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Conserved domains on  [gi|270265839|ref|NP_000264|]
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G-protein coupled receptor 143 [Homo sapiens]

Protein Classification

Ocular_alb domain-containing protein( domain architecture ID 10489293)

Ocular_alb domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Ocular_alb pfam02101
Ocular albinism type 1 protein;
1-395 0e+00

Ocular albinism type 1 protein;


:

Pssm-ID: 460446  Cd Length: 402  Bit Score: 751.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839    1 MASPRLGTFCCPTRDAATQLVLSFQPRAFHALCLGSGGLRLALGLLQLLPGRRPAGPG----SPATSPPASVRILRAAAA 76
Cdd:pfam02101   1 MASPRLETFCCPTRDAATQLVLSFQPRAFHALCLGSGALRLLLGLLQLLPKRRHAGPRrlgqYPATSPAASVRILRAATA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839   77 CDLLGCLGMVIRSTVWLGFPNFVDSVSDMNHTEIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILL 156
Cdd:pfam02101  81 CDLLGCLGIVIRSTVWLGFPDFIENISLVNGTDIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  157 YHIMAWGLATLLCVEGAAMLYYPSVSRCERGLDHAIPHYVTMYLPLLLVLVANPILFQKTVTAVASLLKGRQGIYTENER 236
Cdd:pfam02101 161 YHMMTWGLALLLCVEGVAMLYYPSVSRCERGLEHAIPHYVTTYLPLLLVLVANPILFRKTVTAVASLLKGRQGIYTENER 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  237 RMGAVIKIRFFKIMLVLIICWLSNIINESLLFYLEMQTDINGGSLKPVRTAAKTTWFIMGILNPAQGFLLSLAFYGWTGC 316
Cdd:pfam02101 241 RMGAVIKIRFFKIMLVFIICWLSNIINESLLFYLEMQPDINGSSLKDVRNAALITWFIMGILNPAQGFLLSLAFYGWTGC 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  317 SLGFQSPRKEIQWESLTTSAAEGAHPSP---LMPHENPASGKVSQVGGQTSDEALSMLSEGSDASTIEIHTASESCNKNE 393
Cdd:pfam02101 321 SLDLSFPSKEIQWESLSTSAAEGAHPSPvgsLLPYESPAAKKTSPGGGHTSDEALSILSEGSDASTIEIHIASGSRNLNE 400

                  ..
gi 270265839  394 GD 395
Cdd:pfam02101 401 VD 402
 
Name Accession Description Interval E-value
Ocular_alb pfam02101
Ocular albinism type 1 protein;
1-395 0e+00

Ocular albinism type 1 protein;


Pssm-ID: 460446  Cd Length: 402  Bit Score: 751.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839    1 MASPRLGTFCCPTRDAATQLVLSFQPRAFHALCLGSGGLRLALGLLQLLPGRRPAGPG----SPATSPPASVRILRAAAA 76
Cdd:pfam02101   1 MASPRLETFCCPTRDAATQLVLSFQPRAFHALCLGSGALRLLLGLLQLLPKRRHAGPRrlgqYPATSPAASVRILRAATA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839   77 CDLLGCLGMVIRSTVWLGFPNFVDSVSDMNHTEIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILL 156
Cdd:pfam02101  81 CDLLGCLGIVIRSTVWLGFPDFIENISLVNGTDIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  157 YHIMAWGLATLLCVEGAAMLYYPSVSRCERGLDHAIPHYVTMYLPLLLVLVANPILFQKTVTAVASLLKGRQGIYTENER 236
Cdd:pfam02101 161 YHMMTWGLALLLCVEGVAMLYYPSVSRCERGLEHAIPHYVTTYLPLLLVLVANPILFRKTVTAVASLLKGRQGIYTENER 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  237 RMGAVIKIRFFKIMLVLIICWLSNIINESLLFYLEMQTDINGGSLKPVRTAAKTTWFIMGILNPAQGFLLSLAFYGWTGC 316
Cdd:pfam02101 241 RMGAVIKIRFFKIMLVFIICWLSNIINESLLFYLEMQPDINGSSLKDVRNAALITWFIMGILNPAQGFLLSLAFYGWTGC 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  317 SLGFQSPRKEIQWESLTTSAAEGAHPSP---LMPHENPASGKVSQVGGQTSDEALSMLSEGSDASTIEIHTASESCNKNE 393
Cdd:pfam02101 321 SLDLSFPSKEIQWESLSTSAAEGAHPSPvgsLLPYESPAAKKTSPGGGHTSDEALSILSEGSDASTIEIHIASGSRNLNE 400

                  ..
gi 270265839  394 GD 395
Cdd:pfam02101 401 VD 402
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
82-310 5.06e-13

