1TIS,3UWL,3KJS,3KGB,3NRR,4G9U,2AAZ,4EIL


Conserved Protein Domain Family
Thymidylat_synt

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pfam00303: Thymidylat_synt (this model, PSSM-Id:278719 is obsolete and has been replaced by 459753)
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Thymidylate synthase
This is a family of proteins that are flavin-dependent thymidylate synthases.
Statistics
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PSSM-Id: 278719
Aligned: 559 rows
Threshold Bit Score: 203.784
Created: 6-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1TIS_A         2 KQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKG-FPAVTTKKL---AWKACIAELIWFLSGSTNVNDLRliqh 77  Enterobacteria ...
WP_013010686   2 QVYKDMVRYVMDNGVYLPNRTGVATYSVFSYFYRVNLADG-YPLLTTKKM---FFNSMVHELFWYLSGEEHIKDLR---- 73  Denitrovibrio a...
WP_015768937   2 KQYLDMVKYVLDNGVKKENRTGVDTISTFAYSYKVDLSEG-YPLLTTKKM---YFNSMLHELFWYLSGEEHIKNLR---- 73  Leptotrichia bu...
WP_015300711  11 QQYLDLVDDVLASGTYKPNRTGVDTISRFSRHYEVDLQEG-YPLLTTKQMdgyRWNSMIHEVCWYLSGEEHIRTLR---- 85  Halovivax ruber
WP_015320805   2 RQYLDLVDAVLSGGTHKPNRTGVDTISSFSEHYEVDLREG-FPLLTTKKMdgyRWNSMLHEVAWYLSGQEHIRELR---- 76  Natronococcus o...
WP_005576871   2 QQYLELVDSALSGGTYKPNRTGVDTISSFSEHYEVDIKDG-YPLLTTKQMdgyRWNSMLHEVCWYLSGEEHVRNLR---- 76  Natronobacteriu...
AHF99366       2 RQYLELVDSVLSGGTHKPNRTGVDTISSFSEHYEVDLQEG-YPLLTTKAMdgyRWNSMIHEVCWYLSGEEHVRDLR---- 76  Halostagnicola ...
WP_020445394   2 QQYLDLVAGVLGEGTYKPNRTGVDTIAGFSRHYEVDLQEG-YPLLTTKQMdgfRWNSMLHEVLWYLSGQEHIRELR---- 76  Salinarchaeum s...
WP_014560969   2 KQYHDLVKLVMNEGVRKSSRTGVDTISYFGAFYRVDLSEG-FPLLTTKKM---EWKSLLYEVLWYLSGEEHIKNLK---- 73  Ignavibacterium...
WP_015160457   6 KTYLEILDRILTEGTRETNRTGTDTVSLFGLSYRLPVTTEaFPILTHKKI---QWRSLVTEMIWYLSGEPHIRNLQ---- 78  Chamaesiphon mi...
1TIS_A        78 dsliQGKTVWDenyenqakdlGY--HSGELGPIYGKQWRDF----------------------------GG--------- 118 Enterobacteria ...
WP_013010686  74 ----TKTKIWD----------AWadEEGLLETAYGRFWRRFpvpekglngen------wgkkwthkdpeTGqm------- 126 Denitrovibrio a...
WP_015768937  74 ----KKTKIWD----------AWadEEGRLQTAYGRFWRRYpvpeisldgevf----adednpwvtreeNGql------- 128 Leptotrichia bu...
WP_015300711  86 ----EETRIWD----------AWadDEGRLDTAYGRFWRRFpvpeesaqldges---wpddaqrwvteeADgr------- 141 Halovivax ruber
WP_015320805  77 ----EETKIWD----------AWadEDGHLDTAYGRFWRRYpvpdedaqlgses---wpdehhrwvteeDDgr------- 132 Natronococcus o...
WP_005576871  77 ----EETKIWD----------AWadEEGRLDTAYGRFWRRYpvpdegvqlages--wpddgqqwvtveeTDdges----- 135 Natronobacteriu...
