Conserved Protein Domain Family
Radical_SAM_C

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pfam16199: Radical_SAM_C (this model, PSSM-Id:292816 is obsolete and has been replaced by 465061)
Radical_SAM C-terminal domain
This domain is found as a C-terminal extension to a subset of Radical_SAM domains. It is found in archaeal, bacterial, fungal, plant and human proteins.
Statistics
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PSSM-Id: 292816
Aligned: 636 rows
Threshold Bit Score: 38.505
Created: 16-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8R646       211 GLKLHLMYVVKNTPLEKLYQSGNLKVHTKEEYIEKIVNIL-ENISPEIVIHRMTGD-G-NRETL------VAPLWSIKKI 281 Fusobacterium n...
Q8TZ93       217 AVKLYPLVVLERTDLERMYYDRRYKPLSYREYIRLLADAL-ERMAPTVLIQRLSKD-RaPDEER------IEPEWDLYRM 288 Methanopyrus ka...
Q57910       228 AVKIYPLVVVKGTKLEEMYWKGEYRTLDENQYISLVCDFL-EHLSPYVLIQRLSKD-KvPESIK------VSPEWYLGRL 299 Methanocaldococ...
Q6LX57       238 ALKIYPLVVVENTKLEEIYWKGEYKSLDEKQYIHLVADFL-EHISKYVIIQRVSKD-KvPEEIK------ISPEWSLKRL 309 Methanococcus m...
WP_013799498 223 aLKIYPLVVVKNTKLEEMYWRGEYRALDEKQYINLVCDFL-EHLSPYVLIQRISKDkV-PEDIK------VSPEWSLSRL 294 Methanotorris i...
WP_048187530 251 ALKIYPLVVIENTKLEEMYWNAEYKSLDKIQYVGLVIDFL-ENISPQILIQRISKD-KvPNEIK------ISPEWDLGRL 322 Methanococcus v...
WP_022297771 210 CLRIYPVYVLKDSKLYEMYENKEYTPLSVDDAIERVYYILkECKKTDVKIIRIGL--Q-TTDEItssnsqILGPVC-DNF 285 Clostridium sp....
WP_022028569 212 ELRIYPVYILEESELYEMYKEGKYEPLTLDEAIKRVLSVMhICMQTNIKVIRIGL--Q-ATETItktnshVLGPVC-DNF 287 Clostridium sp....
WP_021954266 220 DMRIYPVYVIHPSKLYDLYIDGKYIPLTLDETIKRVGIILrYCQKTNVRIIRLGL--Q-STDEItvsnkeIAGPVC-DNM 295 Clostridium sp....
WP_013885326 176 GFRLYPTVIFKNTPLEKYYKVGEYTPLTLSEALQICLYCTaACISNGTEILRIGI----PTENLdys-diAAGPFH-PAF 249 Flexistipes sin...
Q8R646       282 DVLNSIHKELKK 293 Fusobacterium nucleatum subsp. nucleatum
Q8TZ93       289 RVISDVRKELAR 300 Methanopyrus kandleri
Q57910       300 KIMNKVSEILKK 311 Methanocaldococcus jannaschii DSM 2661
Q6LX57       310 RILNEVSKLLDK 321 Methanococcus maripaludis
WP_013799498 295 RILNEVNKELER 306 Methanotorris igneus
WP_048187530 323 KILNEVSNNLKS 334 Methanococcus voltae
WP_022297771 286 AEY--VLSKivl 295 Clostridium sp. CAG:465
WP_022028569 288 AEY--VLAGLAR 297 Clostridium sp. CAG:1219
WP_021954266 296 AEY--VISDLLR 305 Clostridium sp. CAG:921
WP_013885326 250 GDL--IRtlalm 259 Flexistipes sinusarabici
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