Conserved Protein Domain Family
CCDC142

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pfam14923: CCDC142 (this model, PSSM-Id:317348 is obsolete and has been replaced by 464379)
Coiled-coil protein 142
The function of this coiled-coil domain-containing family is not known. It is found in eukaryotes.
Statistics
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PSSM-Id: 317348
Aligned: 9 rows
Threshold Bit Score: 468.517
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8CAI1        287 LWAACAKCL------------------DLRVGPWEDPRAMAQELSQALCQAPlPQECEKELLSLCHSLFHQSVICSWDQG 348  house mouse
7_pfamImport    1 LWTQVGGTLehvvl--------wwsasPLACRPPACAKYLRDWLSLLQVDEA-PEPILSTLKGLGETLTVHVTSTIWDKQ 71  
4_pfamImport    2 LWAACAQSL------------------DLSLGPWRDSRAAAQQLSQALGQASlPQECEKELASLCRNLTHQSLIWSWDQG 63  
5_pfamImport    2 LWAACAQSL------------------DLNLGPWREHRAVAQQLSEALVQASlPQECVKELASLCHNLLHQSHIWSWDQG 63  
6_pfamImport    2 MWKAFGTYFsdlfhfqpw-lltcsnikVIMLWIPVILLILITFLMFSSFQALtPSECEMVAKELHQHVLSQAAFIRWDQV 80  
3_pfamImport    2 LWKQFGKAVirhfyyq----pynstlgSINQWNDEMLLLLVSWLKHSYFEDLiPEECKESLSDFCFYLLSTAAFTQWDEM 77  
XP_015200480  600 LWEEFGSALfnilyhp----scngifgSLNQCKEQMVFLAVKELHGGCRKALiPGECEGVINDLCMQVISKAAFVHWDQV 675  spotted gar
XP_002608310  548 VWQSFGANLaemvsepvw-rgnpagmgPIVLYNPTVAMLLLHVVTQVSSKDMlPTAAVAALQPVLHSLHHTAAIQDWDTA 626  Florida lancelet
XP_001639757  500 LWDHLGPALcnllhglrrrrntynplgSVILWPNSLVLVALSLLESLHKSGSlPQSGTVALQLVSRDLHSHLSRLTWDLG 579  starlet sea a...
Q8CAI1        349 FCQALGSA-------------------------------LGGQsspaslspTseLLQRLFPPLLDSLRQPRPELRLCPPa 397  house mouse
7_pfamImport   72 FRLAVVSSslpvdypfennefcgknvkvskgscwriigdLTYQclslkvegT--VCGKVWSELLYQLVQLSNTCDIGTI- 148 
4_pfamImport   64 FCQVLGSA-------------------------------SGNQsslpssscTtkLLQQLFPPLLDALREPRSGLLLCGPp 112 
5_pfamImport   64 FCQALASAa------------------------------LGDQsspastshTaeLLRQLFPPLLDTIQECRSGLILCQPp 113 
6_pfamImport   81 FCCALGSSvkdk-----------------------cgldPEKKdatv-rtrTgrLLQELFPPLCFLLKCLGSELCQNEDl 136 
3_pfamImport   78 KCLSLGSGlkek-----------------------cvpgAKLEgcai-rtaTmdLILQLFLPLHTVLQLLQHPDIESGDi 133 
XP_015200480  676 MCKALGSGqkdk-----------------------clpdPNNEgsivrtttTtwLLQQLFHPLHTVLGSLKD----GGNw 728  spotted gar
XP_002608310  627 FCAALSTSakdkcvp-----------------vaigsgdLGTQ--------TvqLCREVCYPLLSVLQSVENSLQKGYPs 681  Florida lancelet
XP_001639757  580 FCDLLGTSlkdk-----------------------cipdENTK--------PgyLSSKTLSKLAALLQPLKSMFDCSYYw 628  starlet sea a...
Q8CAI1        398 g-----------ptPVA---------LGL-----------CTLQTTLLWFVGRAQQHLAAWDPGSFLLLLQKDLPPLLSA 446  house mouse
7_pfamImport  149 --------------ANE---------LPLveqipvlhrldHSIHSMRIWAANKARSLCTDWNMMMFFKVVHNDIGLCLEQ 205 
4_pfamImport  113 g-----------paPLA---------LGL-----------CTLQTTLLWFWSRTQQHLAAWAPGSFLLLIQKDLPPLLQE 161 
5_pfamImport  114 g-----------paPIA---------LGL-----------CTLQITLLWFLGRTQQHLAAWAPDSFLLLIQNHLPPLLHE 162 
6_pfamImport  137 gsk--------svdETL---------LILlnr------wvATAQLSSYWVMTKAHQYLSSWSLSQFLLVTQSDLKKMKDA 193 
3_pfamImport  134 esk--------slkRNH---------LALlcr------svATVHSSTIWVMSKAFQFLASWSITKFLLVTQGDLKDLKDS 190 
XP_015200480  729 qkg--------atsKTEhlsaqellqLTLlsc------tvATVHSSSYWAMTKAYQFLSSWSLNQFLLVTQGDLKVLKAE 794  spotted gar
XP_002608310  682 gqngvipplanyqtQLL---------LSIpptl---arlvATLQSASHWLSTRTNLYLSSWTLDKFLLLSQRDLKVLTDT 749  Florida lancelet
XP_001639757  629 kdrls---nhdtfrSHS---------LALiplv---trlqSVLSFSTNWIDSKLYHLLSSWSLTSYFTVLHWDLPLFLDM 693  starlet sea a...
Q8CAI1        447 VEALssLASEAal----------tLEVEQ--Q-------------LGLEIHNLTEKMQLLPKESLGLFVQECHKQATQGF 501  house mouse
7_pfamImport  206 LQYI--RVPELsandplevqvqvcVALRA--K-------------LVSEIKENIIKLKATCTECIDVLAAVCRTTSLASL 268 
4_pfamImport  162 AEALshLASEEsl----------aLDVEQ--Q-------------LGLEIRKLTVQIQLLPEESLSLFFQECHKQATQDF 216 
5_pfamImport  163 AEALsrLTSEEsl----------tLAVEQ--Q-------------LGLEIQKLTAQMQLLPEESLSLFFQECHKQATQGF 217 
6_pfamImport  194 GSHLvhPFKIVlqtc-----cthtLIVAQ--T---------------TCKLKCILYIQVFSEKVLQLFTADCRKMATEIF 251 
3_pfamImport  191 VESLvhLTRAVirds-----avhpLIVQQ--T---------------DSLSKALTELQAFSDLVLRTFTMDCKKMSTEIF 248 
XP_015200480  795 IEKIvpLVEALnldnkctpgltgkLLLQQekT-------------LLAQLTEGAANIQAFSENVLKIFSTDCKKMAVEIF 861  spotted gar
XP_002608310  750 AVMSlkQSRQL-------------YILAE--SgganyqlklrlnhMVQQLNHISAGLHCLSSAASQAFSQDCTKMTTNFW 814  Florida lancelet
XP_001639757  694 ASKTvsAVKP--------------LCLGQ--Ggnlsw---gslpiLLEELQGSLLRLESISKKYESLFSGDLAKMSKEFF 754  starlet sea a...
Q8CAI1        502 KLHMPRGRYWRLRLcpePPSDPSEYARIVVYSVLEPVLQGLQglppeaQAPALGQALTATLGAWLDHILTHGIRFSLQGA 581  house mouse
7_pfamImport  269 TLCFPYFKHWQTEV---LQERANEYVAYFFNQIYLPVIQATK------DIEILKLTLKIICEAWLDHIYMKKTKFSSSGA 339 
4_pfamImport  217 ELHMPRGRYWRHRLcseLPSIPSEYAGLVVRRVLEPVLQGLHglppqaQAPALSQALTAILGAWLDHILSHGIRFSLQGA 296 
5_pfamImport  218 KLYMPQGRYWRLHLcpgLPRVPSEYAGLVVRTVLEPVLKGVQglppqaQALGLSQALTAILGAWLDHILTHGIRFSLQGA 297 
6_pfamImport  252 QQIMPVGKQWRVGFkpeLPTGPSDYAATAAQTVIGQVLDGIHshsedaQIFPLTEAMTAFMEAWMEHILKQKIKFSLQGA 331 
3_pfamImport  249 EQTMPSARHWRINHkteLPSSPSDYAACAVQSVIGQVLEGVQplpdnaRVPALTEAMTAFMEAWMEHILKQKIKFSIQGA 328 
XP_015200480  862 KQTMPGGKHWRVNCraeLPGSPSEYAASAAHSVLGQVLEGVQplpdeaRALALTEATTAFMEAWMEHILKQKIKFSVQGA 941  spotted gar
XP_002608310  815 QECMPTGKVWRKKSsldLPEEPNTYAEQAVETVLFPVTEGVSklkttaQISAVSVAVSAMLESWLSHILKERIKFSYHGA 894  Florida lancelet
XP_001639757  755 QEAMPIGRSWKKSRhsgVPCQPNSYVEHAVMQILEPVFRSSAhlreesKMSLMIQATVTMMDTWSRHILNSEIVFSYFGA 834  starlet sea a...
