4MO3,2W94,2VME,2WUH,1SDD,2L9L,2PQS,3I97,4OZO,1EUT,3GGL,3HNM,4A45,2V72,2W1Q,1T2X


Conserved Protein Domain Family
F5_F8_type_C

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pfam00754: F5_F8_type_C (this model, PSSM-Id:307069 is obsolete and has been replaced by 459925)
Click on image for an interactive view with Cn3D
F5/8 type C domain
This domain is also known as the discoidin (DS) domain family.
Statistics
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PSSM-Id: 307069
Aligned: 184 rows
Threshold Bit Score: 39.3501
Created: 12-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4MO3_M   38 QITASSHls--niFATWs---PSQARLHl-qG----RTn---AWR---PRVSSAE-----EWLQVDL-QKTVKVTGITTQ 95   pig
Q833V2  989 QVKATSNlp---eQPGA----ELKKLTD---Kd--lST----GWHtnwSTGIANPsdgnfLSLKFDL-GAEYQMDKIEYL 1051 Enterococcus faecalis
Q8XKW1  300 NIKSIKN------NGRHyaaqNIEKAID---Nd--vNT----YWE---TGTLNSSsf--nNEVEVEF-NDLVTLDRIVYG 358  Clostridium perfrin...
Q8XKW1   75 NIKSITN------NGGKynssTIDKAID---Gn--lET----HWE---TGKPNDSnf--tNEVVVTF-NEITNIDRIVYS 133  Clostridium perfrin...
Q8A3D9  234 SGTASSF------QSGS----NIEKSFD---Gd--ySTlyhsSWS---NGASNYFp----ITLTYNF-ETVTDVDYLIYH 290  Bacteroides thetaio...
Q89ZX7  139 GGKASEHqegqdiENTY----DGKFSTD---G----AA----PFHt--PWGQSAKf---pVTLEYYF-KGDTEIDYLIYY 197  Bacteroides thetaio...
Q89ZU9  236 KVTGGYDtd---hQPGQ----DISKSYDgqfGgtcyHS----TWS---QSAKFP------VTLEYQFdQNQLTLDYILYH 295  Bacteroides thetaio...
Q8A5P4  178 EVSSEET------SGEGsdngHAIHAFD---Gl--kGT----FWHt--QWKGNEPqp--pHHIVVDM-GQEVKMLGFQYV 237  Bacteroides thetaio...
2V72_A   17 TASATSE------EGQD----PASSAID---Gn--iNT----MWHt--KWNGSDAl---pQSLSVNL-GKARKVSSIAIT 71   Clostridium perfrin...
Q8VPE8 1329 GTNSEEPtk--glPGEG----PVALAFD---Gd--pGT----HWHs--EWNGHAYpi--dAWWRTDA-APGQELCAVTYQ 1388 Trueperella pyogenes
4MO3_M   96 GVKSLLs-SMYVKEFLVSSS--QD-Gr-RW---TLFLQdghtkvfQGNQD--SSTPVVNALDp-PLFTrYLRIHPTS--- 161  pig
Q833V2 1052 PRDNAG--NGNILQLQYRTS--KD-Ga-NW---TEFSE-------PINWK---QDALTKTIEtkDQAYrFVEMKVLK--- 1109 Enterococcus faecalis
Q8XKW1  359 SRQSDL--KGFAEEVYIYASrtSK-Gd-TY---KLVAT-------GAHEA--TKGLVEAKFE--PTEFkRVKFKFKK--- 417  Clostridium perfrin...
Q8XKW1  134 ARRDSArgKGFAKEFEIYASlkDE-Gd-DF----NLVS-------SGEYTesTRDLVEIKFN--PTDFkRLKFKFKK--- 195  Clostridium perfrin...
Q8A3D9  291 PRNNGN--NGRFKETEIQYS--AD-Gh-TF---TKLIDkd----fQGSAT-----AGKVTFDq-TIQAkSFRFIVKSg-- 349  Bacteroides thetaio...
Q89ZX7  198 TRSG----NGNFGKVKVYTT--TNpDrsDY----TLQGey---dfKEQNA-----PSKVSFSe-GIKAtGIKFEVLS--- 255  Bacteroides thetaio...
Q89ZU9  296 SRNG----NGNFGAFELYIK--PQ-GstDF---IHIQDyd----fKGAGG-----SHRILLNd-PVVPaAVQFKVKS--- 352  Bacteroides thetaio...
Q8A5P4  238 SRDHG---EAWPQEMTMETS--LD-Gs-KWesaGTYSDl------PAGAK----EEFRSYFPg-FKQArYFRLTITA--- 296  Bacteroides thetaio...
2V72_A   72 PRTSGN--NGFITKYEIHAI--NN-Gv------ETLVA-------EGTWEe-NNLVKTVTFDs-PIDAeEIKITAIQ--- 128  Clostridium perfrin...
Q8VPE8 1389 SRQTGT--NGHPSEAKIYTS--AD-Gq-DW---HEVAT-------MKPNN--SKGVQRFDLPa-GTTGpWVKFSITKats 1449 Trueperella pyogenes
4MO3_M  162 WAQH--IALRLeV 172  pig
Q833V2 1110 --SVgnFGSGReM 1120 Enterococcus faecalis
Q8XKW1  418 --SKqnSATLNeL 428  Clostridium perfringens
Q8XKW1  196 --ADqnWASSAeF 206  Clostridium perfringens
Q8A3D9  350 SGDGqgFASCAeM 362  Bacteroides thetaiotaomicron
Q89ZX7  256 --GLgdFVSCDeM 266  Bacteroides thetaiotaomicron
Q89ZU9  353 --GLndFVSCDeM 363  Bacteroides thetaiotaomicron
Q8A5P4  297 VYSGkwATVVAeI 309  Bacteroides thetaiotaomicron
2V72_A  129 --GVggFASIAeL 139  Clostridium perfringens
Q8VPE8 1450 TVAGkaFGSAAeF 1462 Trueperella pyogenes
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