AHF99366      77 ----EETEIWN----------AWadDAGHLDTAYGRFWRRYpipneegqleges---wpedghrwvteeADgr------- 132 Halostagnicola ...
WP_020445394  77 ----EETGIWN----------DWadEDGHLDTAYGRFWRRYpipeagqqlpges--wpddahrwvsveeVEtddgtdage 140 Salinarchaeum s...
WP_014560969  74 ----QHTKIWD----------AWadENGRLQTAYGRFWRRFpvpdksvaldgei--fvdennpfvkresNGal------- 130 Ignavibacterium...
WP_015160457  79 ----QHTKIWD----------AWsdADGNLETAYGRFWRYYpvpnytapirrgdsnylcdgevlvnldeSKyrhnlivde 144 Chamaesiphon mi...
1TIS_A       119 --------VDQIIEVID---RIKKLPND---RRQIVSAWNPAElKyMA-LPPCHMFYQFNVrngyLDLQWYQRSVDVFLG 183 Enterobacteria ...
WP_013010686 127 -------vFDQIQYVIDnlkEVKNNPNCsaqRRLVVSAWHPAN-AaESkLPPCHYTYCFSVkagkLNCHLTQRSGDIALG 198 Denitrovibrio a...
WP_015768937 129 -------vFDQIQYIIDtlkEMKTNPNHkngRRMIVLAWNPGN-AtISkLPPCHYTFAFNVlgnkLNCHLTQRSGDIALG 200 Leptotrichia bu...
WP_015300711 142 ------ttFDQLQYVID---TLSDSPNS---RRLVVNAWHPAN-AaVStLPPCHYTFVFNVqgdrLNCHLTQRSGDVALG 208 Halovivax ruber
WP_015320805 133 ------rtFDQLQYVVD---TLSDAPNS---RRLVVNAWHPAN-AaVStLPPCHYSFVFNVqgdrLNCHLTQRSGDVALG 199 Natronococcus o...
WP_005576871 136 -----rrvFDQLQYVVD---TLSDSPNS---RRLVVNAWHPAN-AaVStLPPCHYTFVFNVqgdrLNCHLTQRSGDIALG 203 Natronobacteriu...
AHF99366     133 ------rtFDQLQYVID---TLSENPNS---RRLVVNAWHPAN-AaVStLPPCHYTYVFNVqgdrLNCHLTQRSGDIALG 199 Halostagnicola ...
WP_020445394 141 gstterrvFDQIQYVLD---SLEENPNT---RRLVVNAWHPAN-AaVStLPPCHYTFVFNVqgdrLNCHLTQRSGDVALG 213 Salinarchaeum s...
WP_014560969 131 -------vFDQVGWVIN---EIKSNPNS---RRLVITAWHPAN-AvISkLPPCHYTFAFNVsngkLNCHLTQRSGDIALG 196 Ignavibacterium...
WP_015160457 145 kesivipcFDQLRWAID---ELKRNPRS---RRLHITAWYPPN-AtVSrLPPCHHSFTLNYqggkLNLHLQQRSSDHCVG 217 Chamaesiphon mi...
1TIS_A       184 LPFNIASYATLVHIVAKMCNLIPGDLIFSGGNTHIY-------------------------------------------- 219 Enterobacteria ...
WP_013010686 199 IPFNLSCYALLTMMLAKETGLKVGEFAHTIIDAHIY-------------------------------------------- 234 Denitrovibrio a...
WP_015768937 201 IPFNLACYSLLTMMIAKECGYEVGEFAHTIIDAHIY-------------------------------------------- 236 Leptotrichia bu...
WP_015300711 209 VPFNVAAYSLLTKVIANQTGFEPGTFGHTIVDAHVYcgtgergewyadnldalqdrladvd--------------draay 274 Halovivax ruber
WP_015320805 200 VPFNIAAYALLTKIVAEQTGFEPGTFAHTVVDAHVYcgrgergkwyadnladlqsrladve--------------kreey 265 Natronococcus o...
