4B87


Conserved Protein Domain Family
DRMBL
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pfam07522: DRMBL (this model, PSSM-Id:284854 is obsolete and has been replaced by 429512)
DNA repair metallo-beta-lactamase
The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in pfam00753 and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in DNA repair.
Links
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Statistics
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PSSM-Id: 284854
Aligned: 34 rows
Threshold Bit Score: 97.339
Created: 26-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4B87_A       241 PEINSLITTDMCSSLVHLL-PMMQIN----FKGLQSHLKkcggkYNQILAFRPTG--WTHSNKFTRIADVI-PQT----- 307 human
Q8LQQ4       223 DDNQEIFTTQTSLTRIRAV-PRYSLT----IESLDALNT-----VCPTIGIMPSGipWLWKNSKGKAKSGVkSPAksirc 292 Japanese rice
Q4Q2L8       388 EHLLSVFLVPMASVGYRAVaALAHADgp-aVMDMEDGLAlnldrYDQVLMVEPTG--WSKRCVAREVSE----------- 453 Leishmania major
Q5QJC2       239 PEILYHITTD-RYTQIHAC-RHPKDDdyvrGNRLPCGITcqngtPLHVISIKPSTmwFGERIKKTNVIVRTgES------ 310 chicken
Q5RGE5       239 PEILCHVTTN-RATQIHAC-RHPKDEeffrANRLPCGSTapdgiPLNIISIKPSTiwFGERTRKTSVVVKMgSS------ 310 zebrafish
Q96SD1       239 PEILHHLTTD-RNTQIHAC-RHPKAEeyfqWSKLPCGITsrnriPLHIISIKPSTmwFGERSRKTNVIVRTgES------ 310 human
Q8RZQ7       227 SLIAPEIITEDPSCRFQIL-GFQNLY----DKACTKIEEaraslQPEPLFIRPSTqwYAHCAQS----------Qkpsl- 290 Japanese rice
Q6ZD68       209 SLVAPEILTDDSSSRFQVI-GFPRLS----ERATEMLALarakhQPEPLIIRASSqwYAYYEPPEGSTK-----Rkpal- 277 Japanese rice
XP_001296993 225 YCSESCFTNDPTKTRVYLV-PIMDCN----SVSASVWAKqn--gYSSVCAIAATG--WSGKAGWKNPQITYqGP------ 289 Trichomonas vag...
XP_001322027 231 FAKPELFSEDPYLTRIHLL-PIQECG----KEKVSLYAAsm--gFDSVTAIRPSG--WNGRPFWRCPTFDIyNE------ 295 Trichomonas vag...

4B87_A       308 -------------------KGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVG 346 human
Q8LQQ4       293 kgldegaiemdydplsppkLFEKDSYSLPYSEHACFAELENFMLIVRPSTVIGIVSTS 350 Japanese rice
Q4Q2L8       454 ---------------------KYTLLRVPYSEHCAFHELLEFVAFVNPARVVPTVSEE 490 Leishmania major
Q5QJC2       311 ------------------------TYRACFSFHSSYSEIMDFLSYIRPVNVYPNVLPV 344 chicken
Q5RGE5       311 ------------------------SYRACFSFHSSYLEVKDFLSYICPVNIYPNVIPL 344 zebrafish
Q96SD1       311 ------------------------SYRACFSFHSSYSEIKDFLSYLCPVNAYPNVIPV 344 human
Q8RZQ7       291 ---------------teavLDGCGVWHICFSIHSSRDELEQALELLQPQWVISTTPPC 333 Japanese rice
Q6ZD68       278 ---------------tepmRDEFGVWHVCFSMHSSREELEQALRFIQPKWVISTTPPC 320 Japanese rice
XP_001296993 290 --------------------IKVTLYEVPYSDHSSPQELLNFVKVVKPKKLVSTTSRS 327 Trichomonas vaginalis G3
XP_001322027 296 --------------------IKVTSYDVPYSDHSSPMELTEFVKAVKPAKVIPTTTKN 333 Trichomonas vaginalis G3
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