2P01,1LRE,1OP1,1OV2,2FYL


Conserved Protein Domain Family
RAP_D1

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cd14806: RAP_D1 
Click on image for an interactive view with Cn3D
Receptor-associated protein (RAP), Domain 1
This subfamily is the N-terminal domain (D1) of receptor-associated protein, RAP, an antagonist and a specialized chaperone in the endoplasmic reticulum that binds tightly to members of the low-density lipoprotein (LDL) receptor family and prevents them from associating with other ligands. D1 as well as domain 2 (D2) are essential for blocking low-density lipoprotein receptor-related protein (LRP) from binding of certain ligands, such as activated forms of alpha2-macroglobulin; D1 and D2 each bind LRP weakly but the tandem D1D2 binds much more tightly, suggesting the avidity effects arising from amino acid residues contributed from each domain. The double module of complement type repeats, CR56, of LRP binds many ligands including alpha2-macroglobulin, which promotes the catabolism of the Abeta-peptide implicated in Alzheimer's disease.
Statistics
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PSSM-Id: 269813
Aligned: 17 rows
Threshold Bit Score: 88.9737
Created: 17-Jul-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:3-helical coiled coil [structural motif]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ##########                                                           
2P01_A        20 FRMEKLNQLWEKAQRlhl--ppVRLAELHADLKIQERDELAWKKLKldglDEDGEKEARLIRNLNVILAKYGL 90  human
AAH49517      24 FRIAKLNQVWEKAIRmql--apVRLSELHSDLKIQEKDELQWKKLKaegmDEDGEREAKLRRNFNIILAKYGM 94  zebrafish
Q7QAV5        54 FRMAKLNLVWTKAQHrl---tePKLKSLYTELKLHDKEELTYKQLKe--kDKDGLKEAELRNKLVSIMSTYGL 121 Anopheles gambiae str....
O57378        43 FRVVRLNQVWEKAQRlql--saVKLAELHSDLKIQEKDELSWKKLKaeglGEDGEKEAKLRRNINVIMTKYGM 113 chicken
Q7SYR7        55 FRIMRLNQIWEKAQRlql--ssVQLTELHSDLKIQEKDELNWKKLKvdglDDDGEKEAKLRRSLNVILTKYGL 125 African clawed frog
XP_002127747  33 FRTAKVNQLWDKAIKlkl--ssVILSDLYVDLKHHDRQLMDAKVSQi---DAENQIWEVLKEDFTRIMVRYGL 100 vase tunicate
EEC15467      47 FRMHKLNALWEKAQKrl---seAKLKGLYSELKVQDKDELAWKKLRgagqDKEGLKEAELRHRLKEIVERFGL 116 black-legged tick
ADD37989      39 FRMNKLNLLWDKVLRskhllqeSKLKAFYNSLKLQEKEEFALKKIKgegkDKDGSFEAQVRKKFKNLLEEFSL 111 salmon louse
EFX84118      47 FRLAKINLIWAKAQKrl---teFKLKSLYSELKVQDKEELQLKRLKadnlDKDGLKEAEIRKKFGNVIERYGL 116 common water flea
XP_005886527  34 GAVQRCQASPVPPQLql---spVDLSELHADLKIQERDEFAWKKLKaeglDEDGEKEAKLIRNLNGTFPPPHP 103 Brandt's bat

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