|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
478-898 |
1.10e-16 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 86.53 E-value: 1.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 478 PRATLAPSETPFVPQKLEIFTSPEMQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPE--RTTSAGTITPKISKSPEPTWTT 555
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGdpRGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 556 PAPGKTQfiSLKPKIPLSPEVTHTKPAPEPQTLLPSQSTIGPETPGTKPSTTLAPRKTKRPGRRPRPRPRPKTTPSPEVP 635
Cdd:PHA03247 2631 PSPAANE--PDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTP 2708
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 636 KSKPalePATIQPEPLVPTTASKPSERPKTTHRPDAPQIQPGSKPP--KQLLPKPQTTAEPD--MPPTKSVSEPVPFETE 711
Cdd:PHA03247 2709 EPAP---HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPggPARPARPPTTAGPPapAPPAAPAAGPPRRLTR 2785
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 712 APSMTIVPTTDIEP-----------VTVRTEATVTTLAPKTSQRTRTRRPRPKHKTTPRPETLQTKLDfGPITPGtssAP 780
Cdd:PHA03247 2786 PAVASLSESRESLPspwdpadppaaVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLG-GSVAPG---GD 2861
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 781 TTTTKRTRRPHPKPKTTPHPEV-----------PQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTSPS 849
Cdd:PHA03247 2862 VRRRPPSRSPAAKPAAPARPPVrrlarpavsrsTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQP 2941
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2462588872 850 PEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLEtrgIPFIPMISPSPSQE 898
Cdd:PHA03247 2942 PLAPTTDPAGAGEPSGAVPQPWLGALVPGRVA---VPRFRVPQPAPSRE 2987
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1114-1205 |
2.06e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.66 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1114 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQMTNQTFSTVENLKPNTSYEFQVKPKNP 1191
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 2462588872 1192 LGEGPVSNTVAFST 1205
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1115-1195 |
3.85e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.85 E-value: 3.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1115 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQMTNQTFS-TVENLKPNTSYEFQVKPKNPL 1192
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 2462588872 1193 GEG 1195
Cdd:smart00060 81 GEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1115-1198 |
1.40e-05 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 44.71 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1115 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQMTNQTFS-TVENLKPNTSYEFQVKPKNP 1191
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 2462588872 1192 LGEGPVS 1198
Cdd:pfam00041 79 GGEGPPS 85
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1109-1253 |
9.89e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.92 E-value: 9.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1109 TSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqmtNQTFSTVENLKPNTSYEFQV 1186
Cdd:COG3401 324 LTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGLTPGTTYYYKV 397
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462588872 1187 KPKNPLG-EGPVSNTVAFSTESADPRVSEPVSAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1253
Cdd:COG3401 398 TAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
906-1210 |
1.27e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.53 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 906 ETDQSTQEPFTTKIPRTTELAKTTQAPHRFYTTVRPRTSDKPHIRPGVKQAPRPSGADRNVSVDSTHPTKKPGTRRPPLP 985
Cdd:COG3401 23 VNALSKAGGSGKTILVYLAVVLSVTTKESPGTLLVAAGLSSGGGLGTGGRAGTTSGVAAVAVAAAPPTATGLTTLTGSGS 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 986 PRPTHPRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPRPTGTPLERIETDIKQPTVPASGEELENITDFSSSPTRET 1065
Cdd:COG3401 103 VGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDGANASGTTASSVAGAGVVVSPDTSATAAVAT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1066 DPLGKPRFKGPHVRYIQKPDNS----PCSITDSVKRFPKEEATEGNATSPPqNPPTNLTVVTVEgcPSFVILDWEKPLND 1141
Cdd:COG3401 183 TSLTVTSTTLVDGGGDIEPGTTyyyrVAATDTGGESAPSNEVSVTTPTTPP-SAPTGLTATADT--PGSVTLSWDPVTES 259
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1142 TVTEYEvISRENGSfSGKNKSIQMTNQTFSTVENLKPNTSYEFQVKPKNPLG-EGPVSNTVAFSTESADP 1210
Cdd:COG3401 260 DATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
444-865 |
1.30e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 46.45 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 444 PTTSDEPEISDSYTATSDRILDSIPPKTSRTLEQPRATLAP-------SETPF-VPQKLEIFTSPEMQPTTPAPQQTTSI 515
Cdd:pfam05109 310 PASQDMPTNTTDITYVGDNATYSVPMVTSEDANSPNVTVTAfwawpnnTETDFkCKWTLTSGTPSGCENISGAFASNRTF 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 516 PSTPKRRPRPKPPRTKPERTTSAGTITPKI--SKSPEPTWTTPAPGKTQFISLKPKIPLsPEVTH-----TKPA---PEP 585
Cdd:pfam05109 390 DITVSGLGTAPKTLIITRTATNATTTTHKVifSKAPESTTTSPTLNTTGFAAPNTTTGL-PSSTHvptnlTAPAstgPTV 468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 586 QTLLPSQSTIGPETPGTKPST-TLAPRKTKRPGRRPRPRPRPKTTPSPEVPKSKPALEPATIQPEPLVPTTASKPSERPK 664
Cdd:pfam05109 469 STADVTSPTPAGTTSGASPVTpSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAV 548
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 665 TTHRPDAPQIQPGSKPPKqllPKPQTTAEPDMPPTKSVSEPVPFETEAPSMTIVPTTDIEPVTV--RTEATVTTLAPKTS 742
Cdd:pfam05109 549 TTPTPNATSPTPAVTTPT---PNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLggTSSTPVVTSPPKNA 625
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 743 QRTRTRRPRPKHKTTPRPETLQTKLDFGPITPGTSSAPTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQTPRAP-PKPKT 821
Cdd:pfam05109 626 TSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPaPRPGT 705
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 2462588872 822 SPRPRIPQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLP 865
Cdd:pfam05109 706 TSQASGPGNSSTSTKPGEVNVTKGTPPKNATSPQAPSGQKTAVP 749
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
124-202 |
1.77e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 41.45 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 124 PLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCPNDRFYTIRYREKDKEKKWIFQICPA----TETIVENLKPNTVYEF 199
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTEYEF 72
|
...
