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Report for CCDS86670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86670.1 Public Homo sapiens 18 POLI 24 110 108 CCDS HistoryNCBI Gene:11201Re-query CCDS DB by CCDS ID:86670.1Re-query CCDS DB by GeneID:11201See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86670.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000579434.5 ENSP00000462681.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000579434.5Link to Ensembl Protein Viewer:ENSP00000462681.1Re-query CCDS DB by Nucleotide ID:ENST00000579434Re-query CCDS DB by Protein ID:ENSP00000462681
Original member Current member NCBI NM_001351614.2 NP_001338543.1 Accepted alive Link to Nucleotide Sequence:NM_001351614.2Link to Protein Sequence:NP_001338543.1Re-query CCDS DB by Nucleotide ID:NM_001351614Re-query CCDS DB by Protein ID:NP_001338543Link to BLAST:NP_001338543.1
Original member Current member NCBI NM_001351615.2 NP_001338544.1 Accepted alive Link to Nucleotide Sequence:NM_001351615.2Link to Protein Sequence:NP_001338544.1Re-query CCDS DB by Nucleotide ID:NM_001351615Re-query CCDS DB by Protein ID:NP_001338544Link to BLAST:NP_001338544.1

Chromosomal Locations for CCDS 86670.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 54273994 54274090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54277703 54277855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54280667 54280903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54282837 54283015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54283922 54284013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54287281 54287411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54291833 54292038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54293649 54294467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1914 nt):
ATGAATGTCAGAGATGCAAAAGAAAAGTGTCCACAGTTGGTATTAGTTAATGGAGAAGACCTGACCCGCT
ACAGAGAAATGTCTTATAAGGTTACAGAATTACTGGAAGAATTTAGTCCAGTTGTTGAGAGACTTGGATT
TGATGAAAATTTTGTGGATCTAACAGAAATGGTTGAGAAGAGACTACAGCAGCTGCAAAGTGATGAACTT
TCTGCGGTGACTGTGTCGGGTCATGTATACAATAATCAGTCTATAAACCTGCTTGACGTCTTGCACATCA
GACTACTTGTTGGATCTCAGATTGCAGCAGAGATGCGGGAAGCCATGTATAATCAGTTGGGGCTCACTGG
CTGTGCTGGAGTGGCTTCTAATAAACTGTTGGCAAAATTAGTTTCTGGTGTCTTTAAACCAAATCAACAA
ACAGTCTTATTACCTGAAAGTTGTCAACATCTTATTCATAGTTTGAATCACATAAAGGAAATACCTGGTA
TTGGCTATAAAACTGCCAAATGTCTTGAAGCACTGGGTATCAATAGTGTGCGTGATCTCCAAACCTTTTC
ACCCAAAATTTTAGAAAAAGAATTAGGAATTTCAGTTGCTCAGCGTATCCAAAAGCTCAGTTTTGGAGAG
GATAACTCCCCTGTGATACTCTCAGGACCACCTCAGTCCTTTAGTGAAGAAGATTCATTTAAAAAATGTT
CATCTGAAGTTGAAGCTAAAAATAAGATTGAAGAACTACTTGCTAGTCTTTTAAACAGAGTATGCCAAGA
TGGAAGGAAGCCTCATACAGTGAGATTAATAATCCGTCGGTATTCCTCTGAGAAGCACTATGGTCGTGAG
AGTCGTCAGTGCCCTATTCCTTCACATGTAATTCAGAAATTAGGGACAGGAAATTATGATGTGATGACCC
CAATGGTTGATATACTTATGAAACTTTTTCGAAATATGGTGAATGTGAAGATGCCATTTCACCTTACCCT
TCTAAGTGTGTGCTTCTGCAACCTTAAAGCACTAAATACTGCTAAGAAAGGGCTTATTGATTATTATTTA
ATGCCATCATTATCAACTACTTCACGCTCTGGCAAGCACAGTTTTAAAATGAAAGACACTCATATGGAAG
ATTTTCCCAAAGACAAAGAAACAAACCGGGATTTCCTACCAAGTGGAAGAATTGAAAGTACAAGAACTAG
GGAGTCTCCACTAGATACCACAAATTTTTCTAAAGAAAAAGACATTAATGAATTCCCACTCTGTTCACTT
CCTGAAGGTGTTGACCAAGAAGTCTTCAAGCAGCTTCCAGTAGATATTCAAGAAGAAATCCTTTCTGGAA
AATCTAGGGAAAAATTTCAAGGGAAAGGAAGTGTGAGTTGTCCATTACATGCCTCTAGAGGAGTATTATC
TTTCTTTTCTAAAAAACAAATGCAAGATATTCCCATAAATCCTAGAGATCATTTATCCAGTAGCAAACAG
GTATCCTCTGTATCTCCTTGTGAACCGGGAACATCAGGCTTTAATAGCAGTAGTTCTTCTTACATGTCTA
GCCAAAAGGATTATTCATATTATTTAGATAATAGATTAAAAGATGAACGAATAAGTCAAGGACCTAAAGA
ACCTCAAGGATTCCACTTTACAAATTCAAACCCTGCTGTGTCTGCTTTTCATTCATTTCCAAACTTGCAG
AGTGAGCAACTTTTCTCCAGAAACCACACTACAGATAGCCATAAGCAAACAGTAGCAACAGACTCTCATG
AAGGACTTACAGAAAATAGAGAGCCAGATTCTGTTGATGAGAAAATTACTTTCCCTTCTGACATTGATCC
TCAAGTTTTCTATGAACTACCAGAAGCAGTACAAAAGGAACTGCTGGCAGAGTGGAAGAGAGCAGGATCA
GATTTCCACATTGGACATAAATAA

Translation (637 aa):
MNVRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDEL
SAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQ
TVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGE
DNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRE
SRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLKALNTAKKGLIDYYL
MPSLSTTSRSGKHSFKMKDTHMEDFPKDKETNRDFLPSGRIESTRTRESPLDTTNFSKEKDINEFPLCSL
PEGVDQEVFKQLPVDIQEEILSGKSREKFQGKGSVSCPLHASRGVLSFFSKKQMQDIPINPRDHLSSSKQ
VSSVSPCEPGTSGFNSSSSSYMSSQKDYSYYLDNRLKDERISQGPKEPQGFHFTNSNPAVSAFHSFPNLQ
SEQLFSRNHTTDSHKQTVATDSHEGLTENREPDSVDEKITFPSDIDPQVFYELPEAVQKELLAEWKRAGS
DFHIGHK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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