3HFD,2AYU


Conserved Protein Domain Family
NAP

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pfam00956: NAP (this model, PSSM-Id:334326 is obsolete and has been replaced by 460010)
Nucleosome assembly protein (NAP)
NAP proteins are involved in moving histones into the nucleus, nucleosome assembly and chromatin fluidity. They affect the transcription of many genes.
Statistics
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PSSM-Id: 334326
Aligned: 212 rows
Threshold Bit Score: 90.2755
Created: 17-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3HFD_A        21 LKKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGPIYDKrrealvgnge----------------------------aki 72  Plasmodium know...
Q4QDH7        55 AQVLSAYDKDLSAQQKAYKAKEMDILRRYDALFEPLLQRrkeivtgaavsdeevkkgmpeehvnvisvevdetdeaakaa 134 Leishmania major
Q4D5X8        45 AKVLLHYHEEYEKLRKNFEEKETALRRQYDELYAPLHDHrkeiitgsreptdeevakgfpse--hegqvdikvteaeadk 122 Trypanosoma cruzi
Q387Z3        54 AQVLLYYHEKCERIRKDFEEKETALRRKYDEIYAPLLDKrkeiitgahlptdeevrkglp------sehegkvsvttdad 127 Trypanosoma brucei
XP_003288454  22 VNALLKLQEAHEELSEQMEKEILEIEKKYLLKFQPLADKrgeiikgsvepteeekgak----------epitvdnltskp 91  Dictyostelium p...
XP_650261     28 ISMCQNIAKEYQKLKIASEKEKHESQIKLNESAKPYYERrkaiimgapltdeeiqgyq----------annecpanesse 97  Entamoeba histo...
XP_008859515  27 yhACTKKMKEIQKLRLVCERARYEAMSKFNEEASKIYGRmneiitgnaqptedelegyi---------ksdelvaqegsq 97  Entamoeba nutta...
CCC94514      51 VQVLLHYHEECEKIRKSFEEKETALRRKYDELYAPLLDKrmeiitgkhlptdeevmegmp------sdhqgvvditctdd 124 Trypanosoma con...
EFA81668     360 VNALLKLDDDHTEISKKLEQRIRLLELEFQPQFDAIYQKrtgivtgeveatetpke--------------pleiaglksg 425 Polysphondylium...
XP_004354514  21 VNALVKLQDQHDDLNLEMEKEIKAIEAKYRVLYTPLYEKrsqivsgavepsgdeiapk-----------epievpdlksg 89  Dictyostelium f...
3HFD_A        73 gtpnlpeFWLRALRNNNTVSHV-I-E-DHDEEILVYLNDIRCDy-----------IKknkEk----kEG-------FILS 127 Plasmodium know...
Q4QDH7       135 dafglegFWLRVLRHHAVIDST-I-E-PHDEDVLKHLVDIRSSv----------------------aEGey---gsFQVI 186 Leishmania major
Q4D5X8       123 svvgipgFWLRVLRGHVLSDSL-I-E-EHDEEVLNHLKDIRSGv----------------------lDGsy---gsFAVV 174 Trypanosoma cruzi
Q387Z3       128 vgkglpgFWLRVLKHHVLSASM-I-R-DHDEPVLMHLIDVRSGv----------------------vDGgy---gsIAVA 179 Trypanosoma brucei
XP_003288454  92 evkgipnFWTIVLKNTE-IGEI-I-E-TVDEEALSHLVDVKITq-----------VG---Dn----sD--------YSID 141 Dictyostelium p...
XP_650261     98 yqngvpcFWLHVLKNSGIFDGL-SgN-EEDSIILTYLQDINADy-----------FS---TedctlkDGtptllfkYNVN 161 Entamoeba histo...
XP_008859515  98 fnkgipvFWFQVLKNSMLFDSA-NgS-EADISVLIHLKNIRIEympledvknkdgED---Tl----kYH-------YKVH 161 Entamoeba nutta...
CCC94514     125 tekglpgFWLRVLKHHVLPKFV-I-K-EHDEPVLMHLMDVRSGv----------------------vDGgy---gsFAVA 176 Trypanosoma con...
EFA81668     426 eekgipnFWYKALMNHPAFADV-M-G-EEDDEALQYLTNISIGe----------dAT---T------DNen---qvLTAT 480 Polysphondylium...
