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Report for CCDS92305.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92305.1 Public Homo sapiens 17 KRTAP4-1 24 110 108 CCDS HistoryNCBI Gene:85285Re-query CCDS DB by CCDS ID:92305.1Re-query CCDS DB by GeneID:85285See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92305.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398472.2 ENSP00000381489.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398472.2Link to Ensembl Protein Viewer:ENSP00000381489.1Re-query CCDS DB by Nucleotide ID:ENST00000398472Re-query CCDS DB by Protein ID:ENSP00000381489
Original member Current member NCBI NM_001386841.1 NP_001373770.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386841.1Link to Protein Sequence:NP_001373770.1Re-query CCDS DB by Nucleotide ID:NM_001386841Re-query CCDS DB by Protein ID:NP_001373770Link to BLAST:NP_001373770.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373770.1 146 Q9BYQ7 146 100% 0 0

Chromosomal Locations for CCDS 92305.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41184414 41184854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGGTTAACTCTTGTTGTGGCTCTGTCTGCTCTGACCAGGGCTGTGATCAAGGCCTCTGCCAAGAGACCT
GCTGCCGCCCCAGCTGCTGCCAGACCACCTGTTGCTGCCCCAGCTGTGTTGTATCCAGCTGCTGCCGCCC
ATCCTGCTCTCAGACTACCTGCTGCCAGACCACTTGCTGTCGCCCCAGCTGCTGCCACCCAGTCTGTTGT
CAGACCACCTGCCGCCCCAGCTGTGGTGTGTCCAGCTGCTGCCGCCCACTCTGCTGTCAGACCACCTGCC
ACCCCAGCTGTGGTATGTCCAGCTGCTGCCGTCCACTCTGTTGTCAGACCACCTGCCGCCCCAGCTGTGG
TGTGTCCAGCTGCTGCCGTCCACTCTGCTGTCAGACCACCTGCTGCCGTGCAACTTGCTGCCGCCCCAGC
TGCTGTGGATCCTCTTGTTGA

Translation (146 aa):
MVNSCCGSVCSDQGCDQGLCQETCCRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQTTCCRPSCCHPVCC
QTTCRPSCGVSSCCRPLCCQTTCHPSCGMSSCCRPLCCQTTCRPSCGVSSCCRPLCCQTTCCRATCCRPS
CCGSSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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