Conserved Protein Domain Family
FERM_F0_SHANK2

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cd17176: FERM_F0_SHANK2 
FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F0 sub-domain, found in SH3 and multiple ankyrin repeat domains protein 2 (SHANK2)
SHANK2, also termed cortactin-binding protein 1 (CortBP1), or proline-rich synapse-associated protein 1, is a postsynaptic density (PSD)-associated scaffolding proteins at the excitatory synapse that interconnects neurotransmitter receptors and cell adhesion molecules by direct and indirect interactions with numerous other PSD-associated proteins. It is strongly expressed in the cerebellum. Moreover, SHANK2 acts as a component of the albumin endocytic pathway in podocytes, and regulates renal albumin endocytosis. It also associates with and regulates Na+/H+ exchanger 3 (NHE3) and is involved in the fine regulation of transepithelial salt and water transport through affecting NHE3 expression and activity. Mutations in the SHANK2 synaptic scaffolding gene may lead to autism spectrum disorder and mental retardation. SHANK2 contains an N-terminal F0 domain of FERM (Band 4.1, ezrin, radixin, moesin), six ankyrin (ANK) repeats, one SH3 (Src homology 3) domain, one PDZ (PSD-95, Dlg, and ZO-1/2, also termed DHR or GLGF) domain, and a C-terminal SAM (sterile alpha motif) domain. This family corresponds to the F0 domain that adopts a ubiquitin-like fold.
Statistics
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PSSM-Id: 340696
Aligned: 5 rows
Threshold Bit Score: 190.577
Created: 5-Jan-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
key conserved
Feature 1: key conserved lysines, 2 residue positions
Conserved feature residue pattern:[KR] [KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:2 (K27/R, K48/R Ub numbering) of the 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering) are conserved in some members of this family; may have roles other than chain linkage

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                        #                           #                    
NP_036441      55 NTLVIRVVIHDLQQTKCIRFNPDATVWVAKQRILCTLTQSLKDVLNYGLFQPASNGRDGKFLDEERLLREYPQPVGeGVP 134  human
XP_014351375   54 NTLVIRIIIPDLQQTKCMRFDPDATVWVAKQRILCTLNQSLKDVLNYGLFQPASNGRDGKFLDEERLLKEYPQPINkGVP 133  coelacanth
KFP04342       54 NTLVIRIIIPDLQQTKCIRFNPEASVWVAKQRILCSLNQSLKDVLNYGLFQPASNGRDGKFLDEERLLREYPQPVNkGVP 133  Anna's hummin...
OCT83765       54 NTMVIRIVIPDLQQTKCIRFNPHATVWVAKQRILCTLNQSLKDVLNYGLYQPFSNGREGKFLDEERLLREYPQPMSrGVP 133  African clawe...
XP_007885943    7 NTLVIRIIIPDLQQTKCMRFNPDATVWVAKQRVLCTLNQSLKDVLNYGLFQPASNGRDGKFLDEERLLKEYPQPINkGVA 86   elephant shark
Feature 1                 
NP_036441     135 SLEFRYKK 142  human
XP_014351375  134 SLEFCYKK 141  coelacanth
KFP04342      134 SLEFRYKK 141  Anna's hummingbird
OCT83765      134 SLEFRYKK 141  African clawed frog
XP_007885943   87 SLEFSYKK 94   elephant shark

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