Conserved Protein Domain Family
SBP56
?
pfam05694: SBP56 (this model, PSSM-Id:283374 is obsolete and has been replaced by 461716)
56kDa selenium binding protein (SBP56)
This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins, in vesicular Golgi transport.
Links
?
Statistics
?
PSSM-Id: 283374
Aligned: 22 rows
Threshold Bit Score: 727.555
Created: 24-Jun-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Q9VFZ4         6 CCRGPGYATPLDAMrSGPREKLLYTVTVQPNLDePHGDYLSTVDVDPESPTYCQIVHRTFTNRKGDELHHSGWNAC-SSC 84  fruit fly
Q5V0D5        19 DHEGPGYATPQAAIeAAEPEQTAYVMGLHVGQDvDAPDFLAVVDLDPDSDTYSEIINRVQMPNKGDELHHFGWNACsSSC 98  Haloarcula mari...
Q8RZW7        13 gaTGPGYATPLEAMeKGPREKLLYVTCVYNGTGiNKPDYLGTVDVDPNSPTYSQVIHRLPVTHVGDELHHSGWNAC-SSC 91  Japanese rice
Q93WN0        20 CKSGPGYATPLAAM-AGPREKLIYVTALYSGTGrDKPDYLATVDVDPSSPTFSSVIHRLKMPYIGDELHHTGWNSC-SSC 97  thale cress
Q9LK38        13 CKSGPGYATPLLAM-SGPREKLIYVAAIYTGTGqAKPDYLATVDVEPSSSTYSSVIHRLPMPYLEDELHHSGWNSC-SSC 90  thale cress
Q63836         6 TKCGPGYPTPLEAM-KGPREEIVYLPCIYRNTGtEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTC-SSC 83  house mouse
Q569D5         5 gSCGPGYKTPLDAM-KGPREEILYLPCIYRNTGiNKPDYLATVDVNPKSPKYSQVIHRLPMPNTNDELHHSGWNTC-SSC 82  western clawed ...
XP_005024075   5 gaCGPGYATPLDAM-KGPREEILYLPCIYRNTGiEKPDYLATVDVDPKSPHYCQVIHRLPMPNLKDELHHSGWNAC-SSC 82  mallard
CAF90090       2 sgCGPGYRSPLEAM-KGPREKIVYLPCIYRNTGtLKPDYLATVDVEPTSPTYCKVVHRLPMPNLGDELHHSGWNAC-SSC 79  spotted green p...
XP_002632727   7 CHGGPGYASPADAI-KGPREEVLFVTAPHARDG---PDAIFTVNVNPESETFCQIISRVDVPNIGDEVHHTGWNAC-SSC 81  Caenorhabditis ...

Q9VFZ4        85 YyvDESSKtvpKRDRLVLPSLNSDFIYILDVVTDPRKPEIVKTIDG-DVLKSHNVTAPHTTHCLANGnIMISVMGDAEGY 163 fruit fly
Q5V0D5        99 H--MDGL----ERRHLVIPGQRSSRIHIVDTK-ERRDPELTKVIEPeEVYEH-DLSAPHTVHCIPDGeILISMLGDADGD 170 Haloarcula mari...
Q8RZW7        92 H--GDPSA---SRRFLILPSLLSGRVYVVDTLKDPRAPALHKVVEAeDIAEKTGLGFPHTSHCLASGeIMISCLGDKEGN 166 Japanese rice
Q93WN0        98 H--GDASA---DRRYLVLPGLISGRIYAIDTKTDPKAPSLYKVVEPkEIAEKTGLAFPHTSHCLASGdMLVSCLGDKEGN 172 thale cress
Q9LK38        91 Y--GDSSC---ERRYLILPSLLSGRIYVIDTKTNPREPSLHKFVDPaEVLEKTGLAYPHQPHCLASGdVLVSCLGDEDGN 165 thale cress
Q63836        84 F--GDSTK---SRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEAsEIQAKCNVSNTHTSHCLASGeVMVNTLGDLQGN 158 house mouse
Q569D5        83 Y--GDASK---VRNKLILPCLISSRIYVVDVGTDPRAPRIHKTVEPyEVFWKCGLANLHTSHCLGCGeIMISSIGDPYGN 157 western clawed ...
XP_005024075  83 Y--GDASK---RRNRLILPSLISSRIYVVDVGTDPKAPRIHKVVEPvELFWKGNVANPHTSHCLGNGdILISCLGDPSGN 157 mallard
CAF90090      80 F--GDASK---KRNRLILPSLISSRIYVVDVETDPRAPRIHKMVEPvDLFWKCGLANPHTTHCLGNGqIMISCLGDPAGN 154 spotted green p...
XP_002632727  82 H--DKPTE---KRSHLIVPCLNSDRIYVINVE-NEREIYLQHTIEPsKLHA-LNLSFPHTSHCLADGnIMISTLGEADGS 154 Caenorhabditis ...

Q9VFZ4       164 AKG-DFILFDSD-FNCIGTWTKGDKKALCGYDFWYQPYFDVMVSSEWGAPNKWRRGWKNVDLEDMsQYGCRLNFYKWSTQ 241 fruit fly
Q5V0D5       171 LPG-GFLELNDD-FEVQGRWDPPGE-IEMNYDYWYQPRQNVMLSTEWAAPKTYYPGFDLDDVEDG-KYGQRLNFWDWEDG 246 Haloarcula mari...
Q8RZW7       167 AAGnGFLLLDSE-FNVKGRWEKPGHSPLFGYDYWYQPRHKTMISSSWGAPAAFRTGFDLQHVQDG-LYGRHLHVYDWPGG 244 Japanese rice
Q93WN0       173 AKGnGFLLLDSD-FNVKSRWDKPGHGPLFGYDFWYQPRFKTMISTSWGAPKAFSKGFNLQHVADG-LYGSHLHIYQWPEG 250 thale cress
Q9LK38       166 AEGsGFLLLDSE-FNIKGRWEKDGNSPLYGYDFWYQPRHKTMISTSWGAPAAFTKGFDLKDVSDG-LYGKHLHVYSWPQG 243 thale cress
Q63836       159 GKG-SFVLLDGEtFEVKGTWEKPGGASPMGYDFWYQPRHNVMVSTEWAAPNVFKDGFNPAHVEAG-LYGSRIFVWDWQRH 236 house mouse
Q569D5       158 GKG-GFVLLDGEtFEVKGNWEAEGEAAPFGYDFWYQPRHNVMISTEWGAPKAFALGFKMEEVQAG-MYGHSLNVWDWTEH 235 western clawed ...
XP_005024075 158 GKG-GFLLLDGEtFEVKGNWEKGEKVPPFGYDFWYQPRHNVLMSTEWGAPKVLANGFNPADVEKG-HYGRHINVWDWNSH 235 mallard
CAF90090     155 GKG-GFVLLDGQtFQVVGNWEHPGEAAPFGYDFWYQPRHNVMISTEWGAPKALAHGFDPADVAAG-HYGRCLHVWDWSTH 232 spotted green p...
XP_002632727 155 PSG-NFLLLDGKtFEPKGTWPADGKVVPFNYDFWYQPRRNIMISTEWGSPNHIKKGFNPAHVPEG-LYGNSVHIFEWDTK 232 Caenorhabditis ...

Q9VFZ4       242 TLYQTIDLG-SDGITPLEIRFLHNPKKAEGFVGCALNAKVFHFKKkSDSDe-FEAKKVIDIPGKLVDtgSGVAEDM---- 315 fruit fly
Q5V0D5       247 VIEQTIDLG-EDGLIPLEARFLHTPESTHGYVGAALSSNIIHFHEsDGRY---HAEPVIEFDDREHE--GWDMPV----- 315 Haloarcula mari...
Q8RZW7       245 ELKQTLDLG-STGLLPLEVRFLHDPSKDTGYVGCALTSNMVRFFKtADGS--WSHEVAISIKPLKVR--NWILPEM---- 315 Japanese rice
Q93WN0       251 EMKQIIDLG-NTGLLPLEIRFLHDPSKDTGYVGSALSSNMIRFFKnSDDT--WSHEVVISVKPLKVE--NWILPEM---- 321 thale cress
Q9LK38       244 ELKQILDLG-DTGLLPLEVRFLHEPDKATGFAGCALSSTLVRFFKnDDET--WSHEVAISVEPLKVE--NWILPEM---- 314 thale cress
Q63836       237 EIIQTLQM--TDGLIPLEIRFLHDPSATQGFVGCALSSNIQRFYKnEEGT--WSVEKVIQVPSKKVK--GWMLPEM---- 306 house mouse
Q569D5       236 RRIQTIDLG-EDGLIPLEIRFLHDPDAAQGLVGCALSSTVFRFYKeKDGK--WAAEKVIKVPSKKVE--GWALPEM---- 306 western clawed ...
XP_005024075 236 TYIQKIDLG-KDS-IPLEIRFLHNPDAAEGFVGCALNSTVHRFYKtEKGN--WAAEKVIEVPSKKVQ--GWLLPDM---- 305 mallard
CAF90090     233 RKLQTIDLG-EDGGIPLEVRFLHQPSAAQGYVGCALSGSVFRFYRtAEGD--WAAEPVITVPSKKVE--GWILPEMpges 307 spotted green p...
XP_002632727 233 KHLQTIDLPmPRGALPLEVRFLHEPTSEHAFVGCALGSAIFRIHPdEKNPkvQTASLVATIPSKKVE--NWALPDM---- 306 Caenorhabditis ...