WP_005576871 204 VPFNIAAYALLTKVVAQQTGFESGTFAHTVVDAHVYcgrgdrgewyddnlealqsrlaead--------------dredy 269 Natronobacteriu...
AHF99366     200 VPFNIAAYALLTKVIAAQTGFEPGTFAHTVVDSHVYcgrgdrgewyadnlkalqsrlaavd--------------epaey 265 Halostagnicola ...
WP_020445394 214 IPFNVAAYSLLTEAIAQRTGFEPGTFSHTIVDAHVYcgsgdrgawyqenleelqerlaaveargdpeeprgadrqvsegy 293 Salinarchaeum s...
WP_014560969 197 IPFNLAAYSILTQIIAQETNLALGYFAHTIIDAHIYvadkg--------------------------------------- 237 Ignavibacterium...
WP_015160457 218 NPFNLTCYSLLLLLICREVNLNPGDFYHSITDAHIY-------------------------------------------- 253 Chamaesiphon mi...
1TIS_A       220 --------------------MNHVEQCKEILRREPKELCELVI-----SglpykfrylstkeqlkyVLKLRPKDF---VL 271 Enterobacteria ...
WP_013010686 235 --------------------ENHMEGLKEQLEREPLTLPKVEIad-------------------kpFDQLSFADI---KL 272 Denitrovibrio a...
WP_015768937 237 --------------------ENHIEGLKEQLTREPLKLAKIKIvd-------------------kpFNELTFEDI---ML 274 Leptotrichia bu...
WP_015300711 275 rdvrdwieatappeaagaenMDHVPGLLEQCAREPLSRPTLSVad-------------------vsIDDITADDV---EL 332 Halovivax ruber
WP_015320805 266 lavkewleseapaeadgderLDHVPGLLEQCSREPLERPTLEIgd-------------------asIDDFSVADL---EL 323 Natronococcus o...
WP_005576871 270 lsvkewleseappeaegderLDHVPGLLEQLSRDPLERPTLEVad-------------------asIDDLTYEDV---SL 327 Natronobacteriu...
AHF99366     266 rdvkswlessapeeaegderLDHVPGLLEQLAREPLERPTLSVad-------------------vsIDELTAEDV---SL 323 Halostagnicola ...
WP_020445394 294 revrewilrnapdeaegdegSDHVPELLTQLTREPRERPEIEIad-------------------vpLDELTFEDI---EL 351 Salinarchaeum s...
WP_014560969 238 ---------------sptekYDHLEGLKLQLTREPFPLPQLKIak-------------------kpIDELQFEDF---EL 280 Ignavibacterium...
WP_015160457 254 --------------------VDHIEP-YRNASREAYVLPQLDLsqlgdRs----------------MFDLTYDDIdrlQL 296 Chamaesiphon mi...
1TIS_A       272 NNYVSHPPIKGKMAV 286 Enterobacteria phage T4
WP_013010686 273 VDYESHPGIRFEVAV 287 Denitrovibrio acetiphilus
WP_015768937 275 EDYESHPVIKFEVAV 289 Leptotrichia buccalis
WP_015300711 333 RDYESHDGLTFGVAe 347 Halovivax ruber
WP_015320805 324 REYDSHEGLRFAVAe 338 Natronococcus occultus
WP_005576871 328 QGYESHEGIQFSVAe 342 Natronobacterium gregoryi
AHF99366     324 EDYESHDGLEFAVAe 338 Halostagnicola larsenii XH-48
WP_020445394 352 RNYGAHPGLSFAVAe 366 Salinarchaeum sp. Harcht-Bsk1
WP_014560969 281 IGYQHHPKIKFEVAV 295 Ignavibacterium album
WP_015160457 297 VNYQHGAFIKLPVAV 311 Chamaesiphon minutus
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