Conserved Protein Domain Family
RING-HC_malin

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cd16516: RING-HC_malin (this model, PSSM-Id:319430 is obsolete and has been replaced by 438179)
RING finger, HC subclass, found in malin and similar proteins
Malin ("mal" for seizure in French), also known as NHL repeat-containing protein 1 (NHLRC1), or EPM2B, is a nuclear E3 ubiquitin-protein ligase that ubiquitinates and promotes the degradation of laforin (EPM2A encoding protein phosphatase). Malin and laforin operate as a functional complex that play key roles in regulating cellular functions such as glycogen metabolism, unfolded cellular stress response, and proteolytic processes. They act as pro-survival factors that negatively regulate the Hipk2-p53 cell death pathway. They also negatively regulate cellular glucose uptake by preventing plasma membrane targeting of glucose transporters. Moreover, they degrade polyglucosan bodies in concert with glycogen debranching enzyme and brain isoform glycogen phosphorylase. Furthermore, they, together with Hsp70, form a new functional complex that suppress the cellular toxicity of misfolded proteins by promoting their degradation through the ubiquitin-proteasome system. Defects in either malin or laforin may cause Lafora disease (LD), a fatal form of teenage-onset autosomal recessive progressive myoclonus epilepsy. In addition, malin may have function independent of laforin in lysosomal biogenesis and/or lysosomal glycogen disposal. Malin contains six NHL-repeat protein-protein interaction domains and a C3HC4-type RING-HC finger.
Statistics
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PSSM-Id: 319430
Aligned: 7 rows
Threshold Bit Score: 71.788
Created: 7-May-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteRING-HC finger
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Based on the structural evidence that Homo sapiens Cbl (1FBV) binds two Zn2+ ions through its RING-HC finger.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #                 # #  #  #                     #  # 
Q6VVB1        25 ECKVCFEKFghrq-qrrpRNLSCGHVVCLACVAALahpr--------tlalECPFCR 72  human
XP_426034     48 ECRVCFERYgpgg-qrrpRNLPCGHVLCRGCVEALggpe--------rrrlECPFCR 95  chicken
XP_002932735  25 ECKVCFEKYsqqq-khrpKNLPCGHVICQECVLALcpqg--------ssrlECPFCR 72  western clawed frog
NP_001123114   5 KCKICFDRFsdtdsehipRNLTCGHALCHKCITAMvnn----------stvECPFCR 51  nematode
XP_006011441  24 ECKVCFEKYshqq-qhrpKNLLCGHVMCQDCVSSLarpq--------hfklECPFCR 71  coelacanth
KKF32558      28 ECKVCFEKFstqqrehrpQTLSCGHVLCRECITALshpl--------lrklECPFCR 76  large yellow croaker
Q94B55       318 LCCICFEQVct------iEVKDCGHQMCAQCTLALcchnkpnpttstvtppVCPFCR 368 thale cress

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