Q9VFZ4       316 ------------------GGMISDIIISLDDRFLYVNCWRHGDVRQYDITDPENPKLTGQLFLGGAICSDlpnvivkedk 377 fruit fly
Q5V0D5       316 ------------------PALVTDILISMDDRYLFGSSWLHGEVWMYDISDPSNPRKADSISIGGYFGDI---------- 367 Haloarcula mari...
Q8RZW7       316 ------------------PGLITDFVISLDDRYLYLVNWLHGDIRQYNIEDPAKPVLAGQVWAGGLLQKGsevvyvte-d 376 Japanese rice
Q93WN0       322 ------------------PGLITDFLISLDDRFFYFVNWLHGDIRQYNIEDPKNPVLTGQIWVGGLLQKGspykavge-d 382 thale cress
Q9LK38       315 ------------------PGLITDFLISLDDRFLYCSNWLHGDIRQYNIEDPKTPVLTGQIHVGGLVQKGslvlalge-e 375 thale cress
Q63836       307 ------------------PGLITDILLSLDDRFLYFSNWLHGDIRQYDISNPQKPRLTGQIFLGGSIVRGgsvqvled-q 367 house mouse
Q569D5       307 ------------------PGLITDILISLDDRFLYFSNWLHGDIRQYDITDPRNPKLVGQIFLGGSILRGgpvtvled-k 367 western clawed ...
XP_005024075 306 ------------------PGLITDVLISLDDRFLYFSNWLHGDIRQYDISNTRKPKLVGQVFLGGSIIKGgpvtvved-k 366 mallard
CAF90090     308 vtrlspvchpsvsspvvlPGLITDILISLDDRFLYFSNWLHGDVRQYDITDRTKPRLVGQVFLGGSIVSDgpvkvle--- 384 spotted green p...
XP_002632727 307 ------------------PALITDILISMDDRFLYVSCWLHGDIRQYDISDPKNPKLNSQVFIGGSIHSEttvkvle--- 365 Caenorhabditis ...

Q9VFZ4       378 elkerpPARYVKGRRLEGGPQMLQLSLDGKRLYVSSSLYSPWDKQFY-PKMVsqGGHIVLIDVDTVNGGISLNEDFLVDF 456 fruit fly
Q5V0D5       368 --------EQVQGRDIVAGPQMLQLSLDGERLYWTTSLFSSWDNQFF-PEEAekGSVMLKADVDPRTGTMSLDRDFLVDF 438 Haloarcula mari...
Q8RZW7       377 dkeeqySVPQVKGHRLRGGPQMIQLSLDGKRIYVTNSLFSRWDEQFYgQDLVkkGSHMLQIDVDTEKGGLSINPNFFVDF 456 Japanese rice
Q93WN0       383 gntyqfDVPQIKGKSLRAGPQMIQLSLDGKRLYATNSLFSAWDRQFY-PEIMekGSHIIQIDVDTDKGGLTLNPDFFVDF 461 thale cress
Q9LK38       376 gkafqfDVPKIKGQRLRGGPQMFQLSLDGKRLYVTNSLFSVWDRQFY-PELVekGSHMLQIDVDTDKGGLSINPNFFVDF 454 thale cress
Q63836       368 eltcqpEPLVVKGKRIPGGPQMIQLSLDGKRLYATTSLYSDWDKQFY-PDLIreGSVMLQVDVDTVNGGLKLNPNFLVDF 446 house mouse
Q569D5       368 dlecqpDPVIVKGKKVPGGPQMIQLSLDGKRLYVTNSLYSKWDKQFY-PDMIkeGSVMLQIDVDTEKGGLKLNPNFLVDF 446 western clawed ...
XP_005024075 367 elqcqpEPFMIKGKRVQGGPQMIQLSLDGKRLYVTSSLYSGWDKQFY-PDLVkeGSVMLQVDVDTERGGLKVNKNFLVDF 445 mallard
CAF90090     385 qpekqpRPRFIQGRRVPGGPQMLQLSLDGLRLYVTTSLYSGWDQQFY-PDMIkeGSVMMQIDVDP-AGGLSVNENFLVDF 462 spotted green p...
XP_002632727 366 edhdeiPALYVKGRQIEGGPQMLQLSLDGKRLYVSTSLYKKWDDQFY-PENVrsGATMLQIDVDPITGHMVINKNFLIDF 444 Caenorhabditis ...

Q9VFZ4       457 ANepygpSLPHEMRYPGGDCTSDIWL 482 fruit fly
Q5V0D5       439 GDlpegpARAHEIRWPDGDCTSDVWQ 464 Haloarcula marismortui
Q8RZW7       457 GAepegpSLAHEMRYPGGDCTSDIWI 482 Japanese rice
Q93WN0       462 GDepdgpALAHEMRYPGGDCTSDIWI 487 thale cress
Q9LK38       455 GTepdgpSLAHEMRYPGGDCTSDIWV 480 thale cress
Q63836       447 GKeplgpALAHELRYPGGDCSSDIWI 472 house mouse
Q569D5       447 GKepggpVLAHELRYPGGDCSSDIWV 472 western clawed frog
XP_005024075 446 GKepdgpVLAHEIRYPGGDNTSDIWI 471 mallard
CAF90090     463 GQepdgpVLAHEVRYPGGDCTSDIWL 488 spotted green pufferfish
XP_002632727 445 GKvpggpYLAHEMRYPGGDCTSDIWI 470 Caenorhabditis briggsae
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap