Conserved Protein Domain Family
RAP

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smart00952: RAP 
This domain is found in various eukaryotic species, particularly in apicomplexans.
In Plasmodium falciparum, the domain is found in proteins that are important in various parasite-host cell interactions. It is thought to be an RNA-binding domain.
Statistics
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PSSM-Id: 214932
Aligned: 61 rows
Threshold Bit Score: 33.7457
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_765876    460 IEIDGPYhyNILLDeE-DCVHGDIikygninlRLNGKtiyrnnILAKLGYKLISIPWFVIHQ--Y---NNDNVYNYIKNV 533 Theileria parva...
NP_991192    768 LDFLDSR--SFCRN-T-RHMKGEA--------TMKKR------HLEILGYHVLQIPHYEWNS--MelsTDDAWKEYLKEK 827 zebrafish
XP_001654178 505 LLVHDYH--DMCQGpN-PSLNGVH--------ALACR------LLEKSGYSVLSIPYSEFNT--Sd--KLLKRVEYLQRM 563 yellow fever mo...
XP_320980    508 LLVHDYH--DMCQGpH-VALNGIQ--------ALNMR------LLEQEGYTVLSIPYNEFST--Sd--KLLKRVEYLQKK 566 Anopheles gambi...
XP_002078315 834 ILLLKLD--SFCEN-DlTALRGPE--------SLKMR------HLEMMGYKVMQINEHDWNSkyMa--SSTAKANYLKCL 894 Drosophila simu...
XP_001688307 574 IVVGSWN--CYVRD-E-RRRTGGY--------AMKLE------QLRRLHYDTLEIPWYEWPV--Y---SRDDMRRYLEAK 630 Anopheles gambi...
XP_001656894 585 VVAGGWN--CYVRN-Q-NRVTGGF--------AMKLK------QLGLVGFETVVIPWYEW-P--Ld--SLEAKEAYLFNR 641 yellow fever mo...
XP_001347349 807 VLYNPYk--TFYND-T-FFIKSNv--------LVKIN------FLLIKGYNIIAIPFYTWRN--MsyeEKEKHVELLRKQ 866 Plasmodium falc...
XP_001347824 530 WLCLSYh--HYYVR-T-IDLTVEk--------LLQIN------LIKAMNYKISKIHYYQFSR--Mk--AKKTRFEYIRMC 587 Plasmodium falc...
XP_765889     86 WLCNSYh--RFYAT-T-FNMTANs--------KLLTK------LIKAFGYKVSIINYYQWGR--Mk--CKRTRFTFLRMA 143 Theileria parva...
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