gi 2462588872 200 GVK 202
Cdd:smart00060 73 RVR 75
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
123-202 |
1.97e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 41.25 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 123 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCPND-RFYTIRYREKDKEKKWIFQICPATET--IVENLKPNTVYEF 199
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 2462588872 200 GVK 202
Cdd:pfam00041 72 RVQ 74
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
778-1120 |
2.92e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.70 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 778 SAPTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQT------PR-------------------APPKPKTSPRP----RIP 828
Cdd:PHA03247 2490 FAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPvgepvhPRmltwirgleelasddagdpPPPLPPAAPPAapdrSVP 2569
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 829 QTQPVPKVPQ-RVTAKPKTSPSPEVSYTTPAPKDvllPHKPYPEVSQSEPAPLETRGiPFIPMISPSPSQEELQTTLEET 907
Cdd:PHA03247 2570 PPRPAPRPSEpAVTSRARRPDAPPQSARPRAPVD---DRGDPRGPAPPSPLPPDTHA-PDPPPPSPSPAANEPDPHPPPT 2645
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 908 DQSTQEPFTTKIPRTTELAKTTQAPHR-FYTTVRPRTSDKPHIRPGVKQ--------APRPSGADRNVSVDSTHPTKKPG 978
Cdd:PHA03247 2646 VPPPERPRDDPAPGRVSRPRRARRLGRaAQASSPPQRPRRRAARPTVGSltsladppPPPPTPEPAPHALVSATPLPPGP 2725
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 979 TRRPPLPPRPTHPRRKPLPPNnvtgkpGSAGIISSGPITTPPLRSTPRPTGTPLERIETDIKQPTVPASGeelenitdfS 1058
Cdd:PHA03247 2726 AAARQASPALPAAPAPPAVPA------GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA---------S 2790
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462588872 1059 SSPTRETDPLgkPRFKGPHVRYIQKPDNS-PCSITDSVKRFPKEEATEGNATSPPQNPPTNLT 1120
Cdd:PHA03247 2791 LSESRESLPS--PWDPADPPAAVLAPAAAlPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLP 2851
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
317-602 |
3.50e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 44.95 E-value: 3.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 317 ALPAESKTPEVEKISArPTTVTPETvPRSTKPTTSSALDVSETTLVLSKRTPETLQTIlipqfelPLSTLAPKSLPEFPE 396
Cdd:pfam17823 129 SLPAAIAALPSEAFSA-PRAAACRA-NASAAPRAAIAAASAPHAASPAPRTAASSTTA-------ASSTTAASSAPTTAA 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 397 AKTPFPFEKPRGTLASS----EKPWIVPTAKISEDSKVLQPQTATYDVFSSPTTSDEPEISDSYTATSDRILDSIPPKTS 472
Cdd:pfam17823 200 SSAPATLTPARGISTAAtatgHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARR 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 473 RTLEQPRATLAPSETPFVPQKLEIfTSPEMQPTTPAP-QQTTSIPSTPKRRPRPKPPRTKPERTTSAGTITPKISKSPEP 551
Cdd:pfam17823 280 LSPAKHMPSDTMARNPAAPMGAQA-QGPIIQVSTDQPvHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEP 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2462588872 552 TwTTPAPgktqfislKPKIPLSPEVTHTKPAPEPQTLLPSQSTIGPETPGT 602
Cdd:pfam17823 359 S-ASPVP--------VLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLA 400
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
123-202 |
7.38e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.17 E-value: 7.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 123 KPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcpndrFYTIRYREKDKE--KKWIFQICPATETIVENLKPNTVYEFG 200
Cdd:cd00063 3 PPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFR 73
|
..
gi 2462588872 201 VK 202
Cdd:cd00063 74 VR 75
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
597-847 |
1.02e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.22 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 597 PETPGTK----PSTTLAPRKTKRPGRRPRPRPRPKTTPSPEVPKSKPALEPATIQPEPLVPTTASKPseRPKTTHRPDAP 672
Cdd:NF033839 284 PKEPGNKkpsaPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETP--KPEVKPQPEKP 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 673 QIQPGSKPPKqllPKPQTTAEPDMPPTKSVSEPVPFETEAPSMTIVPTTDIEPVTVRTEATVTTLAPKTSQRTRTRRPRP 752
Cdd:NF033839 362 KPEVKPQPEK---PKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKP 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 753 KHKTTPRPETLQTKLDFGPITPGTSSAPTTTTkrtrrphPKPKTTPHPEVPQTKLA-PKQTPRAPPKPKTSPRPRIPQTQ 831
Cdd:NF033839 439 KPEVKPQPEKPKPEVKPQPETPKPEVKPQPEK-------PKPEVKPQPEKPKPDNSkPQADDKKPSTPNNLSKDKQPSNQ 511
|
250
....*....|....*.
gi 2462588872 832 PVPKvpQRVTAKPKTS 847
Cdd:NF033839 512 ASTN--EKATNKPKKS 525
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
792-879 |
3.11e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 41.76 E-value: 3.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 792 PKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRPripQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPYPE 871
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSA---VALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAPE 341
|
....*...
