Conserved Protein Domain Family
SH3_Abi1

?
cd11971: SH3_Abi1 
Src homology 3 domain of Abl Interactor 1
Abi1, also called e3B1, is a central regulator of actin cytoskeletal reorganization through interactions with many protein complexes. It is part of WAVE, a nucleation-promoting factor complex, that links Rac 1 activation to actin polymerization causing lamellipodia protrusion at the plasma membrane. Abi1 interact with formins to promote protrusions at the leading edge of motile cells. It also is a target of alpha4 integrin, regulating membrane protrusions at sites of integrin engagement. Abi proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
?
PSSM-Id: 212904
Aligned: 4 rows
Threshold Bit Score: 128.985
Created: 7-Nov-2011
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
peptide ligand
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  #   #                 ##            # ##         
7579917      450 KVVAIYDYTKDKDDELSFMEGAIIYVIKKNDDGWYEGVCNRVTGLFPGNYVESIMHYTD 508 human
NP_957032    216 KVVAIYDYTKDKDDELSFIEGAIIYIIKKNDDGWFEGVCNGVTGLFPGNYVESIMHYAD 274 zebrafish
NP_001087758 445 KVVAIYDYSKDKADELSFMEGSIIYVIKKNDDGWYEGVSNGVTGLFPGNYVEAVMHYAD 503 African clawed frog
CAP09340     444 KVVAIYDYSKDKDDELSFMEGAIIYIIKKNDDGWFEGVCNGVTGLFPGNYVESIMHYAD 502 zebrafish

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap