1BP1


Conserved Protein Domain Family
LBP_BPI_CETP_C

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pfam02886: LBP_BPI_CETP_C (this model, PSSM-Id:280959 is obsolete and has been replaced by 397154)
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LBP / BPI / CETP family, C-terminal domain
The N and C terminal domains of the LBP/BPI/CETP family are structurally similar.
Statistics
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PSSM-Id: 280959
Aligned: 10 rows
Threshold Bit Score: 250.739
Created: 17-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1BP1_A       218 ETLDVQMK------G----EFYSENHHNPPPFAPPVMEFP--AAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMI 285 human
P55058       228 SNLDMDFR------G----AFFPLTERNWSLPNRAVEPQL--QEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKV 295 human
Q18869       293 NTVELASWgeisfmGqgdtPFGPVDASWPGRSPFKTNVVDsvTNKDSMIELVVSDFLPNSLLYHAYVQRFIKVLLTPRTK 372 Caenorhabditis ...
P17453       244 NNLDWLLK------G----EFFSLAHRSPPPFAPPALAFP--SDHDRMVYLGISEYFFNTAGFVYQKAGALNLTLRDDMI 311 cattle
Q63313       241 QTLDVMFK------G----EIFNRNHRSPVTTPTPTMSLP--EDSKQMVYFAISDQAFNIATRVYHQAGYLNFTITDDML 308 Norway rat
P18428       241 QMLEVMFK------G----EIFHRNHRSPVTLLAAVMSLP--EEHNKMVYFAISDYVFNTASLVYHEEGYLNFSITDDMI 308 human
P17454       242 GMLDVMFK------G----EIFPLDHRSPVDFLAPAMNLP--EAHSRMVYFSISDYVFNTASLAYHKSGYWNFSITDAMV 309 rabbit
Q17654       231 HHVDVRMRsdliwdD----EFVESG-MVENSTLASVEALP---RSTRMIDMFIDEHTVQSIIAAAHFAGHLKTKIESPFL 302 Caenorhabditis ...
O17768       298 GAVNMMSKgeisyrGqggtPFFPPN----VRIPPP-HGVH-------MIEFYASDYLANSMLYHSYRQKFLDVTVGPESS 365 Caenorhabditis ...
XP_014981712 178 SYLESHHK------G----YFIYKN-VSEDLPLPTFSPAL--LGDSRMLYFWFSEQVFHSLAKVAFQDGRLTLSLMGDEF 244 Rhesus monkey
1BP1_A       286 PKESKFR---LTT-----KFFGtFLPEVAKKFPNMKIQIHVSASTPPHLSVQPT-GLTFYPAVDVQAFAVL--PNS-ALA 353 human
P55058       296 PHDLDML---LRA-----TYFG-SIVLLSPAVIDSPLKLELRVLAPPRCTIKPS-GTTISVTASVTIALVP--PDQ-PEV 362 human
Q18869       373 GVSSFLRttcEGS-----FCISdLAPQLAEQYPNSTVELAMSATRAPAVLFSEKnGGTISVSLGGLVVVFA--VNGnQRR 445 Caenorhabditis ...
P17453       312 PKESKFR---LTT-----KFFGiLIPQVAKMFPDMQMQLFIWASLPPKLTMKPS-GLDLIFVLDTQAFAIL--PNS-SLD 379 cattle
Q63313       309 PPDSNIR---LNT-----KAFRpFTPLITRKYPDMNLELLGTVVSAPLLNVSPG-NLSLAPQMEIEGFVIL--PSS-ARE 376 Norway rat
P18428       309 PPDSNIR---LTT-----KSFRpFVPRLARLYPNMNLELQGSVPSAPLLNFSPG-NLSVDPYMEIDAFVLL--PSS-SKE 376 human
P17454       310 PADLNIR---RTT-----KSFRpFVPLLANLYPNMNLELQGTVNSEQLVNLSTE-NLLEEPEMDIEALVVL--PSS-ARE 377 rabbit
Q17654       303 KTSCDVL------------CIGtVLPELAEQVPNRTLSVEAATLSPPVIDLQQG-RALVYLNASLNVFAAP--PLKtVEG 367 Caenorhabditis ...
O17768       366 PQLQGLL---LTScgpagFCLGeFLGTLGEQFPDRQVEIEFFAKKAPLIVFIDD-RSRFRLHGGLNMYVRPskPNQ-VKQ 440 Caenorhabditis ...
XP_014981712 245 KAVLETW---GFN-----TNQE-IFQEVVGGFPS-QAQVTVHCLKMPKISCQNK-GVVVNSSVMVKFLFPR--PDQ-QHS 310 Rhesus monkey
1BP1_A       354 SLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDI-MnyIVPILVLPRVNEKLQKGFPLPTP-A 431 human
P55058       363 QLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAP-LktMLQIGVMPMLNERTWRGVQIPLP-E 440 human
Q18869       446 QVIVVDLDVVADARLSIQGHNVSGSVELRKFDLKRRTGTVDISDAEIDDIA-L--LVSQLSENLLNGLLVNGMPIPLP-H 521 Caenorhabditis ...
P17453       380 PLFLLEMNLNLSVVVGAKSDRLIGELRLDKLLLELKHSDIGPFSVESLQSV-InyVMPTIVLPVINKKLQKGFPLPLP-A 457 cattle
Q63313       377 SVFRLGVVTNVFVSLTFDNSKVTGMLHPEKAQVRLIESKVGMFNVNLFQAF-LnyYLLNSLYPDVNDELAKGFPLPLP-R 454 Norway rat
P18428       377 PVFRLSVATNVSATLTFNTSKITGFLKPGKVKVELKESKVGLFNAELLEAL-LnyYILNTFYPKFNDKLAEGFPLPLL-K 454 human
P17454       378 PVFRLGVATNVSATLTLNTRKITGFLKPGRLQVELKESKVGGFNVELLEAL-LnyYILNNLYPKVNEKLAHRFPLPLL-R 455 rabbit
Q17654       368 SMLTINVETEFTLTMEMRNKRVKGYINMINAQANLVDSKVGLMSQKTVDFL-Vn-MSTPFLEDAVDVLIGRGLIVADP-- 443 Caenorhabditis ...
O17768       441 QILKADTTMTANVNLWINGSIIVGNSTIENLDFKLLETKINDVDQDSFSDLgL--FGAEFLEKLLTEILQMGIALPTM-Q 517 Caenorhabditis ...
XP_014981712 311 VAYTFEEDIMTTVQASYSKKKLFLSLLDFQITP-KTVSNLTESSSESVQSF-LqsMITTVGIPEVMSRLEAVFTALMNsK 388 Rhesus monkey
1BP1_A       432 RVQL--YNVV---LQPHQNFLLFGADVVY 455 human
P55058       441 GINF--VHEV---VTNHAGFLTIGADLHF 464 human
Q18869       522 VLRI--KDSH---INVLSRRMHIQVDVDV 545 Caenorhabditis elegans
P17453       458 YIEL--FNLT---LQPYQDFLLFGADVHY 481 cattle
Q63313       455 RIKL--HDLD---FQIHKNFLYLGANVQY 478 Norway rat
P18428       455 RVQL--YDLG---LQIHKDFLFLGANVQY 478 human
P17454       456 HIQL--YDLL---LQTHENFLLVGANIQY 479 rabbit
Q17654       444 -FQFpsTNEH---LSIHDKCLRWEADIVM 468 Caenorhabditis elegans
O17768       518 GVIL--KSPK---LTFHDRYLKVSTYFKL 541 Caenorhabditis elegans
XP_014981712 389 GLSL--FDIInpeIITRDGFLLLQMDFGF 415 Rhesus monkey
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