Q8CAI1        582 LQLKQDFGVVREVLEQeQWGLSQELRQTLLSLSIFQQLDGALLCLLQQPlpknpvhrr---pprcclcyeVQTT-E-LPT 656  house mouse
7_pfamImport  340 LNLLKDFDGVAEWINA-CTALDERIRDTLSHHEVLRMCEGVGKLLLRKP---------------------EETI-SiLPS 396 
4_pfamImport  297 LQLRQDFGVVRDLLEEeQWGLSPELRQTLFMLSIFQRLDGALLCLLQQPlpktqvhrr---lprccacneVQTM-E-LPS 371 
5_pfamImport  298 LQLRQDFGVVRELLEEeQWDLSPELRHTLLMLSIFQQLDGALLCLLQQPlpktrvhrr---spcccvcneVQTT-G-LAS 372 
6_pfamImport  332 LQLKQDFDMIRDLIQSqEYSLSAEIRQALLSLRVFHQVDNAIICLLQQPinktyvpartwepfrncccsrNRTG-T-FNS 409 
3_pfamImport  329 LQLKQDFDLIRDMIRSeEYSLSEELHQKLLSLRVFHQVDNAIVCLLQQPmakpylpsrgwepfrhccpnsAQVM-DqAAA 407 
XP_015200480  942 LQLKQDFDTIRELLKSeEYSLSEEIRQRLLSLGVFHQVDNAIICLLQQPaskayvpsrtwepfrrccsnpSRTR-D-FNT 1019 spotted gar
XP_002608310  895 HQLQLDFGCVRNFVSSeFSSLSADAQQSILSLDAFKHVEGVVTLLKKQPfgr---------------kgkSETGsD-GGL 958  Florida lancelet
XP_001639757  835 QQLQLDFSYVKYWISSdASGLEEDAKSELLSLDSFRHLDAAIQLLMLQPkk----------------------------- 885  starlet sea a...
Q8CAI1        657 SSLNSLENLAPPLRLGVSPAQNTHLLSTLGgggr-gggGGGGPGPSPEa-YLVGNQQAWL 714  house mouse
7_pfamImport  397 PSKAGKKTDGTKLSQAFKTVFNVLTFVSET--------ADEKAPLPPE--MFVPNQKRWL 446 
4_pfamImport  372 SSLNSLESLEPPLRPGVFPTQTAQLLSTLWg-----------gGPSPDa-YLVGNQQAWL 419 
5_pfamImport  373 SSLNSLENLEPPLLPGVPPSQTMPLQSTPGs-----------gRPSLEa-YLVENQQAWL 420 
6_pfamImport  410 GSLNSLDSL------DLETARNRAILQAETsats-dilSNIRANGNPEs-YLAANQQEWL 461 
3_pfamImport  408 GSLNNLESM------DIQAACQQALTQAESsltp-ellS----STPQEs-YLAAAQQEWL 455 
XP_015200480 1020 GSLNSLESM------DVQVARNNAIVQAESslap-ellGKIKSNAIQEs-YLAGKQQDWL 1071 spotted gar
XP_002608310  959 KLSHTLESNMSEYSHSTGPGSNRGSFSSDSpian-gsdSDVAMGGSEEdlYRLPNRQAWL 1017 Florida lancelet
XP_001639757  886 --kkQSDELDVELESNISAVSTSSVLSSLSgvdadtfmTDVLMD------KTIPNKQKWL 937  starlet sea anemone
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