gi 2462588872 872 VSQSEPAP 879
Cdd:COG3266 342 AAAAAAAP 349
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
790-860 |
3.94e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.54 E-value: 3.94e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462588872 790 PHPKPKTTPHPEVPqtklAPKqtpraPPKPKTSPRPRIPQTQ--------PVPKVPQRVTAKPktSPSPEVSYTTPAPK 860
Cdd:NF033838 418 EQPQPAPAPQPEKP----APK-----PEKPAEQPKAEKPADQqaeedyarRSEEEYNRLTQQQ--PPKTEKPAQPSTPK 485
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
478-898 |
1.10e-16 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 86.53 E-value: 1.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 478 PRATLAPSETPFVPQKLEIFTSPEMQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPE--RTTSAGTITPKISKSPEPTWTT 555
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGdpRGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 556 PAPGKTQfiSLKPKIPLSPEVTHTKPAPEPQTLLPSQSTIGPETPGTKPSTTLAPRKTKRPGRRPRPRPRPKTTPSPEVP 635
Cdd:PHA03247 2631 PSPAANE--PDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTP 2708
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 636 KSKPalePATIQPEPLVPTTASKPSERPKTTHRPDAPQIQPGSKPP--KQLLPKPQTTAEPD--MPPTKSVSEPVPFETE 711
Cdd:PHA03247 2709 EPAP---HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPggPARPARPPTTAGPPapAPPAAPAAGPPRRLTR 2785
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 712 APSMTIVPTTDIEP-----------VTVRTEATVTTLAPKTSQRTRTRRPRPKHKTTPRPETLQTKLDfGPITPGtssAP 780
Cdd:PHA03247 2786 PAVASLSESRESLPspwdpadppaaVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLG-GSVAPG---GD 2861
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 781 TTTTKRTRRPHPKPKTTPHPEV-----------PQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTSPS 849
Cdd:PHA03247 2862 VRRRPPSRSPAAKPAAPARPPVrrlarpavsrsTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQP 2941
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2462588872 850 PEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLEtrgIPFIPMISPSPSQE 898
Cdd:PHA03247 2942 PLAPTTDPAGAGEPSGAVPQPWLGALVPGRVA---VPRFRVPQPAPSRE 2987
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
635-1060 |
2.80e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 75.36 E-value: 2.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 635 PKSKPALEPATiqPEPLVPTT--ASKPSERPKTT--HRPDAPQIQ--------PGSKPPKQLLPKPQTTAEPDMPPTKSV 702
Cdd:PHA03247 2553 PPLPPAAPPAA--PDRSVPPPrpAPRPSEPAVTSraRRPDAPPQSarprapvdDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 703 SEPVPFETEAPSMTIVPttdiEPVTVRTEATVTTLA-PKTSQRTRTRRPRPKHKTTPRPETLQTkldfgPITPGTSSA-- 779
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVP----PPERPRDDPAPGRVSrPRRARRLGRAAQASSPPQRPRRRAARP-----TVGSLTSLAdp 2701
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 780 PTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPR-------PRIPQTQPVPKVPQRVT--AKPKTSPSP 850
Cdd:PHA03247 2702 PPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAgpatpggPARPARPPTTAGPPAPAppAAPAAGPPR 2781
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 851 EVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEELQTTLEETDQSTQEPFTTKIPRTTELAK--- 927
Cdd:PHA03247 2782 RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPggd 2861
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 928 -TTQAPHRfYTTVRPRTSDKPHIRPGVKQAPRPSGADRNVSVDSTHPTKKPGTRRPPLPPRPTHPRRKPLPPNNVTGKP- 1005
Cdd:PHA03247 2862 vRRRPPSR-SPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPq 2940
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462588872 1006 -------GSAGIISSGPITTPPLRSTPRPTGTPLERIETDIKQPTVPASGEELENITDFSSS 1060
Cdd:PHA03247 2941 pplapttDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
382-800 |
7.19e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 67.27 E-value: 7.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 382 PLSTLAPKSLPEFPEAKTPFPFE-KPRGTLASSEKPWIVPTAKISED----SKVLQPQTATYD----VFSSPTTSDEPEI 452
Cdd:PHA03247 2608 PRGPAPPSPLPPDTHAPDPPPPSpSPAANEPDPHPPPTVPPPERPRDdpapGRVSRPRRARRLgraaQASSPPQRPRRRA 2687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 453 SDSYTATSDRILDsiPPKTSRTLE-QPRATLAPSETPFVPQKL-EIFTSPEMQPTTPAPQQTTSIPSTPKRRPRPKPPRT 530
Cdd:PHA03247 2688 ARPTVGSLTSLAD--PPPPPPTPEpAPHALVSATPLPPGPAAArQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAG 2765
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 531 KPERTTSAGTITPkiskspePTWTTPAPGKTQFISLKPKIPLSPEvthtkPAPEPQTLLPSQSTigpETPGTKPSTTLAP 610
Cdd:PHA03247 2766 PPAPAPPAAPAAG-------PPRRLTRPAVASLSESRESLPSPWD-----PADPPAAVLAPAAA---LPPAASPAGPLPP 2830
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 611 RKTKRPGRRPRPRPRPKTTPSPE--VPKSKPALEPATIQPEPLVPTTASKPSER-------PKTTHRPDAPQIQPGSKPP 681
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSLPLGgsVAPGGDVRRRPPSRSPAAKPAAPARPPVRrlarpavSRSTESFALPPDQPERPPQ 2910
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 682 KQLLPKPQTTAEPDMPPTKSVSEPVPFETEAPsmtIVPTTDIEPVtvrteatvttlapktsqrtrtrrprpkhkttPRPE 761
Cdd:PHA03247 2911 PQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPP---LAPTTDPAGA-------------------------------GEPS 2956
|
410 420 430
....*....|....*....|....*....|....*....
gi 2462588872 762 TLQTKLDFGPITPGTSSAPTTTTKRTRRPHPKPKTTPHP 800
Cdd:PHA03247 2957 GAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPP 2995
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1114-1205 |
2.06e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.66 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1114 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQMTNQTFSTVENLKPNTSYEFQVKPKNP 1191
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 2462588872 1192 LGEGPVSNTVAFST 1205
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1115-1195 |
3.85e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.85 E-value: 3.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1115 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQMTNQTFS-TVENLKPNTSYEFQVKPKNPL 1192
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 2462588872 1193 GEG 1195
Cdd:smart00060 81 GEG 83
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
701-901 |
7.10e-07 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 53.94 E-value: 7.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 701 SVSEPVPFETEAPSMTIVPTTDIEPVTvrTEATVTTLAPKTSQRTRtrrprpKHKTTPRPETLQTKLDFGPitpgTSSAP 780
Cdd:PRK10263 315 PITEPVAVAAAATTATQSWAAPVEPVT--QTPPVASVDVPPAQPTV------AWQPVPGPQTGEPVIAPAP----EGYPQ 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 781 TTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTSPSPEVSYttpAPK 860
Cdd:PRK10263 383 QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTF---APQ 459
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 2462588872 861 DVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEELQ 901
Cdd:PRK10263 460 STYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETK 500
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1115-1198 |
1.40e-05 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 44.71 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1115 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQMTNQTFS-TVENLKPNTSYEFQVKPKNP 1191
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 2462588872 1192 LGEGPVS 1198
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
790-876 |
6.10e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.50 E-value: 6.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 790 PHPKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPY 869
Cdd:PRK14950 366 PQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYT 445
|
....*..
