Conserved Protein Domain Family
Snapin_Pallidin

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pfam14712: Snapin_Pallidin (this model, PSSM-Id:291383 is obsolete and has been replaced by 464275)
Snapin/Pallidin
This family of proteins includes Snapin, this protein is associated with the SNARE complex, which mediates synaptic vesicle docking and fusion. It also includes the yeast snapin-like protein SNN1, which is a part of a complex involved in endosomal cargo sorting. The family also includes pallidin, a component of a complex involved in biogenesis of lysosome-related organelles.
Statistics
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PSSM-Id: 291383
Aligned: 73 rows
Threshold Bit Score: 44.8255
Created: 24-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8GXI5        36 AMARGLSAMLESVIKDFDSKALDTLNSQDELSGSLDRLVQELDqLLENAP-LPFIVQHASRISSVKQRVSSLNLVLKSVQ 114 thale cress
BAJ91394      51 tLAAAIAGVLGGALEEHEARAEATAQSQAELATAIDRLNGELDkLLENAPsPV-IAQHAARISSIRKRVLALNMLLKSIQ 129 domesticated ba...
XP_008677020 130 ALASAIAGVLAGALREHEERAAATARSQDEVAAAIDRLNGELDrLLENAPtMV-IMHHSARISSIRKRISAMNMLLKSIQ 208 Zea mays
XP_009385045  40 ALAGAIASTLGAVMREFDSRAEGVDRSQDELSTSLDRLARELDkLLEDAPl-PFIMQHAAKISAMRRRVSALNLILKSIQ 118 wild Malaysian ...
XP_001770339   5 VIAQGLAAVLGPVVREFDARVEGALKSQSLLTGSIDRLTKELDkLLEDTPi-PTVAQHAAKLSDVRKRVASLMSTLRVIQ 83  Physcomitrella ...
XP_006836418  83 AMARAISSMLTSVMTEFDFRAGNVIRSQDMLGGSIDRLTLELDkLLEDAPl-PFVMQHAAKLTGVRKRISSLNSVLKVIQ 161 Amborella trich...
XP_002902117   8 AFAQGMFVTLWPKIERCHDYVELLLAAQEKLQQTVDVLIAGLQeAEKAEG--SSLVSYADRLRNFPSRVERLQKKLTRIQ 85  Phytophthora in...
XP_002961298  89 VIGTGRAAVLKGVIHDADSKFEAALASQDSLALSIDRLTRVLDkLLEDTP-MPFLAQDSARVHGLRKRVLSLSSTLQIIR 167 Selaginella moe...
XP_006676118  13 nitaGLVDNLVPVLQALDMGVISAVQSQGELHAEMERLAAELQlVSSGLKpPPETDLAAERLIAIRKRMMTLQKKLRTLE 92  Batrachochytriu...
XP_650580    172 yFQKAFSTTFVPQLKETETEVNELIQIQGLLDNQLKVLYDKLKeMERILSpPSYIED-LNRIIKIQKRIDRINAVLTQIE 250 Entamoeba histo...
Q8GXI5       115 RRIDNID 121 thale cress
BAJ91394     130 RRIDNID 136 domesticated barley
XP_008677020 209 RRIDSMD 215 Zea mays
XP_009385045 119 RRIDNMD 125 wild Malaysian banana
XP_001770339  84 GRITNMD 90  Physcomitrella patens
XP_006836418 162 HRIDNID 168 Amborella trichopoda
XP_002902117  86 DRLMAMK 92  Phytophthora infestans T30-4
XP_002961298 168 VRMKNIE 174 Selaginella moellendorffii
XP_006676118  93 DVVYKIs 99  Batrachochytrium dendrobatidis JAM81
XP_650580    251 TRITVLM 257 Entamoeba histolytica HM-1:IMSS
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