6TAX,6TAY


Conserved Protein Domain Family
RING-HC_RNF213

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cd16561: RING-HC_RNF213 
Click on image for an interactive view with Cn3D
RING finger, HC subclass, found in RING finger protein 213 (RNF213) and similar proteins
RNF213, also known as ALK lymphoma oligomerization partner on chromosome 17 or Moyamoya steno-occlusive disease-associated AAA+ and RING finger protein (mysterin), is an intracellular soluble protein that functions as an E3 ubiquitin-protein ligase and AAA+ ATPase, which possibly contributes to vascular development through mechanical processes in the cell. It plays a unique role in endothelial cells for proper gene expression in response to inflammatory signals from the environment. Mutations in RNF213 may be associated with Moyamoya disease (MMD), an idiopathic cerebrovascular occlusive disorder prevalent in East Asia. It also acts as a nuclear marker for acanthomorph phylogeny. RNF213 contains two tandem enzymatically active AAA+ ATPase modules and a C3HC4-type RING-HC finger. It can form a huge ring-shaped oligomeric complex.
Statistics
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PSSM-Id: 438223
Aligned: 21 rows
Threshold Bit Score: 77.7022
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Structure:6TAX; Mus musculus RNF213 binds two Zn2+ ions through its RING-HC finger
    View structure with Cn3D
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #  #                                                                        
6TAX_A       3420 GIQPCFICHGDa-------------------------------------------------------------------- 3431 house mouse
XP_001429539    3 LQENCSICFEDy-------------------------------------------------------------------- 14   Paramecium te...
XP_012898385  168 GNACCPICMETv-------------------------------------------------------------------- 179 
CUF98884      116 DHPECPICQEDfssk----------------------------------------------------------------- 130 
XP_002780979  105 NNQECSICLEPqhv------------------------------------------------------------------ 118  Perkinsus mar...
XP_005840660   83 GDGECAICQSDl-------------------------------------------------------------------- 94   Guillardia th...
P22470        161 EGPLCSICYDEyedevdstkakrkrdseneeesegtkkrkdnegaplrttadndsnpsitnatvveppsiplteqqrtln 240  Saccharomyces...
XP_028890609  201 REESCSICFEQfedvvassdcidddcvtkkrktnsres--------------------------tpsaatsnerdankqt 254 
XP_002673800  368 GEAECSICLQPf-------------------------------------------------------------------- 379  Naegleria gru...
XP_656690     315 EDKMCLICQDTv-------------------------------------------------------------------- 326  Entamoeba his...
Feature 1                         # #  #  #              #  #        
6TAX_A       3432 ---------qDPVCLPCDHVYCLRCIQTWLi---PGQMMCPYCLTDLPDKF 3470 house mouse
XP_001429539   15 ---------vDPIKLPCNHIFCRDCIVVAL----EQRQSCPICRRLCCNYI 52   Paramecium tetraurelia strain d4-2
XP_012898385  180 ---------kYPTKLPCDHVFCETCIAQWL----ETNQTCPVCRSKLNRSG 217 
CUF98884      131 -------kdeFATRLPCDHVFCVGCLRKWL----ESSRTCPVCRLELVDVE 170 
XP_002780979  119 --------gnKATKLPCGHIFCSGCIVPWL----RKNCTCPVCRYELPTND 157  Perkinsus marinus ATCC 50983
XP_005840660   95 ---------hAPVKLVCGHIFCDDCVMQWLer-sLIDGTCPLCRQVVQPAA 135  Guillardia theta CCMP2712
P22470        241 deetnpsykhSPIKLPCGHIFGRECIYKWS----RLENSCPLCRQKISESV 287  Saccharomyces cerevisiae S288C
XP_028890609  255 lntcgidwkhVPVKLPCGHIFGQSCLAHWL----NDNRSCPLCRVNLSDET 301 
XP_002673800  380 ---------nRPVKLGCNHIYCEQCITEWAssgnQTATQCPVCRTAISGVP 421  Naegleria gruberi strain NEG-M
XP_656690     327 ---------nRPIKLKCGHVYCEECIFKWL----IQQPRCPMCRELVIQPQ 364  Entamoeba histolytica HM-1:IMSS

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