Conserved Protein Domain Family
CH_VAV2

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cd21263: CH_VAV2 
calponin homology (CH) domain found in VAV2 protein and similar proteins
VAV2 is widely expressed and functions as a guanine nucleotide exchange factor (GEF) for RhoA, RhoB and RhoG and also activates Rac1 and Cdc42. It is implicated in many cellular and physiological functions including blood pressure control, eye development, neurite outgrowth and branching, EGFR endocytosis and degradation, and cell cluster morphology, among others. It has been reported to associate with Nek3. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The model corresponds to CH domain, an actin-binding domain which is present as a single copy in VAV2 protein.
Statistics
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PSSM-Id: 409112
Aligned: 5 rows
Threshold Bit Score: 237.933
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative actin
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #   #                                                              # ##  ## #  
P52735         2 EQWRQCGRWLIDCKVLPPNHRVVWPsAVVFDLAQALRDGVLLCQLLHNLSPGSIDlKDINFRPQMSQFLCLKNIRTFLKV 81  human
NP_001079955   3 EGWRQCGRWLIDCKVLPVDHRVVWPsAVVFDLAQALRDGVLLCQLLHNLSPGSIDlKDINFRPQMSQFLCLKNIRTFLKV 82  African clawed ...
NP_989473      2 EEWRQCGRWLIDCKVLPPNHRVVWPsAVVFDLAQALRDGVLLCQLLHNLSPGSIDlKDINFRPQMSQFLCLKNIRTFLKV 81  chicken
KAA0719953     2 EEWRQCGRWLIDCKVLPPNHRVVWPsAVVFDLAQALRDGVLLCQMLHNLSPGSVDlKQINFRPQMSQFLCLKNIRTFLKV 81  Triplophysa tib...
XP_014346218   2 EEWRQCGRWLIDCKVLPPNHRVVWPsAVVFDLAQALRDGVLLCQLLHNLSPGSVDhKDINFRPQMSQFLCLKNIRTFLKI 81  coelacanth
Feature 1                #########     # ## ##  ##  #   
P52735        82 CHDKFGLRNSELFDPFDLFDVRDFGKVISAVSRLSLHSI 120 human
NP_001079955  83 CHDKFGLRNCDLFDPFDLFDVRDFGKVIAALSKISYHNI 121 African clawed frog
NP_989473     82 CHDKFGLRNSDLFDPFDLFDVRDFGKVISAVSRLSFHSI 120 chicken
KAA0719953    82 CHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI 120 Triplophysa tibetana
XP_014346218  82 CHDKFGLKNSELFDPFDLFDVRDFGKVISALSRLSHHSI 120 coelacanth

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