XP_004354514  90 aekgipqFWWTAMKNHQLIGEAsA-DsEHDDDIFAFVSNVSTQe-----------------------PEgg---deFSVT 142 Dictyostelium f...
3HFD_A       128 FHFAPNPFFSNSVLTKTYHMKC-VDCDN-----EPVLLHTEATVIDWYDNKNILKKNVVKKQHNK-NSR---E--VKTVQ 195 Plasmodium know...
Q4QDH7       187 FTFSPNDFFEEETITATVSIK-------------DDKSELTVSPITWKPGKNVMIHTVTKKQRAKrt----gQ--VRTTT 247 Leishmania major
Q4D5X8       175 FVFGSNDFFQEESLVLSVKHN-------------DDGVKIIRTPPTWKPGKDVTVETVTKKLGGK--RGkgaK--TKTFT 237 Trypanosoma cruzi
Q387Z3       180 FVFEPNPFFQEETLILKLVQG-------------DDGATVTRTPITWKPGKDVTVRTEKVKKSGK--RGqggK--VKTIT 242 Trypanosoma brucei
XP_003288454 142 FHFSENPFFTNTVISKTVHIQ------------EDELQSIDSTPIEWKEGKNFTSKVVKKQVKGR-GKG---K--ASTAT 203 Dictyostelium p...
XP_650261    162 FLFGNNPYLRNNQITIQITYK---LGDIegefeEPKINTI--TPLDWVKGKDPRFKITRKKTNKK-GRN---Q------- 225 Entamoeba histo...
XP_008859515 162 FDFEPNEYFTNETITVSVQCKLcEAEGEf---dEPAVI--TETPIEWHKDKDVRYKLVKRRGGKR-GGR---GrpAAAVR 232 Entamoeba nutta...
CCC94514     177 FIFEPNEFFEETTLILKLIQG-------------EDGVNIDRTPITWKPGKDVTVK-KKRKKTGK--RGqagK--SAMVT 238 Trypanosoma con...
EFA81668     481 FHFAPNAFFTNSTIVMTLTVK------------DGDLDSIKVTPVQWNEGKKFFVRTVEKKIKKKgPKG---K--KPTVT 543 Polysphondylium...
XP_004354514 143 FTFADNQFFSNKDLTITVNINq----------eEMDLDSIDVTPIQWKDGKNFTVKKVEKTVKKKgPKG---K--AASVS 207 Dictyostelium f...
3HFD_A       196 QTVNRD---S---FF-HFFTSHKVPNSnvikqlskhevaqlemiieGDYEVALTIKERIIPYAVDYFLG 257 Plasmodium knowlesi strain H
Q4QDH7       248 RDVPQL---S---FF-WLFKkkteavgdddaekd-----geeddeeqrismleVLHTCIVPNAVRYYTG 304 Leishmania major
Q4D5X8       238 --VPRN---S---FF-NVFKemskekaeaggdddeedddddedeeeqieqllnVLHTSIIPCAVNFYTG 297 Trypanosoma cruzi
Q387Z3       243 --VPQP---S---FF-NTFKenggsgaatahdddd---eddededewteqllqVLHTSIIPSAVHHYTG 299 Trypanosoma brucei
XP_003288454 204 TKMVSE---SvpcFFgSFLGAVAEDDEaiedeee------ddprmyMQFQIIAKLKDIIIPNAVEFFLG 263 Dictyostelium purpureum
XP_650261    226 QETKVE---S---FF-DLFYPQELALNndinddgli--deealpihDMFQALLTLINEVIPAAVNYFde 285 Entamoeba histolytica HM-1...
XP_008859515 233 QKV--E---S---FF-DLFYTPALPENlnleemeev--dedviichTNFKIFMELINEVYPMALSFFde 290 Entamoeba nuttalli P19
CCC94514     239 --VPRA---S---FF-NAFKesgweidadddddddd--eldggddewieqflqVLHTSIIPSAVHHYTG 296 Trypanosoma congolense IL3000
EFA81668     544 TKMVTEtipS---IF-GRFLvefdknqieeepe-needipaaqliyIQYQALISLKDEIVPDAVNYFLG 607 Polysphondylium pallidum P...
XP_004354514 208 TKTIEEkvpS---LFaSLFLkhelpsaetme----veddqdaseiqTQYQCAVILKETIIPNAVEWFLG 269 Dictyostelium fasciculatum
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