gi 2462588872 870 PEVSQSE 876
Cdd:PRK14950 446 PPAPPKE 452
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1109-1253 |
9.89e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.92 E-value: 9.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1109 TSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqmtNQTFSTVENLKPNTSYEFQV 1186
Cdd:COG3401 324 LTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGLTPGTTYYYKV 397
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462588872 1187 KPKNPLG-EGPVSNTVAFSTESADPRVSEPVSAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1253
Cdd:COG3401 398 TAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
632-850 |
1.13e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 46.46 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 632 PEVPKSKPALEPATIQPEPLVPTTASKPSER--PK---TTHRPDAPQIQ-PGSKPPKQLLPKPQTTAEPDMPPTKSVSEP 705
Cdd:PLN03209 328 VPPKESDAADGPKPVPTKPVTPEAPSPPIEEepPQpkaVVPRPLSPYTAyEDLKPPTSPIPTPPSSSPASSKSVDAVAKP 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 706 VPFETEAPSMTIVPTTDIEPVTVRTE--------ATVTTLAPKTSQRTRTRRPRPKHKTTPRPETLQTklDFGPITPGTS 777
Cdd:PLN03209 408 AEPDVVPSPGSASNVPEVEPAQVEAKktrplspyARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVP--DTAPATAATD 485
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 778 SA-PTTTTKRTRRPHP-----KPKTTPHPEVPQTKLAPKQTPRAPP----KPKTSPRPRIPQTQPVPK----VPQRVTAK 843
Cdd:PLN03209 486 AAaPPPANMRPLSPYAvyddlKPPTSPSPAAPVGKVAPSSTNEVVKvgnsAPPTALADEQHHAQPKPRplspYTMYEDLK 565
|
....*..
gi 2462588872 844 PKTSPSP 850
Cdd:PLN03209 566 PPTSPTP 572
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
803-888 |
1.19e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 46.47 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 803 PQTKLAPKQTPRAPPKPKTSPRP-RIPQTQPVPKVPQRVTAKPKTSPSPEvSYTTPAPKDVLLPHKPYPEVSQSEPAPLE 881
Cdd:PRK14954 376 NDGGVAPSPAGSPDVKKKAPEPDlPQPDRHPGPAKPEAPGARPAELPSPA-SAPTPEQQPPVARSAPLPPSPQASAPRNV 454
|
....*..
gi 2462588872 882 TRGIPFI 888
Cdd:PRK14954 455 ASGKPGV 461
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
906-1210 |
1.27e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.53 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 906 ETDQSTQEPFTTKIPRTTELAKTTQAPHRFYTTVRPRTSDKPHIRPGVKQAPRPSGADRNVSVDSTHPTKKPGTRRPPLP 985
Cdd:COG3401 23 VNALSKAGGSGKTILVYLAVVLSVTTKESPGTLLVAAGLSSGGGLGTGGRAGTTSGVAAVAVAAAPPTATGLTTLTGSGS 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 986 PRPTHPRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPRPTGTPLERIETDIKQPTVPASGEELENITDFSSSPTRET 1065
Cdd:COG3401 103 VGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDGANASGTTASSVAGAGVVVSPDTSATAAVAT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1066 DPLGKPRFKGPHVRYIQKPDNS----PCSITDSVKRFPKEEATEGNATSPPqNPPTNLTVVTVEgcPSFVILDWEKPLND 1141
Cdd:COG3401 183 TSLTVTSTTLVDGGGDIEPGTTyyyrVAATDTGGESAPSNEVSVTTPTTPP-SAPTGLTATADT--PGSVTLSWDPVTES 259
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 1142 TVTEYEvISRENGSfSGKNKSIQMTNQTFSTVENLKPNTSYEFQVKPKNPLG-EGPVSNTVAFSTESADP 1210
Cdd:COG3401 260 DATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
444-865 |
1.30e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 46.45 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 444 PTTSDEPEISDSYTATSDRILDSIPPKTSRTLEQPRATLAP-------SETPF-VPQKLEIFTSPEMQPTTPAPQQTTSI 515
Cdd:pfam05109 310 PASQDMPTNTTDITYVGDNATYSVPMVTSEDANSPNVTVTAfwawpnnTETDFkCKWTLTSGTPSGCENISGAFASNRTF 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 516 PSTPKRRPRPKPPRTKPERTTSAGTITPKI--SKSPEPTWTTPAPGKTQFISLKPKIPLsPEVTH-----TKPA---PEP 585
Cdd:pfam05109 390 DITVSGLGTAPKTLIITRTATNATTTTHKVifSKAPESTTTSPTLNTTGFAAPNTTTGL-PSSTHvptnlTAPAstgPTV 468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 586 QTLLPSQSTIGPETPGTKPST-TLAPRKTKRPGRRPRPRPRPKTTPSPEVPKSKPALEPATIQPEPLVPTTASKPSERPK 664
Cdd:pfam05109 469 STADVTSPTPAGTTSGASPVTpSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAV 548
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 665 TTHRPDAPQIQPGSKPPKqllPKPQTTAEPDMPPTKSVSEPVPFETEAPSMTIVPTTDIEPVTV--RTEATVTTLAPKTS 742
Cdd:pfam05109 549 TTPTPNATSPTPAVTTPT---PNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLggTSSTPVVTSPPKNA 625
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 743 QRTRTRRPRPKHKTTPRPETLQTKLDFGPITPGTSSAPTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQTPRAP-PKPKT 821
Cdd:pfam05109 626 TSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPaPRPGT 705
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 2462588872 822 SPRPRIPQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLP 865
Cdd:pfam05109 706 TSQASGPGNSSTSTKPGEVNVTKGTPPKNATSPQAPSGQKTAVP 749
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
124-202 |
1.77e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 41.45 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 124 PLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCPNDRFYTIRYREKDKEKKWIFQICPA----TETIVENLKPNTVYEF 199
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTEYEF 72
|
...
gi 2462588872 200 GVK 202
Cdd:smart00060 73 RVR 75
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
123-202 |
1.97e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 41.25 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 123 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCPND-RFYTIRYREKDKEKKWIFQICPATET--IVENLKPNTVYEF 199
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 2462588872 200 GVK 202
Cdd:pfam00041 72 RVQ 74
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
768-853 |
2.10e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.04 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 768 DFGPITPGTSSAPTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRPriPQTQPVPKVPQRVTAKPKTS 847
Cdd:PRK12270 35 DYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAA--AAAPAAPPAAAAAAAPAAAA 112
|
....*.
