6NPY,6X6A


Conserved Protein Domain Family
NLRC4_HD2

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pfam17776: NLRC4_HD2 
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NLRC4 helical domain HD2
This entry represents a helical domain found in the NLRC4 protein and NOD2 protein.
Statistics
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PSSM-Id: 465499
Aligned: 81 rows
Threshold Bit Score: 70.7836
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6NPY_A        520 HMTFQEFFAAMYYLLEEEKEGRTnVPGSRLKLp----------sRD-V-------TVLLENYGKF-EKGY-LIFVVRFLF 579 
XP_003965935  515 HATLQSFLAAFALVLNEEAPPSSiLRFFTESRrrass---cqpfRCcIqd----sSKVITKASSS-ANEH-LQFTNLFLC 585 
XP_001519938  586 HVTFQCFLAALYLLLHGDVAPAAvGHLFHRPRksrvl--ellypRLcIpaarreeGRPGSLPWGA-ETVD-VQLTASFLA 661 
XP_003437591  579 HVTLQCFFAALFIVLSSNTNRSV-IPKLFELEnretgl-trvcfTAcLpss-dqqQQASEKESKAaETPN-LQITAMFVS 654 
XP_006002351  428 HITVQCFFAALYMAVNSNIGQSA-IYSLFKYRkktslv-itcmkPCfLste--ehEGRIDKQLQN-AERPnQEMTASFFA 502 
Q288C4        449 HTCIQEFCAAMFYMFTRPKDPPHsV---IGNV-----------------------TQLITRAVSG-HYSR-LSWTAVFLF 500  cattle
XP_008249972  443 HTPLQEFCAALFYFLGQPGDQLNpA--IGSIA------------------------QLVTATMGQ-LQSR-LYRMGIFLF 494 
XP_020950728  449 HLKIQEFCAAVGYMMLLSECQIPsA----NKKyp---------------------------eRRE-RYND-FSPITTSIF 495 
XP_016283939  575 HITLQCFFAAFYLLLGADVNPSA-IRCVFGGHkkphqplprlfpMAcFqspepeeESVLTLLQRA-ETHN-VRITAVFLA 651 
XP_029289633  629 HLTLQEFLAALKTMTSADVSDTQ-LKKRFSLRtrw-------mtK----------------S-DQ-RTLF-TDSLHLYVC 681  Cottoperca gobio
6NPY_A        580 GLVNQERTSYLEKKLS-C-----KISQQIRLE-LLKWIEVKAKAK-KLqiQ---------------PSQLELFYCLYEMQ 636 
XP_003965935  586 GLLAKANMGLIDLLAS-P-----NILKKKRSV-LKSYLSASVRSH-LQ--DvpqykssegskihglSRLLWLLRCIFETG 655 
XP_001519938  662 GLLSGTNFAPLAESHG-S-----EALLRKRAS-ARKCLARGIERH-FR--SippavpgelkslhalPAFLWLIKSLYEMQ 731 
XP_003437591  655 GLLSQRHQNLWLHCCP-S-----AAVEKKARQ-VARCLSKGIQKH-FR--SipqpvqgekksmhamPDFVWLIKCLYEMQ 724 
XP_006002351  503 GLLSQRHKSFLGELCQ-D-----KDLIKKYED-AKKCLENGMQKH-FH--SiptavleekksmhamPEFVWLIKCIYEMQ 572 
Q288C4        501 VFSTERMTHRLETSFG-F-----PLSKEIKQE-ITQSLDTLSQCD-PN--Nv-------------mMSFQALFNCLFETQ 557  cattle
XP_008249972  495 GICSGRITGMLGKWFG-M-----LLSEEIKPK-ISQCLQRLSKGE-PG--Ev--------------VNFQNLSSALFEIQ 550 
XP_020950728  496 GLLNEKRRKILETSIGcN-----LLTGELKKY-FLQKMKYVGDHP-KT--V---------------EHHTPLFYCLFENQ 551 
XP_016283939  652 GLLSQEHWRLVTECRGtS-----TPLLQKKSR-VRRCLARGLRRH-FR--SipravpgevksmhamPEFVWLIRSLYEMQ 722 
XP_029289633  682 GLASPLCTPALVQLARtPggsggESWVQKRQTlVLKLLKNLCQSNtLT--G---------------PKILELCHCVQESQ 744  Cottoperca gobio
6NPY_A        637 EEDFVQR 643 
XP_003965935  656 SKEIAQR 662 
XP_001519938  732 DEGLARR 738 
XP_003437591  725 ESRIAKD 731 
XP_006002351  573 SEKLAKD 579 
Q288C4        558 DPEFVAQ 564  cattle
XP_008249972  551 EREFVAQ 557 
XP_020950728  552 DEEFVKQ 558 
XP_016283939  723 DEHLARK 729 
XP_029289633  745 DHQLAKQ 751  Cottoperca gobio
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