Conserved Protein Domain Family
Filament

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pfam00038: Filament (this model, PSSM-Id:425436 is obsolete and has been replaced by 459643)
Intermediate filament protein
Statistics
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PSSM-Id: 425436
Aligned: 27 rows
Threshold Bit Score: 314.161
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P13648   30 EKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVV-SREVSGIKAAYEAELADARKTLDSVAKERARLQLELSKV 108  chicken
P19013  137 EREQIKLLNNKFASFIDKVQFLEQQNKVLETKWNLLQQQTtTTSSKNLEPLFETYLSVLRKQLDTLGNDKGRLQSELKTM 216  human
Q01546  183 EREQIKTLNNKFASFIDKVRFLEQQNKVLETKWELLQQQTtGSGPSSLEPCFESYISFLCKQLDSLLGERGNLEGELKSM 262  human
P35908  178 EREQIKTLNNKFASFIDKVRFLEQQNQVLQTKWELLQQMNvGTRPINLEPIFQGYIDSLKRYLDGLTAERTSQNSELNNM 257  human
P14136   69 ERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAK----EPTKLADVYQAELRELRLRLDQLTANSARLEVERDNL 144  human
P02542  100 EKVELQELNDRFANYIEKVRFLEQQNALMVAEVNRLRGK----EPTRVAEMYEEELRELRRQVDALTGQRARVEVERDNL 175  chicken
P21807   94 EKQELQELNDRFANFIEKVRFLEQQNAALRGELSQARGQ----EPARADQLCQQELRELRRELELLGRERDRVQVERDGL 169  Norway rat
P12036   97 EKEQLQALNDRFAGYIDKVRQLEAHNRSLEGEAAALRQQ--QAGRSAMGELYEREVREMRGAVLRLGAARGQLRLEQEHL 174  human
P16053   96 EKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAELAALRQK--HAGRAQLGDAYEQELRELRGALEQVSHEKAQIQLDSEHI 173  chicken
P23565   94 EKEQLQGLNDRFAVFIEKVHQLETQNRALEAELAALRQR--HAEPSRVGELFQRELRELRAQLEEASSARAQALLERDGL 171  Norway rat
P13648  109 REEHKELKARNAKKeadllaaqarlkdleallnskeaalstaLGEKRNLENEVRDLRaqvaklegalseakKQLQDEMLR 188  chicken
P19013  217 QDSVEDFKTKYEEE----------------------------INKRTAAENDFVVLK--------------KDVDAAYLN 254  human
Q01546  263 QDLVEDFKKKYEDE----------------------------INKRTAAENEFVGLK--------------KDVDAAFMN 300  human
P35908  258 QDLVEDYKKKYEDE----------------------------INKRTAAENDFVTLK--------------KDVDNAYMI 295  human
P14136  145 AQDLATVRQKLQDE----------------------------TNLRLEAENNLAAYR--------------QEADEATLA 182  human
P02542  176 LDDLQKLKQRLQEE----------------------------IQLKEEAENNLAAFR--------------ADVDAATLA 213  chicken
P21807  170 AEDLGALKQRLEEE----------------------------TRKREDAEHNLVLFR--------------KDVDDATLS 207  Norway rat
P12036  175 LEDIAHVRQRLDDE----------------------------ARQREEAEAAARALA--------------RFAQEAEAA 212  human
P16053  174 EEDIQRLRERFEDE----------------------------ARLRDETEATIAALR--------------KEMEEASLM 211  chicken
P23565  172 AEEVQRLRARCEEE----------------------------SRGREGAERALKAQQ--------------RDVDGATLA 209  Norway rat
P13648  189 RVDAENRLQTLKEELEFQKNIYSEELRETKRRH-------ETRLVEIDN-GRQQEfeskLAEALQDLRRQHEDQIRHYRD 260  chicken
P19013  255 KVELEAKVDSLNDEINFLKVLYDAELSQMQTHVs-----dTSVVLSMDN-NRNLD----LDSIIAEVRAQYEEIAQRSKA 324  human
