2LD7


Conserved Protein Domain Family
SAP30_Sin3_bdg

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pfam13867: SAP30_Sin3_bdg (this model, PSSM-Id:316390 is obsolete and has been replaced by 464006)
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Sin3 binding region of histone deacetylase complex subunit SAP30
This C-terminal domain of the SAP30 proteins appears to be the binding region for Sin3.
Statistics
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PSSM-Id: 316390
Aligned: 59 rows
Threshold Bit Score: 78.7402
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2LD7_A         27 LQVNTLRRYKRHFKLp--TRPGLNKAQLVEIVGCHFKSI-P-VNEKDTLTCFIYSVR 79  house mouse
37_pfamImport   1 -RPNALRKYMAFHGIp-eV-PGGSREQLAVTVARHFSQEcKkADESSSITNFVT--- 51 
42_pfamImport   1 -RANALRRYMAHHRIq-eI-PGSSQAQLAVIVARHFNEEcQrADEEESISSFVSY-- 52 
41_pfamImport   1 LGMEALKRYAQFYNLt--VRDEHEKDDIAAMVARHFDCS-LeVEEDDSIVSFIQRIR 54 
XP_004991936  107 LPLPTLKKYKTRFg----VRDNGTKDGLVKAVEDHFSAQ-H-VSELDVILAFARTVR 157 Salpingoeca rosetta
XP_003056757  159 LGLDTLKKIEEGHYKq-aVSPDEQKRKLVASVAEHFMKE-Q-VDEAEVLMNFMAAFs 212 Micromonas pusilla CCMP1545
XP_004359804  372 LENKSLKKYNALHKLk--LSNSPSRRELVNAVSQHFDAQ-K-IDEDSIISQFLKRIK 424 Dictyostelium fasciculatum
CBJ26523       33 LPTSTLLTYTAHHDLh--VRPDSTHEELAIATARHFAAW-R-INEESIMRSFCQgla 85  Ectocarpus siliculosus
XP_001419519  184 LTLSTLQKYKKAYEMeanPETDGDKNALVHEVGKHFMQQ-K-LDEQKVLQAFMCAVa 238 Ostreococcus lucimarinus CCE9901
CBJ48948       33 LEYRTLQKYCKLHGIn--VRPDCSQAELAVAAARHFQEA-PsVDEEGVMVSFLQKVi 86  Ectocarpus siliculosus
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