Conserved Protein Domain Family
Dmrt1
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pfam12374: Dmrt1 (this model, PSSM-Id:315122 is obsolete and has been replaced by 463555)
Double-sex mab3 related transcription factor 1
This domain family is found in eukaryotes, and is typically between 61 and 73 amino acids in length. The family is found in association with pfam00751. This family is a transcription factor involved in sex determination. The proteins in this family contain a zinc finger-like DNA-binding motif, DM domain.
Links
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Statistics
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PSSM-Id: 315122
Aligned: 18 rows
Threshold Bit Score: 63.2042
Created: 27-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P85119        86 ELGISHPIPLPiAA-ELLIKREHGGSssCLMLE-SSS----TQTTstSTSGSTTSS----E------------GKMLIQE 143 tropical clawed...
XP_003216601  35 ELGISHPIPLP-NAtEMYVKKEGSANgsCLLLEsSSP----QQSTtaATTVSSAST----E------------GRMLIQD 93  green anole
CCP19129      75 ELGISHPIPLPsAA-ELLVKRESNGNgsCLLVEgGVGggggATPTasNSAGSASAT----E------------GRVLVQE 137 Menado coelacanth
XP_011614133  82 ELGICSPVPLS-GA-GMMVKNEAGAE--CFFSAeGRN----QAATstSSSSVVPAS----R--------------SVTSS 135 torafugu
NP_001273240  87 ELGISAPVNLS-GP-DVMVKNEAAAD--CLFSVeGRS----SPSTn-FSHSSLAVS----G------------SRSSASS 141 southern platyfish
XP_002194579  43 ELGISHPMPLPtVA-EMFV-KNSGGSs-CLSLGsSSP----VHSTgtAM----TAAstppE------------GGMLIQD 99  zebra finch
XP_005060932  41 ELGISHPVPLPsVP-ETFVKKNSGGSs-CLSLEgSSP----MHSTstAM----TAAstppE------------GRMLIQD 98  collared flycat...
ELW63100     201 ELGISHPIPLPcAA-ELLVKRENNVGnqCLMTEsSSS----VQPPppSIPTTAASG----KvcqyhaashsgsKRDVWSS 271 Chinese tree shrew
XP_014920007  30 ELGISHPIPLPsAA-ELLVKRESNGNnpCLMTEsSSP----SQPGp-aSTPTTAAS----E------------GRMVIQD 87  cheetah
XP_016279458 132 ELGISHPIPLPsAA-ELLVKRENNGSssCLMSEsSSP----TQAPs---tPTTSSE-----------------GRMVIQD 186 gray short-tail...

P85119       144 IPSITS-RGHLESTSD 158 tropical clawed frog
XP_003216601  94 IPSLAS-RGHLESTSD 108 green anole
CCP19129     138 IPSISS-RGHLESTSD 152 Menado coelacanth
XP_011614133 136 RPSAGA-RAANDGQSD 150 torafugu
NP_001273240 142 SPSSSSvRPHAEGTSD 157 southern platyfish
XP_002194579 100 ISSLPS-RGHVESTSE 114 zebra finch
XP_005060932  99 IPSIPS-RGHLESTSE 113 collared flycatcher
ELW63100     272 IPAVTS-RGHVENTpe 286 Chinese tree shrew
XP_014920007  88 IPAVTS-RGHMENTPD 102 cheetah
XP_016279458 187 IPSVTS-RGHLENTSD 201 gray short-tailed opossum
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