |
coronin; Provisional |
29-108 |
1.76e-04 |
|
coronin; Provisional
Pssm-ID: 240412 [Multi-domain] Cd Length: 568 Bit Score: 43.40 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462591824 29 SHEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQIL--IAD----LRGHEGPVWQVAWaHPMYGNILASCSYDRKV 101
Cdd:PTZ00420 72 GHTSSILDLQFNpCFSEILASGSEDLTIRVWEIPHNDESVkeIKDpqciLKGHKKKISIIDW-NPMNYYIMCSSGFDSFV 150
|
....*..
gi 2462591824 102 IIWREEN 108
Cdd:PTZ00420 151 NIWDIEN 157
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
220-261 |
5.34e-04 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 36.94 E-value: 5.34e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2462591824 220 WKEEQKLEAHSDWVRDVAWAPSiglpTSTIASCSQDGRVFIW 261
Cdd:pfam00400 1 GKLLKTLEGHTGSVTSLAFSPD----GKLLASGSDDGTVKVW 38
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
67-104 |
5.55e-04 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 36.94 E-value: 5.55e-04
10 20 30
....*....|....*....|....*....|....*...
gi 2462591824 67 LIADLRGHEGPVWQVAWAHpmYGNILASCSYDRKVIIW 104
Cdd:pfam00400 3 LLKTLEGHTGSVTSLAFSP--DGKLLASGSDDGTVKVW 38
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
110-149 |
2.80e-03 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 34.98 E-value: 2.80e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2462591824 110 TWEKSHEHAGHDSSVNSVCWAPHdyGLILACGSSDGAISL 149
Cdd:smart00320 1 SGELLKTLKGHTGPVTSVAFSPD--GKYLASGSDDGTIKL 38
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