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Report for CCDS34885.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34885.1 Public Homo sapiens 8 ZMAT4 24 110 108 CCDS HistoryNCBI Gene:79698Re-query CCDS DB by CCDS ID:34885.1Re-query CCDS DB by GeneID:79698See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34885.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297737.11 ENSP00000297737.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297737.11Link to Ensembl Protein Viewer:ENSP00000297737.6Re-query CCDS DB by Nucleotide ID:ENST00000297737Re-query CCDS DB by Protein ID:ENSP00000297737
Original member Current member NCBI NM_024645.3 NP_078921.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024645.3Link to Protein Sequence:NP_078921.1Re-query CCDS DB by Nucleotide ID:NM_024645Re-query CCDS DB by Protein ID:NP_078921Link to BLAST:NP_078921.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078921.1 229 Q9H898-1 229 100% 0 0

Chromosomal Locations for CCDS 34885.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 40532223 40532238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 40581165 40581261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 40674704 40674931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 40697245 40697401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 40767641 40767730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 40825575 40825676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGAAGTCCTCCGATATTGATCAGGATTTATTCACAGACAGTTACTGCAAGGTGTGCAGTGCACAGCTGA
TCTCCGAATCGCAGCGTGTGGCCCACTACGAGAGTCGAAAACATGCAAGCAAAGTCCGACTGTATTACAT
GCTTCACCCCAGGGATGGAGGGTGTCCTGCCAAGAGGCTCCGGTCAGAAAATGGAAGTGATGCCGACATG
GTGGATAAGAACAAGTGCTGCACACTCTGCAACATGTCATTCACTTCAGCGGTGGTGGCCGATTCCCATT
ATCAAGGCAAAATCCACGCCAAGAGGTTAAAACTCTTGCTAGGAGAGAAGACCCCATTAAAGACCACAGC
AACACCCCTGAGCCCACTTAAGCCCCCACGGATGGACACTGCTCCGGTGGTCGCATCTCCCTATCAAAGA
AGAGATTCAGACAGATACTGTGGGCTCTGTGCAGCCTGGTTTAATAACCCTCTGATGGCCCAGCAACATT
ATGATGGCAAGAAACACAAAAAGAATGCGGCAAGAGTTGCTTTGTTAGAACAACTGGGGACAACCCTGGA
TATGGGGGAACTGAGAGGTCTGAGGCGCAATTACAGATGTACCATCTGCAGTGTCTCCCTAAACTCAATA
GAACAGTATCATGCCCATCTGAAAGGATCTAAACACCAGACCAACCTGAAGAATAAGTAG

Translation (229 aa):
MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADM
VDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLKPPRMDTAPVVASPYQR
RDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDMGELRGLRRNYRCTICSVSLNSI
EQYHAHLKGSKHQTNLKNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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