Conserved Protein Domain Family
Ig2_Necl-2

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cd05883: Ig2_Necl-2 (this model, PSSM-Id:143291 is obsolete and has been replaced by 409466)
Second immunoglobulin (Ig)-like domain of nectin-like molecule 2 (also known as cell adhesion molecule 1 (CADM1))
Ig2_Necl-2: second immunoglobulin (Ig)-like domain of nectin-like molecule 2 (also known as cell adhesion molecule 1 (CADM1)). Nectin-like molecules (Necls) have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. Necl-2 has Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is expressed in a wide variety of tissues, and is a putative tumour suppressor gene, which is downregulated in aggressive neuroblastoma. Ig domains are likely to participate in ligand binding and recognition.
Statistics
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PSSM-Id: 143291
Aligned: 4 rows
Threshold Bit Score: 155.501
Created: 11-Jan-2008
Updated: 18-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001091987 161 EIEVNCTAMasKPATTIRWFKGNTELKgkse--veewSDMYTVTSQLMLKvhkeDDGVPVICQVEHPAVTgnLQTQRYLE 238 human
XP_417901    147 EIELNCTAMasRPATTIRWFKGNKELTgkse--veqwSDMYTVTSQLLLKvgreDDGVPVICLVDHPAVKd-LQTQRYLE 223 chicken
NP_001090152 145 EVEMNCTALasKPAATIRWFKGNKELTavktdvepmeERMFRVRSQLMLTakreDDGIPIVCLVDHPAVKd-LQTQQYLE 223 African clawed ...
CAG08910     119 ETELTCTAIgsKPAASIRWMKGEEELTgeatv-eetyDRMFTVTSRVRFSvtkdDDGVPVDCIIDHPAAKd-LLAQRHLE 196 Tetraodon nigro...
NP_001091987 239 VQYK 242 human
XP_417901    224 VMYK 227 chicken
NP_001090152 224 VQYA 227 African clawed frog
CAG08910     197 VLCE 200 Tetraodon nigroviridis
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