gi 2462588872 848 PSPEVS 853
Cdd:PRK12270 113 VEDEVT 118
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
778-1120 |
2.92e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.70 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 778 SAPTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQT------PR-------------------APPKPKTSPRP----RIP 828
Cdd:PHA03247 2490 FAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPvgepvhPRmltwirgleelasddagdpPPPLPPAAPPAapdrSVP 2569
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 829 QTQPVPKVPQ-RVTAKPKTSPSPEVSYTTPAPKDvllPHKPYPEVSQSEPAPLETRGiPFIPMISPSPSQEELQTTLEET 907
Cdd:PHA03247 2570 PPRPAPRPSEpAVTSRARRPDAPPQSARPRAPVD---DRGDPRGPAPPSPLPPDTHA-PDPPPPSPSPAANEPDPHPPPT 2645
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 908 DQSTQEPFTTKIPRTTELAKTTQAPHR-FYTTVRPRTSDKPHIRPGVKQ--------APRPSGADRNVSVDSTHPTKKPG 978
Cdd:PHA03247 2646 VPPPERPRDDPAPGRVSRPRRARRLGRaAQASSPPQRPRRRAARPTVGSltsladppPPPPTPEPAPHALVSATPLPPGP 2725
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 979 TRRPPLPPRPTHPRRKPLPPNnvtgkpGSAGIISSGPITTPPLRSTPRPTGTPLERIETDIKQPTVPASGeelenitdfS 1058
Cdd:PHA03247 2726 AAARQASPALPAAPAPPAVPA------GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA---------S 2790
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462588872 1059 SSPTRETDPLgkPRFKGPHVRYIQKPDNS-PCSITDSVKRFPKEEATEGNATSPPQNPPTNLT 1120
Cdd:PHA03247 2791 LSESRESLPS--PWDPADPPAAVLAPAAAlPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLP 2851
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
319-713 |
3.31e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 319 PAESKTPEvekisARPttvtPETVPRSTKPTTSSALDVSETTLVLSKRTPETLQTILIPQFELPLSTLAPKSLPEfpeak 398
Cdd:PHA03247 2702 PPPPPTPE-----PAP----HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPP----- 2767
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 399 TPFPFEKPRGTLASSEKPWIVPTAKISEDSKVLQPQTATYDVFSSPTTSDEPeisdsytaTSDRILDSIPPKTSRTLEQP 478
Cdd:PHA03247 2768 APAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALP--------PAASPAGPLPPPTSAQPTAP 2839
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 479 RATLAPSETPFVPQKLEIFTSPEMQptTPAPQQTTSIPSTPKRRPRPKPPRTKPERTTSAGTItPKISKSPEPTWTTPAP 558
Cdd:PHA03247 2840 PPPPGPPPPSLPLGGSVAPGGDVRR--RPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFAL-PPDQPERPPQPQAPPP 2916
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 559 GKTQFISLKPKIPLSPevthtkPAPEPQTLLPSQSTIGPETPGTKPSTTLAPRKTKRPGRRPRPRPRPKTTPSPEVPKSK 638
Cdd:PHA03247 2917 PQPQPQPPPPPQPQPP------PPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPA 2990
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462588872 639 PALEPATIQPEPLVPTTASKPSERPKTTHRPDApqiqpgskpPKQLLPKPQTTAEPDmPPTKSVSEPVPFETEAP 713
Cdd:PHA03247 2991 SSTPPLTGHSLSRVSSWASSLALHEETDPPPVS---------LKQTLWPPDDTEDSD-ADSLFDSDSERSDLEAL 3055
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
317-602 |
3.50e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 44.95 E-value: 3.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 317 ALPAESKTPEVEKISArPTTVTPETvPRSTKPTTSSALDVSETTLVLSKRTPETLQTIlipqfelPLSTLAPKSLPEFPE 396
Cdd:pfam17823 129 SLPAAIAALPSEAFSA-PRAAACRA-NASAAPRAAIAAASAPHAASPAPRTAASSTTA-------ASSTTAASSAPTTAA 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 397 AKTPFPFEKPRGTLASS----EKPWIVPTAKISEDSKVLQPQTATYDVFSSPTTSDEPEISDSYTATSDRILDSIPPKTS 472
Cdd:pfam17823 200 SSAPATLTPARGISTAAtatgHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARR 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 473 RTLEQPRATLAPSETPFVPQKLEIfTSPEMQPTTPAP-QQTTSIPSTPKRRPRPKPPRTKPERTTSAGTITPKISKSPEP 551
Cdd:pfam17823 280 LSPAKHMPSDTMARNPAAPMGAQA-QGPIIQVSTDQPvHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEP 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2462588872 552 TwTTPAPgktqfislKPKIPLSPEVTHTKPAPEPQTLLPSQSTIGPETPGT 602
Cdd:pfam17823 359 S-ASPVP--------VLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGILLA 400
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
712-895 |
4.91e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 4.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 712 APSMTIVPTTDIEPVTVRTEAT--VTTLAPKTSQRTRTRRPRPKHKTTPRPETLQTKLDFGPITPGTSSAPTtttkrtrr 789
Cdd:PRK12323 380 APVAQPAPAAAAPAAAAPAPAAppAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA-------- 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 790 phPKPKTTPHPEVPqtklAPKQTPRAPPKPKTSPRPR---IPQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLPH 866
Cdd:PRK12323 452 --PAPAAAPAAAAR----PAAAGPRPVAAAAAAAPARaapAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAES 525
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2462588872 867 KPYPEVSQSEP-----------APLETRGIPFIPMISPSP 895
Cdd:PRK12323 526 IPDPATADPDDafetlapapaaAPAPRAAAATEPVVAPRP 565
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
639-707 |
4.94e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.42 E-value: 4.94e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462588872 639 PALEPATIQPEPLVPTtASKPSERPKTTHRPDAPQIQPGSKPPKQLLPKPQTTAEPDMPPTKSVSEPVP 707
Cdd:PRK14950 362 PVPAPQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAP 429
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
565-901 |
4.95e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 44.76 E-value: 4.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 565 SLKPKIPLSPEVTHTKPAPEPQTLLPSQSTIGPETPGTKPSTTLAPRKTKRPGRRPRPRPRPKTTPSPEVPKSKPALEP- 643
Cdd:pfam03154 143 STSPSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTq 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 644 ATIQPEPLVPTTASKPSERPKTTHRPDAPQIQPGSKPPKQLLPKPQTTAEPDMPPT--------KSVSEPVPFE----TE 711
Cdd:pfam03154 223 STAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPPMphslqtgpSHMQHPVPPQpfplTP 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 712 APSMTIVPTTDIEPVTVRTEATVTTLAPKTSQRTRTRRPRPKHKTTPRPETLQTKLDFGPITPGTSSAPTTTTKRTRRPH 791
Cdd:pfam03154 303 QSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPS 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 792 PKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQR--VTAKPKTSPSPEVSYTTPAPKDVLLPHKPY 869
Cdd:pfam03154 383 PFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQppVLTQSQSLPPPAASHPPTSGLHQVPSQSPF 462
|
330 340 350
....*....|....*....|....*....|..
