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Report for CCDS74321.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74321.1 Public Homo sapiens 19 ZNF43 24 110 108 CCDS HistoryNCBI Gene:7594Re-query CCDS DB by CCDS ID:74321.1Re-query CCDS DB by GeneID:7594See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74321.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357491.10 ENSP00000350085.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357491.10Link to Ensembl Protein Viewer:ENSP00000350085.7Re-query CCDS DB by Nucleotide ID:ENST00000357491Re-query CCDS DB by Protein ID:ENSP00000350085
Original member Current member NCBI NM_001256653.2 NP_001243582.1 Accepted alive Link to Nucleotide Sequence:NM_001256653.2Link to Protein Sequence:NP_001243582.1Re-query CCDS DB by Nucleotide ID:NM_001256653Re-query CCDS DB by Protein ID:NP_001243582Link to BLAST:NP_001243582.1

Chromosomal Locations for CCDS 74321.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21807607 21809807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21817888 21817986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21819095 21819221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21851905 21851934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2457 nt):
ATGCCCGGACATCCTGGAAGCTGGGAAATGGGACCATTGACATTTATGGATGTGGCCATAGAATTCTGTC
TGGAGGAGTGGCAATGCCTGGACATTGCACAGCAGAATTTATATAGGAATGTGATGTTAGAGAACTACAG
AAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCCAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAG
CCTTGGGAGCCTATGAGGAGACATGAAATGGTAGCCAAACCCCCAGTTATGTGTTCTCATTTTACCCAAG
ACTTTTGGCCAGAGCAGCATATAAAAGATCCTTTCCAAAAAGCGACACTGAGAAGATATAAAAACTGTGA
ACATAAAAATGTACATTTAAAAAAAGACCATAAAAGTGTGGATGAGTGTAAGGTGCACAGAGGAGGTTAT
AATGGATTTAACCAATGTTTGCCAGCTACCCAGAGCAAAATATTTCTATTTGATAAATGTGTGAAAGCCT
TTCATAAATTTTCAAATTCAAACAGACATAAGATAAGCCATACTGAAAAAAAACTTTTCAAATGCAAAGA
ATGTGGCAAATCATTTTGCATGCTTCCACATCTAGCTCAACATAAAATAATTCATACCAGAGTGAATTTC
TGCAAATGTGAAAAATGTGGAAAAGCTTTTAACTGCCCTTCAATCATCACTAAACATAAGAGAATTAATA
CTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGTCTTTAATTGGTCCTCACGCCTTACTACACA
TAAAAAAAATTATACTAGATACAAACTCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACAAGTCCTCA
ATCCTTACTACCCATAAGATAATTCGCACTGGAGAGAAATTCTACAAATGTAAAGAATGTGCCAAAGCTT
TTAACCAATCCTCAAACCTTACTGAACATAAGAAAATTCATCCTGGAGAGAAACCTTACAAATGTGAAGA
ATGTGGCAAAGCCTTTAACTGGCCCTCAACTCTTACTAAACATAAGAGAATTCATACTGGAGAGAAACCC
TACACATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAACCTTACTACACATAAGAGAATCCATA
CTGCAGAGAAATTCTATAAATGTACAGAATGTGGTGAAGCTTTTAGCCGGTCCTCAAACCTTACTAAACA
TAAGAAAATTCATACTGAAAAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAGTGGTCCTCA
AAGCTTACTGAACATAAGTTAACTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCT
TTAACTGGCCCTCAACCCTTACTAAACATAACAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGT
ATGTGGCAAAGCCTTTAACCAGTTCTCAAACCTTACTACACATAAGAGAATTCATACTGCAGAAAAACCG
TACAAATGTGAAGAATGTGGCAAAGCTTTTAGCCGGTCCTCAAACCTTACTAAACATAAGAAAATTCACA
TTGAAAAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAGTGGTCCTCAAAGCTTACTGAACA
TAAGATAACTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCATTTCTCA
ATCCTTACCAAACATAAGAGGATTCATACTGGAGAGAAACCCTACAAGTGTGAAGAATGTGGCAAAGCTT
TTACCCAATCCTCAAACCTTACTACACATAAGAAAATTCATACTGGAGAGAAATTCTACAAATGTGAAGA
ATGTGGCAAAGCTTTTACCCAATCTTCAAACCTTACTACACATAAAAAAATTCATACTGGAGGAAAACCC
TACAAATGTGAAGAATGTGGCAAAGCTTTTAACCAGTTCTCAACTCTTACTAAACATAAGATAATTCACA
CTGAGGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAAGTGGTCCTCAACCCTTACTAAACA
TAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAACTGTCCTCA
ACCCTTTCTACACATAAGATTATTCATACTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAAGCTT
TTAACCGATCCTCAAACCTTATTGAACATAAGAAAATTCATACTGGAGAGCAACCCTACAAATGTGAAGA
ATGTGGCAAAGCATTTAACTATTCCTCACACCTTAATACACATAAGAGAATTCATACTAAAGAGCAACCC
TACAAATGTAAAGAATGTGGCAAAGCTTTCAACCAATATTCAAACCTTACTACACATAACAAAATTCATA
CTGGAGAGAAACTCTACAAACCTGAAGATGTGACAGTGATTTTGACAACACCTCAAACTTTTTCAAACAT
AAAATAA

Translation (818 aa):
MPGHPGSWEMGPLTFMDVAIEFCLEEWQCLDIAQQNLYRNVMLENYRNLVFLGIAVSKPDLITCLEQEKE
PWEPMRRHEMVAKPPVMCSHFTQDFWPEQHIKDPFQKATLRRYKNCEHKNVHLKKDHKSVDECKVHRGGY
NGFNQCLPATQSKIFLFDKCVKAFHKFSNSNRHKISHTEKKLFKCKECGKSFCMLPHLAQHKIIHTRVNF
CKCEKCGKAFNCPSIITKHKRINTGEKPYTCEECGKVFNWSSRLTTHKKNYTRYKLYKCEECGKAFNKSS
ILTTHKIIRTGEKFYKCKECAKAFNQSSNLTEHKKIHPGEKPYKCEECGKAFNWPSTLTKHKRIHTGEKP
YTCEECGKAFNQFSNLTTHKRIHTAEKFYKCTECGEAFSRSSNLTKHKKIHTEKKPYKCEECGKAFKWSS
KLTEHKLTHTGEKPYKCEECGKAFNWPSTLTKHNRIHTGEKPYKCEVCGKAFNQFSNLTTHKRIHTAEKP
YKCEECGKAFSRSSNLTKHKKIHIEKKPYKCEECGKAFKWSSKLTEHKITHTGEKPYKCEECGKAFNHFS
ILTKHKRIHTGEKPYKCEECGKAFTQSSNLTTHKKIHTGEKFYKCEECGKAFTQSSNLTTHKKIHTGGKP
YKCEECGKAFNQFSTLTKHKIIHTEEKPYKCEECGKAFKWSSTLTKHKIIHTGEKPYKCEECGKAFKLSS
TLSTHKIIHTGEKPYKCEKCGKAFNRSSNLIEHKKIHTGEQPYKCEECGKAFNYSSHLNTHKRIHTKEQP
YKCKECGKAFNQYSNLTTHNKIHTGEKLYKPEDVTVILTTPQTFSNIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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