Q01546  301 KVELQAKVDSLTDEVSFLRTLYEMELSQMQSHAs-----dTSVVLSMDN-NRCLD----LGSIIAEVRAQYEEIAQRSKS 370  human
P35908  296 KVELQSKVDLLNQEIEFLKVLYDAEISQIHQSVt-----dTNVILSMDN-SRNLD----LDSIIAEVKAQYEEIAQRSKE 365  human
P14136  183 RLDLERKIESLEEEIRFLRKIHEEEVRELQEQLa-----rQQVHVELD--VAKPD----LTAALKEIRTQYEAMASSNMH 251  human
P02542  214 RIDLERRIESLQEEIAFLKKVHEEEIRELQAQLq-----eQHIQVEMD--ISKPD----LTAALRDIRAQYESIAAKNIA 282  chicken
P21807  208 RLELERKIESLMDEIEFLKKLHEEELRDLQVSVes----qQVQQVEVEA-TVKPE----LTAALRDIRAQYENIAAKNLQ 278  Norway rat
P12036  213 RVDLQKKAQALQEECGYLRRHHQEEVGELLGQIqgsgaaqAQMQAETRD-ALKCD----VTSALREIRAQLEGHAVQSTL 287  human
P16053  212 RAELDKKVQSLQDEVAFLRGNHEEEVAELLAQLq-----aSHATVERKD-YLKTD----LTTALKEIRAQLECQSDHNMH 281  chicken
P23565  210 RLDLEKKVESLLDELAFVRQVHDEEVAELLATLqa----sSQAAAEVDVaVAKPD----LTSALREIRAQYESLAAKNLQ 281  Norway rat
P13648  261 ELEKTYGAKLENAKQSAERNSSMAGAAHEELQQTHIRIDSLSAELSQLQKQLAAKEAKLREVEEALSREREGGRRLLAEK 340  chicken
P19013  325 EAEALYQTKVQQLQISVDQHGDNLKNTKSEIAELNRMIQRLRAEIENIKKQCQTLQVSVADAEQRGENALKDAHSKRVEL 404  human
Q01546  371 EAEALYQTKLGELQTTAGRHGDDLRNTKSEIMELNRMIQRLRAEIENVKKQNANLQTAIAEAEQRGEMALKDANAKLQDL 450  human
P35908  366 EAEALYHSKYEELQVTVGRHGDSLKEIKIEISELNRVIQRLQGEIAHVKKQCKNVQDAIADAEQRGEHALKDARNKLNDL 445  human
P14136  252 EAEEWYRSKFADLTDAAARNAELLRQAKHEANDYRRQLQSLTCDLESLRGTNESLERQMREQEERHVREAASYQEALARL 331  human
P02542  283 EAEEWYKSKVSDLTQAANKNNDALRQAKQEMLEYRHQIQSYTCEIDALKGTNDSLMRQMREMEERFAGEAGGYQDTIARL 362  chicken
P21807  279 EAEEWYKSKYADLSDAANRNHEALRQAKQEMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARL 358  Norway rat
P12036  288 QSEEWFRVRLDRLSEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELEDRHQADIASYQEAIQQL 367  human
P16053  282 QAEEWFKCRYAKLTEAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNNDLTTYQDTIHQL 361  chicken
P23565  282 SAEEWYKSKFANLNEQAARSTEAIRASREEIHEYRRQLQARTIEIEGLRGANESLERQILELEERHSAEVAGYQDSIGQL 361  Norway rat
P13648  341 EREMAEMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGE 382  chicken
P19013  405 EAALQQAKEELARMLREYQELMSVKLALDIEIATYRKLLEGE 446  human
Q01546  451 QTALQKAKDDLARLLRDYQELMNVKLALDVEIATYRKLLEGE 492  human
P35908  446 EEALQQAKEDLARLLRDYQELMNVKLALDVEIATYRKLLEGE 487  human
P14136  332 EEEGQSLKDEMARHLQEYQDLLNVKLALDIEIATYRKLLEGE 373  human
P02542  363 EEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGE 404  chicken
P21807  359 EEELRQLKEEMARHLREYQELLNVKMALDIEIATYRKLLEGE 400  Norway rat
P12036  368 DAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGE 409  human
P16053  362 ENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGE 403  chicken
P23565  362 ESDLRNTKSEMARHLREYQDLLNVKMALDIEIAAYRKLLEGE 403  Norway rat
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