gi 2462588872 870 PEVSQSEPAPLETRGiPFIPMISPSPSQEELQ 901
Cdd:pfam03154 463 PQHPFVPGGPPPITP-PSGPPTSTSSAMPGIQ 493
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
469-836 |
6.72e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 44.30 E-value: 6.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 469 PKTSRTLEQPRATLAP-----SETPFVPQKLEIFTSPE-----MQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPERTTSA 538
Cdd:PTZ00449 597 PKRPRSAQRPTRPKSPklpelLDIPKSPKRPESPKSPKrppppQRPSSPERPEGPKIIKSPKPPKSPKPPFDPKFKEKFY 676
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 539 GTITPKISKSPEpTWTTPAPGKTQFISLKPKIPLSPEVTHTKPAPepqtlLPSQSTIGPETPGTKPSTTLAPRktkrpgr 618
Cdd:PTZ00449 677 DDYLDAAAKSKE-TKTTVVLDESFESILKETLPETPGTPFTTPRP-----LPPKLPRDEEFPFEPIGDPDAEQ------- 743
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 619 rprprPRPKTTPSPEVPKSKPALEPATIQPEPLVPTTASKPSERPKTTHRPDAPQIQPGSkpPKQLLPKPqTTAEPDMPP 698
Cdd:PTZ00449 744 -----PDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDS--PSEHEDKP-PGDHPSLPK 815
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 699 TKSVSE-----PVPFETEAPSMTIVPTTdiEPVTVRTEATVTTLApktsqrtrtrrprpkhkttprpeTLQTKLDFGPIT 773
Cdd:PTZ00449 816 KRHRLDglalsTTDLESDAGRIAKDASG--KIVKLKRSKSFDDLT-----------------------TVEEAEEMGAEA 870
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462588872 774 PGTSSAPTTTTKRTRRPHPkPKTTPHPEVPQTKlaPKQTPRAPPKPKTSPRPRIPQTQPVPKV 836
Cdd:PTZ00449 871 RKIVVDDDGTEADDEDTHP-PEEKHKSEVRRRR--PPKKPSKPKKPSKPKKPKKPDSAFIPSI 930
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
123-202 |
7.38e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.17 E-value: 7.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 123 KPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcpndrFYTIRYREKDKE--KKWIFQICPATETIVENLKPNTVYEFG 200
Cdd:cd00063 3 PPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFR 73
|
..
gi 2462588872 201 VK 202
Cdd:cd00063 74 VR 75
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
771-860 |
9.23e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.30 E-value: 9.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 771 PITPGTSSAPTTTTKRTRRPHPKPKTTPHPEVPqtkLAPKQTPRAPPKPKtsPRPRiPQTQPVPKVPQRVTAKPKTSPSP 850
Cdd:PRK11633 64 PTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTP---VEPEPAPVEPPKPK--PVEK-PKPKPKPQQKVEAPPAPKPEPKP 137
|
90
....*....|
gi 2462588872 851 EVSyTTPAPK 860
Cdd:PRK11633 138 VVE-EKAAPT 146
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
767-899 |
9.47e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.92 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 767 LDFGPITP--GTSSAPTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSP-RPRIPQTQPV----PKVPQR 839
Cdd:PRK10263 736 LDDGPHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPqQPVAPQPQYQqpqqPVAPQP 815
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462588872 840 VTAKPKTSPSPEVSY------TTPAPKDVLLpHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEE 899
Cdd:PRK10263 816 QYQQPQQPVAPQPQYqqpqqpVAPQPQDTLL-HPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVE 880
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
597-847 |
1.02e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.22 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 597 PETPGTK----PSTTLAPRKTKRPGRRPRPRPRPKTTPSPEVPKSKPALEPATIQPEPLVPTTASKPseRPKTTHRPDAP 672
Cdd:NF033839 284 PKEPGNKkpsaPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETP--KPEVKPQPEKP 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 673 QIQPGSKPPKqllPKPQTTAEPDMPPTKSVSEPVPFETEAPSMTIVPTTDIEPVTVRTEATVTTLAPKTSQRTRTRRPRP 752
Cdd:NF033839 362 KPEVKPQPEK---PKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKP 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 753 KHKTTPRPETLQTKLDFGPITPGTSSAPTTTTkrtrrphPKPKTTPHPEVPQTKLA-PKQTPRAPPKPKTSPRPRIPQTQ 831
Cdd:NF033839 439 KPEVKPQPEKPKPEVKPQPETPKPEVKPQPEK-------PKPEVKPQPEKPKPDNSkPQADDKKPSTPNNLSKDKQPSNQ 511
|
250
....*....|....*.
gi 2462588872 832 PVPKvpQRVTAKPKTS 847
Cdd:NF033839 512 ASTN--EKATNKPKKS 525
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
467-825 |
1.04e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 43.60 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 467 IPPKTSRTLEQPRATLAP-SETPFVPQKLEIFTSPEMQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPERTTSAGTITPKI 545
Cdd:pfam03154 182 SPPSPPPPGTTQAATAGPtPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQV 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 546 SKSPEPTWTTPAPGKTQFISLKPKIPLSPEVTHTKPAPEPQTLLPSQSTIGPETPGTKPSTTLAprKTKRPGRRPRPRPR 625
Cdd:pfam03154 262 SPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRI--HTPPSQSQLQSQQP 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 626 PKTTPSPEVPKSKPALEPATIQPEPLVPTTASKpsERPKTTHRPDAPQIQPGSKPPKQLlpKPQTTAEPDMPPTksvSEP 705
Cdd:pfam03154 340 PREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSH--KHPPHLSGPSPFQMNSNLPPPPAL--KPLSSLSTHHPPS---AHP 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 706 VPFETEAPSMTIVPTTDIEPVTVRTEATVTTLA----PKTSQRTRTRRPRPKHKTTPRPETLQTKldfgPITPGTSSAPT 781
Cdd:pfam03154 413 PPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAAshppTSGLHQVPSQSPFPQHPFVPGGPPPITP----PSGPPTSTSSA 488
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2462588872 782 TTTKRTRRPHPKPKTTPHPEVPQTKLAPKQT----------PRAPPKPKTSPRP 825
Cdd:pfam03154 489 MPGIQPPSSASVSSSGPVPAAVSCPLPPVQIkeealdeaeePESPPPPPRSPSP 542
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
771-961 |
1.32e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.14 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 771 PITPGTSSAPTTTTKRTRRPHPK-------PKTTPHPEVPQTKLAP--KQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVT 841
Cdd:PTZ00449 591 PEEPKKPKRPRSAQRPTRPKSPKlpelldiPKSPKRPESPKSPKRPppPQRPSSPERPEGPKIIKSPKPPKSPKPPFDPK 670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 842 AKPK--------------TSPSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLE---TRGIPFIPM---ISPSPSQEELQ 901
Cdd:PTZ00449 671 FKEKfyddyldaaakskeTKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKlprDEEFPFEPIgdpDAEQPDDIEFF 750
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462588872 902 TTLEETDQSTQE-PFTTKIPR-TTELAKTTQaphrfyTTVRPRTSDKPHIRPG--VKQAPRPSG 961
Cdd:PTZ00449 751 TPPEEERTFFHEtPADTPLPDiLAEEFKEED------IHAETGEPDEAMKRPDspSEHEDKPPG 808
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
638-848 |
2.19e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 42.36 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 638 KPALEPATIQPEPLVPTTASKPSERPKTTHRPDAPQIQ---PGSKPPKQ----LLPKPQTTAE-------------PDMP 697
Cdd:PHA03378 575 QPLTSPTTSQLASSAPSYAQTPWPVPHPSQTPEPPTTQshiPETSAPRQwpmpLRPIPMRPLRmqpitfnvlvfptPHQP 654
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 698 PTKSVSEPVPFETEAPSMTIVPTT---------DIEPVTVRTEATVTT-LAPKTSQRTRTRRPRPKHKTTPRPETLQTKL 767
Cdd:PHA03378 655 PQVEITPYKPTWTQIGHIPYQPSPtgantmlpiQWAPGTMQPPPRAPTpMRPPAAPPGRAQRPAAATGRARPPAAAPGRA 734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 768 DFGPITPGTSSAPTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTS 847
Cdd:PHA03378 735 RPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAA 814
|
.