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 68.39  E-value: 5.06e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  82 CLGMVIRSTVWLGFPNFVDSVSDmnhteiwpaAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLST---ILLYH 158
Cdd:cd13952   44 CLSLLLAQLLFLIGQLLTSSDRP---------VLCKALAILLHYFLLASFFWMLVEAFDLYRTFVKVFGSSErrrFLKYS 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 159 IMAWGLATLLCVEGAAMLYYPSVSRCERG-----LDHAIPHYVTMYLPLLLVLVANPILFqktVTAVASLLKGRQGIYTE 233
Cdd:cd13952  115 LYGWGLPLLIVIITAIVDFSLYGPSPGYGgeycwLSNGNALLWAFYGPVLLILLVNLVFF---ILTVRILLRKLRETPKQ 191
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 270265839 234 NERRMGAVIKIRFFKIMLVLIICWLSniinesllfylemqtdingGSLKPVRTAAKTTWFIMGILNPAQGFLLSLAF 310
Cdd:cd13952  192 SERKSDRKQLRAYLKLFPLMGLTWIF-------------------GILAPFVGGSLVFWYLFDILNSLQGFFIFLIF 249
 
Name Accession Description Interval E-value
Ocular_alb pfam02101
Ocular albinism type 1 protein;
1-395 0e+00

Ocular albinism type 1 protein;


Pssm-ID: 460446  Cd Length: 402  Bit Score: 751.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839    1 MASPRLGTFCCPTRDAATQLVLSFQPRAFHALCLGSGGLRLALGLLQLLPGRRPAGPG----SPATSPPASVRILRAAAA 76
Cdd:pfam02101   1 MASPRLETFCCPTRDAATQLVLSFQPRAFHALCLGSGALRLLLGLLQLLPKRRHAGPRrlgqYPATSPAASVRILRAATA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839   77 CDLLGCLGMVIRSTVWLGFPNFVDSVSDMNHTEIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILL 156
Cdd:pfam02101  81 CDLLGCLGIVIRSTVWLGFPDFIENISLVNGTDIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  157 YHIMAWGLATLLCVEGAAMLYYPSVSRCERGLDHAIPHYVTMYLPLLLVLVANPILFQKTVTAVASLLKGRQGIYTENER 236
Cdd:pfam02101 161 YHMMTWGLALLLCVEGVAMLYYPSVSRCERGLEHAIPHYVTTYLPLLLVLVANPILFRKTVTAVASLLKGRQGIYTENER 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  237 RMGAVIKIRFFKIMLVLIICWLSNIINESLLFYLEMQTDINGGSLKPVRTAAKTTWFIMGILNPAQGFLLSLAFYGWTGC 316
Cdd:pfam02101 241 RMGAVIKIRFFKIMLVFIICWLSNIINESLLFYLEMQPDINGSSLKDVRNAALITWFIMGILNPAQGFLLSLAFYGWTGC 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  317 SLGFQSPRKEIQWESLTTSAAEGAHPSP---LMPHENPASGKVSQVGGQTSDEALSMLSEGSDASTIEIHTASESCNKNE 393
Cdd:pfam02101 321 SLDLSFPSKEIQWESLSTSAAEGAHPSPvgsLLPYESPAAKKTSPGGGHTSDEALSILSEGSDASTIEIHIASGSRNLNE 400

                  ..
gi 270265839  394 GD 395
Cdd:pfam02101 401 VD 402
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
82-310 5.06e-13

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 68.39  E-value: 5.06e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839  82 CLGMVIRSTVWLGFPNFVDSVSDmnhteiwpaAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLST---ILLYH 158
Cdd:cd13952   44 CLSLLLAQLLFLIGQLLTSSDRP---------VLCKALAILLHYFLLASFFWMLVEAFDLYRTFVKVFGSSErrrFLKYS 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 159 IMAWGLATLLCVEGAAMLYYPSVSRCERG-----LDHAIPHYVTMYLPLLLVLVANPILFqktVTAVASLLKGRQGIYTE 233
Cdd:cd13952  115 LYGWGLPLLIVIITAIVDFSLYGPSPGYGgeycwLSNGNALLWAFYGPVLLILLVNLVFF---ILTVRILLRKLRETPKQ 191
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 270265839 234 NERRMGAVIKIRFFKIMLVLIICWLSniinesllfylemqtdingGSLKPVRTAAKTTWFIMGILNPAQGFLLSLAF 310
Cdd:cd13952  192 SERKSDRKQLRAYLKLFPLMGLTWIF-------------------GILAPFVGGSLVFWYLFDILNSLQGFFIFLIF 249
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
105-310 4.40e-07

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 51.07  E-value: 4.40e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 105 MNHTEIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLS-------TILLYHIMAWGLATLLCVEGAAMLY 177
Cdd:cd15039   57 GQLLSSGDSTLCVALGILLHFFFLAAFFWLNVMSFDIWRTFRGKRSSSsrskerkRFLRYSLYAWGVPLLLVAVTIIVDF 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 178 YPSVS---------RCerGLDHAIPHYVTMYLPLLLVLVANPILFQKTV---TAVASLLKGRQGIYTENERRMGAvikir 245
Cdd:cd15039  137 SPNTDslrpgygegSC--WISNPWALLLYFYGPVALLLLFNIILFILTAiriRKVKKETAKVQSRLRSDKQRFRL----- 209
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 270265839 246 FFKIMLVLIICWLSNIIneSLLFYlemqtdinggslkpvrtAAKTTWFIMGILNPAQGFLLSLAF 310
Cdd:cd15039  210 YLKLFVIMGVTWILEII--SWFVG-----------------GSSVLWYIFDILNGLQGVFIFLIF 255
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
108-306 2.53e-05

