3G5B


Conserved Protein Domain Family
UPA

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pfam17217: UPA (this model, PSSM-Id:319235 is obsolete and has been replaced by 465384)
UPA domain
The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich structure.
Statistics
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PSSM-Id: 319235
Aligned: 15 rows
Threshold Bit Score: 217.61
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3G5B_A        151 AVKRLQLAIF-APALCTSLEYSLRVYCLEDTPAALKEVLELERTLGGYLVEEPKPLLFKDSYHNLRLSLHDIPHAHWRSK 229  Norway rat
XP_008287714  271 AAKRLKLAVF-GPVSCTTLDYHIRVYCLDDTQDALKEVLQMETQMGGKLLDEPKTLNFKDSTHNLRLSIHDVPHTHWKSK 349  bicolor damse...
XP_014872449  310 AVKRLKLAVF-GSVEAGALNYSLRVYCVDDTPHAFQGVVAAETSRGGQLLEEPKTLPFRANTFSLQVSIQDVPQFLWSIK 388  sailfin molly
ABB59712      635 AIKRLRIAVF-GSMEASSLDYSLRVHCVDDTPHAFQGVVTAETCRGGQLLEEPKTLFFKGNCLSLQVSIQDIPQFLWSIK 713  zebrafish
XP_014914699  245 AAKRLRLAVFgSPDLSNSLGFTLRVYCVDDTPYAFQEVVVGERSRGGRLLEEPKILLFKGNTFSLQVSIQDVPRLLWSIK 324  sailfin molly
XP_015457919  612 AGKRLRLAVF-GNLEADALTYSLRVYCVDDTPYAFQEVVWLERGQGGRLLEEPKTLLFKANCFSLQISIQDVPQFLWSIK 690  Mexican tetra
BAG53621      263 AVKQLKVAVF-GCMSCNSLDYNLRVYCVDNTPCAFQEVVSDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIK 341  human
XP_009065885  619 AIKILRLAAF-APAAPPAMDYSIRVYVVEDTHDGLEGVIQMEKKLGGRLLDKPKQIPFQDCGNNLCLSIEELSP-GWRSK 696  owl limpet
XP_009078496  246 ASKRLKLVLF-APAACPSLEYNIRVYCLSDTQDVLKEVIQLEKQLGGQLIGAPRVLHFKDSYHNLRLSIHDMPSSLWKSK 324  rifleman
XP_007427408  599 ASKRLKLVLF-APTTCTGLEYDVRVYCLSDTRDALKEVVQIEKQMGGQLIGAPRILHFKDSYHNLRLSIHDVPSSLWKSK 677  Burmese python
3G5B_A        230 LLAKYQEIPFYHVWNGSQKALHCTFTLERHSLASTEFTCKVCVRQ--VEGEGQIFQLHTTLAE 290  Norway rat
XP_008287714  350 LIAKYQEIPFYQVWSGSQRSLHCTFTLERLSAATTEISCKLCVRQ--VEGEGQIFQLSNTLEE 410  bicolor damselfish
XP_014872449  389 PFTTCQEFSFPQVWCSNQQPLHCAFQLERYSPAATQLSCKISVRQ--VKGHEQILQVYTAVAE 449  sailfin molly
ABB59712      714 PFTTCQEFSFTQVWYSNQQPVHCAFSLQRHSAATNQLSCKISVRQ--VKGHEQILQVYTSVGE 774  zebrafish
XP_014914699  325 PFTTCQEFSFSQVWASNRCPLQCAFSLERYSLSSSQLSCKISVRQ--VTGEEQILQIYTSVVE 385  sailfin molly
XP_015457919  691 PFTTCQEFGFSQVWGSNQSPLQCAFTLERFSQATNQLSCKISIRQ--VKGQEQILQVYTTVGE 751  Mexican tetra
BAG53621      342 PFTACQEVPFSRVWCSNRQPLHCAFSLERYTPTTTQLSCKICIRQ--LKGHEQILQVQTSILE 402  human
XP_009065885  697 LAANYQEIPFRHIWSGNQNNLHCSFSVESIDRIQSNVSCKIQVYQkaVPNNRQVIRISSNIKE 759  owl limpet
XP_009078496  325 LLASYQEIPFYHIWSGLQPFLHCTFTLERLSTSTCELACKIWVWQ--VEGDGQSFTVNFNIAK 385  rifleman
XP_007427408  678 LLVSYQEIPFYHLWSGLQPYLHCTFTLERLSTNTCQLACKIWIWQ--VEGDGQSFNIDFNIAK 738  Burmese python
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