gi 2462588872 848 P 848
Cdd:PHA03378 815 P 815
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
770-974 |
2.53e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.17 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 770 GPITPGTSSAPTTTTKRTRRPHPKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTSPS 849
Cdd:PRK12323 370 GGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPA 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 850 PE---VSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPfIPMISPSPSQEELQTTLEETDQSTQEPFTTKIPRTTELA 926
Cdd:PRK12323 450 PApapAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAP-APADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPD 528
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2462588872 927 KTTQAPHRFYTTVRPRTSDKPHIRPGVKQAPRPSGADRNVSVDSTHPT 974
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDM 576
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
568-794 |
2.53e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.17 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 568 PKIPLSPEVTHTKPAPEPQTLLPSQSTIGPETPGTKPSTTLAPRktkrpgrrprprprpKTTPSPEVPKSKPALEPATIQ 647
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAAR---------------AVAAAPARRSPAPEALAAARQ 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 648 PEPLVPTTASKPSERPKTTHRPDAPQIQPGSKPPKQLLPKPQTTAEPDMPPTKSVSEPVPFETEAPSMTIVPTTDIEPVT 727
Cdd:PRK12323 439 ASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462588872 728 VRTEAtvttlapktsqrtrtrrprpkhKTTPRPETLQTKLDFGPITPGTSSAPTTTTKRTRRPHPKP 794
Cdd:PRK12323 519 AGWVA----------------------ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAP 563
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
771-859 |
2.89e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.10 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 771 PITPGTSSAPTTTTKRTRRPHPKPKTTPHPEVPQTklAPKQTPRAPPKPKTSPRPRiPQTQPVPKVPQRVTAKPKTSPSP 850
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAAN--IPPKEPVRETATPPPVPPR-PVAPPVPHTPESAPKLTRAAIPV 438
|
....*....
gi 2462588872 851 EVSYTTPAP 859
Cdd:PRK14950 439 DEKPKYTPP 447
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
792-879 |
3.11e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 41.76 E-value: 3.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 792 PKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRPripQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPYPE 871
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSA---VALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAPE 341
|
....*...
gi 2462588872 872 VSQSEPAP 879
Cdd:COG3266 342 AAAAAAAP 349
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
540-774 |
3.17e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 41.99 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 540 TITPKIskSPEPTWTTPAPGKTQfislkpkiplsPEVTHTKPAPEPQTLLPSQSTIGPETPGTKPSTTLAPRKTKRPGRR 619
Cdd:PRK10263 368 TGEPVI--APAPEGYPQQSQYAQ-----------PAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYY 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 620 PRPRPRPKTTPSPEVPKSKPALEP-ATIQPEPLV--PTTASKPSERPKTTHRPDAPQIQPG------SKPP--------- 681
Cdd:PRK10263 435 APAPEQPVAGNAWQAEEQQSTFAPqSTYQTEQTYqqPAAQEPLYQQPQPVEQQPVVEPEPVveetkpARPPlyyfeevee 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 682 ------KQLLPKPQTTAEPDMPPtksvsEPVPFETEAPSMTIVPTTDIEPVTVRTEATV--TTLAPKTSQRTRTRRPRPK 753
Cdd:PRK10263 515 krarerEQLAAWYQPIPEPVKEP-----EPIKSSLKAPSVAAVPPVEAAAAVSPLASGVkkATLATGAAATVAAPVFSLA 589
|
250 260
....*....|....*....|.
gi 2462588872 754 HKTTPRPetlQTKLDFGPITP 774
Cdd:PRK10263 590 NSGGPRP---QVKEGIGPQLP 607
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
790-860 |
3.94e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.54 E-value: 3.94e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462588872 790 PHPKPKTTPHPEVPqtklAPKqtpraPPKPKTSPRPRIPQTQ--------PVPKVPQRVTAKPktSPSPEVSYTTPAPK 860
Cdd:NF033838 418 EQPQPAPAPQPEKP----APK-----PEKPAEQPKAEKPADQqaeedyarRSEEEYNRLTQQQ--PPKTEKPAQPSTPK 485
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
642-743 |
3.98e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.08 E-value: 3.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 642 EPATIQP---EPLVPTTASKPSERPKTTHRPDAPQIQPGSKppkqllpKPQTTAE-PDMPPTKSVSEPVPFETEAPSMTI 717
Cdd:PRK10905 126 EPATVAPvrnGNASRQTAKTQTAERPATTRPARKQAVIEPK-------KPQATAKtEPKPVAQTPKRTEPAAPVASTKAP 198
|
90 100
....*....|....*....|....*.