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 45.26  E-value: 2.53e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 108 TEIWPAAFCVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLST---ILLYHIMAWGLATLLCVEGAAM---LYYPSV 181
Cdd:cd15040   60 NSTDNPVLCTAVAALLHYFLLASFMWMLVEALLLYLRLVKVFGTYPrhfILKYALIGWGLPLIIVIITLAVdpdSYGNSS 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 182 SRCerGLDHAIPHYVTMYLPLLLVLVANPILFqktVTAVASLLKGRQGiyTENERRMGAVIKIR-FFKIMLVLIICWLSn 260
Cdd:cd15040  140 GYC--WLSNGNGLYYAFLGPVLLIILVNLVIF---VLVLRKLLRLSAK--RNKKKRKKTKAQLRaAVSLFFLLGLTWIF- 211
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 270265839 261 iineSLLFYLemqtdinggslkpvrTAAKTTWFIMGILNPAQGFLL 306
Cdd:cd15040  212 ----GILAIF---------------GARVVFQYLFAIFNSLQGFFI 238
7tmE_cAMP_R_Slime_mold cd14940
slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G ...
116-310 6.65e-05

slime mold cyclic AMP receptor, member of the class E family of seven-transmembrane G protein-coupled receptors; This family represents the class E of seven-transmembrane G-protein coupled receptors found in soil-living amoebas, commonly referred to as slime molds. The class E family includes cAMP receptors (cAR1-4) and cAMP receptors-like proteins (CrlA-C) from Dictyostelium discoideum, and their highly homologous cAMP receptors (TasA and TasB) from Polysphondylium pallidum. So far, four subtypes of cAMP receptors (cAR1-4) have been identified that play an essential role in the detection and transmit of the periodic extracellular cAMP waves that regulate chemotactic cell movement during Dictyostelium development, from the unicellular amoeba aggregate into many multicellular slugs and then differentiate into a sporocarp, a fruiting body with cells specialized for different functions. These four subtypes differ in their expression levels and patterns during development. cAR1 is high-affinity receptor that is the first one to be expressed highly during early aggregation and continues to be expressed at low levels during later developmental stages. cAR1 detects extracellular cAMP and is coupled to G-alpha2 protein. Cells lacking cAR1 fail to aggregate, demonstrating that cAR1 is responsible for aggregation. During later aggregation the high-affinity cAR3 receptor is expressed at low levels. Nonetheless, cells lacking cAR3 do not show an obviously altered pattern of development and are still able to aggregate into fruiting bodies. In contrast, cAR2 and cAR4 are low affinity receptors expressed predominantly after aggregation in pre-stalk cells. cAR2 is essential for normal tip formation and deletion of the receptor arrests development at the mound stage. On the other hand, CAR4 regulates axial patterning and cellular differentiation, and deletion of the receptor results in defects during culmination. Furthermore, three cAMP receptor-like proteins (CrlA-C) were identified in Dictyostelium that show limited sequence similarity to the cAMP receptors. Of these CrlA is thought to be required for normal cell growth and tip formation in developing aggregates.


Pssm-ID: 320094 [Multi-domain]  Cd Length: 256  Bit Score: 44.26  E-value: 6.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 116 CVGSAMWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTIL--LYHIMAWGLATLL-CVEGAAMLYYPSVSRCERGLDHAI 192
Cdd:cd14940   68 CYLYAIVITYGSLSCWLWTLCLAISIYLLIVKREPEPEKFekYYHFVCWGLPLIStIIMLIKHHYGPVGNWCWIGNQYTG 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 193 PHYVTMYLPLLLVLVANPILFqkTVTAVASLLKGRQGIYTENERRMGAVIKIRFFKImlVLIICWLSNIINESLlfylem 272
Cdd:cd14940  148 YRFGLFYGPFFIIFGISAVLV--GLTSHYTYQVIHNWVSDNKDLHKTYQFKLVNYII--VFLLCWIFAVINRIQ------ 217
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 270265839 273 qtdiNGGSLKPVRTAAKTTwfimgILNPAQGFLLSLAF 310
Cdd:cd14940  218 ----NALNPFPFALNLLHT-----YLSPSHGFYASVVF 246
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
114-223 9.37e-04

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 40.77  E-value: 9.37e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270265839 114 AFCVGSAMWIQLLYSACFWWLFCYAVDAYL-VIRRSAGLSTILLYHIMAWGLATLLCV--EGAAMLYYPSVSRCERGL-D 189
Cdd:cd15933   65 VACKVVAILLHFFFMAAFSWMLVEGLHLYLmIVKVFNYKSKMRYYYFIGWGLPAIIVAisLAILFDDYGSPNVCWLSLdD 144
                         90       100       110
                 ....*....|....*....|....*....|....
gi 270265839 190 HAIPHYVTmylPLLLVLVANPILFQKTVTAVASL 223
Cdd:cd15933  145 GLIWAFVG---PVIFIITVNTVILILVVKITVSL 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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