gi 2462588872 718 VPTTDIEPVTVRTEATVTTLAPKTSQ 743
Cdd:PRK10905 199 AATSTPAPKETATTAPVQTASPAQTT 224
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
774-879 |
4.24e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 4.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 774 PGTSSAPTTTTKRTRRPHPKPKTT----PHPEVPQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVtakpktsPS 849
Cdd:PRK14951 375 PAEKKTPARPEAAAPAAAPVAQAAaapaPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV-------AL 447
|
90 100 110
....*....|....*....|....*....|..
gi 2462588872 850 PEVSYTTPAPKDVLLPHK--PYPEVSQSEPAP 879
Cdd:PRK14951 448 APAPPAQAAPETVAIPVRvaPEPAVASAAPAP 479
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
631-825 |
6.04e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.12 E-value: 6.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 631 SPEVPKSKPALEPATIQPEPLVPTTASKPsERPKTTHRPDAPQIQPGSKPPKQLLPKPQTTAEPDMPPTKSVS-EPVPFE 709
Cdd:PRK07764 596 GGEGPPAPASSGPPEEAARPAAPAAPAAP-AAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDgWPAKAG 674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 710 TEAPSMTIVPTTDIEPVTVRTEATvttlapktsqrtrtRRPRPKHKTTPRPETLQTKLDFGPITPGTSSAPTTTTKRTRR 789
Cdd:PRK07764 675 GAAPAAPPPAPAPAAPAAPAGAAP--------------AQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVP 740
|
170 180 190
....*....|....*....|....*....|....*.
gi 2462588872 790 PHPKPKTTPHPEVPQTKLAPKQTPRAPPKPKTSPRP 825
Cdd:PRK07764 741 LPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPP 776
|
|
| Orthopox_A5L |
pfam06193 |
Orthopoxvirus A5L protein-like; This family includes several Orthopoxvirus A5L proteins. The ... |
804-924 |
7.40e-03 |
|
Orthopoxvirus A5L protein-like; This family includes several Orthopoxvirus A5L proteins. The vaccinia virus WR A5L open reading frame (corresponding to open reading frame A4L in vaccinia virus Copenhagen) encodes an immunodominant late protein found in the core of the vaccinia virion. The A5 protein appears to be required for the immature virion to form the brick-shaped intracellular mature virion.
Pssm-ID: 283778 [Multi-domain] Cd Length: 216 Bit Score: 39.58 E-value: 7.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 804 QTKLAPKQTPRAPPKPKTSPRP-RIPQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLET 882
Cdd:pfam06193 61 DNMLAASRQPIQPLQPTIHITPiEIPTPAPTPKPRQQELGTPSTSCTQNSDASIACSTDIVTPPQPPIVATVCTPTPTDG 140
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2462588872 883 RgIPFIPMISPSP---SQEELQTTLEETDQSTQEPFTTKIPRTTE 924
Cdd:pfam06193 141 R-ICTTADQNPNPgatIQKELDNMALKDLMSSVEKDMCQLQAESE 184
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
444-832 |
9.67e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 40.28 E-value: 9.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 444 PTTSDEPEISDSYTATSDriLDSIPPKTSRTLEQPratLAPSETPF---VPQKLEIFTSPEMQPTTPAPQQTTSIPSTPK 520
Cdd:pfam05109 455 PTNLTAPASTGPTVSTAD--VTSPTPAGTTSGASP---VTPSPSPRdngTESKAPDMTSPTSAVTTPTPNATSPTPAVTT 529
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 521 RRPRPKPPRTKPERTTSAGTITPKISKSPEPTWTTPAPGKTqFISLKPKIPLSPEVTHTKPAPEPQTLLPS-QSTIGPET 599
Cdd:pfam05109 530 PTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNAT-IPTLGKTSPTSAVTTPTPNATSPTVGETSpQANTTNHT 608
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 600 PGTKPSTTLAPRKTKRPGRRPRPRPRPKTTPSPEVPKSKPALEPATIQPEPLVPTTASKP---SERPktTHRPDAPQIQP 676
Cdd:pfam05109 609 LGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPlltSAHP--TGGENITQVTP 686
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 677 GSKPPKQL-----LPKPQTTAEPDMPPTKSVS-EPVPFETEAPSMTIVPTTDIEPVTVRTEATVTTLAPKTSQRTRTRRP 750
Cdd:pfam05109 687 ASTSTHHVstsspAPRPGTTSQASGPGNSSTStKPGEVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKH 766
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 751 RPKH--KTTPRPETlqtklDFGpitpGTSSAPTTTTKRtrrphpkpkTTPHPEVPQTKLAPKQTPRAPP-KPKTSPRPRI 827
Cdd:pfam05109 767 TTGHgaRTSTEPTT-----DYG----GDSTTPRTRYNA---------TTYLPPSTSSKLRPRWTFTSPPvTTAQATVPVP 828
|
....*
gi 2462588872 828 PQTQP 832
Cdd:pfam05109 829 PTSQP 833
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
662-1031 |
9.90e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.44 E-value: 9.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 662 RPKTTHRPDAPQIQPGSKPPKQLLPKPQTTAEPDmpPTKSVSEPVPFETEAPsmtiVPTTDIEPVTVRTEATVTTLAPKT 741
Cdd:PHA03378 431 RKKKAARTEQPRATPHSQAPTVVLHRPPTQPLEG--PTGPLSVQAPLEPWQP----LPHPQVTPVILHQPPAQGVQAHGS 504
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 742 sqrtrTRRPRPKHKTTPRPETLQTKLDFGPITP-GTSSAPTTTTKRTRRPHPKPKTTpHPEVPQTKLAPKQTPRAPpKPK 820
Cdd:PHA03378 505 -----MLDLLEKDDEDMEQRVMATLLPPSPPQPrAGRRAPCVYTEDLDIESDEPAST-EPVHDQLLPAPGLGPLQI-QPL 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 821 TSPRPRIPQTQpVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEEL 900
Cdd:PHA03378 578 TSPTTSQLASS-APSYAQTPWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQ 656
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462588872 901 QTTLEETDQSTQEPFTTKIPRTTELAK---------TTQAPHRFYTTVRPrtsdkPHIRPGVKQapRPSGADRNVSVDST 971
Cdd:PHA03378 657 VEITPYKPTWTQIGHIPYQPSPTGANTmlpiqwapgTMQPPPRAPTPMRP-----PAAPPGRAQ--RPAAATGRARPPAA 729
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462588872 972 HPTK-KPGTRRPPLPPRPTHPRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPRPTGTP 1031
Cdd:PHA03378 730 APGRaRPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRP 790
|
|
| |
