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Report for CCDS6599.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6599.1 Public Homo sapiens 9 CCIN 24 110 108 CCDS HistoryNCBI Gene:881Re-query CCDS DB by CCDS ID:6599.1Re-query CCDS DB by GeneID:881See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6599.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335119.4 ENSP00000334996.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335119.4Link to Ensembl Protein Viewer:ENSP00000334996.2Re-query CCDS DB by Nucleotide ID:ENST00000335119Re-query CCDS DB by Protein ID:ENSP00000334996
Original member Current member NCBI NM_005893.3 NP_005884.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005893.3Link to Protein Sequence:NP_005884.2Re-query CCDS DB by Nucleotide ID:NM_005893Re-query CCDS DB by Protein ID:NP_005884Link to BLAST:NP_005884.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005884.2 588 Q13939 588 100% 0 0

Chromosomal Locations for CCDS 6599.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 36169503 36171269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1767 nt):
ATGAAATTGGAATTCACGGAGAAAAACTACAATAGCTTCGTGCTGCAGAACCTGAACAGACAGAGGAAAC
GCAAAGAGTACTGGGACATGGCCCTGAGTGTGGACAACCACGTCTTCTTTGCACATCGCAATGTGCTGGC
TGCTGTCTCCCCACTGGTGAGGAGCCTCATCTCCAGCAATGACATGAAGACCGCTGATGAGCTTTTCATC
ACCATTGACACCAGTTACCTGAGCCCGGTCACAGTGGACCAGCTTCTGGACTACTTCTATAGCGGCAAGG
TGGTGATCTCCGAGCAAAATGTGGAGGAGCTGCTTCGTGGGGCTCAGTATTTCAACACACCACGCCTTCG
AGTTCACTGTAACGACTTCCTTATTAAGTCCATCTGCCGTGCCAACTGCTTGCGCTACCTCTTCTTGGCT
GAGCTGTTTGAGCTCAAAGAGGTATCAGACGTAGCTTACTCTGGCATTCGGGACAACTTCCACTACTGGG
CCAGTCCTGAGGGCTCCATGCACTTCATGCGCTGTCCACCTGTTATCTTTGGCCGCCTGCTCCGTGATGA
AAACCTTCACGTGCTCAATGAAGACCAGGCGCTCAGCGCACTCATCAATTGGGTGTACTTCCGGAAGGAG
GATCGGGAGAAGTATTTCAAGAAGTTCTTCAATTACATCAATCTCAATGCTGTCTCCAATAAGACGCTGG
TGTTTGCCAGCAACAAGCTGGTGGGCATGGAGAACACCTCATCCCATACAACCCTGATTGAGAGTGTCCT
GATGGACCGCAAGCAGGAGCGGCCATGCAGCCTGCTGGTCTACCAGCGGAAAGGGGCCCTGCTTGATTCC
GTGGTCATCCTCGGTGGCCAGAAGGCCCACGGCCAGTTCAATGATGGAGTGTTTGCTTATATCATCCAGG
AGAACCTGTGGATGAAGCTCTCAGACATGCCCTATCGGGCAGCAGCACTTAGTGCCACCTCTGCTGGTCG
CTACATCTACATCTCTGGTGGCACCACTGAGCAGATTTCAGGGCTGAAGACAGCCTGGCGGTATGACATG
GATGACAACTCCTGGACCAAGTTGCCTGACCTGCCCATCGGGCTTGTCTTCCACACCATGGTGACCTGTG
GGGGGACAGTGTACTCAGTGGGCGGGAGCATTGCCCCAAGGCGGTATGTCTCCAACATCTATCGCTATGA
TGAGCGGAAGGAAGTCTGGTGCCTGGCAGGAAAGATGAGCATCCCCATGGATGGCACCGCCGTGATCACT
AAAGGAGACAGGCATCTGTACATTGTCACTGGACGGTGCTTGGTGAAAGGTTATATCTCCCGGGTCGGGG
TAGTGGACTGCTTTGACACCAGCACTGGGGACGTGGTCCAGTGTATCACCTTCCCCATTGAGTTCAACCA
TCGGCCCCTGCTCTCTTTCCAACAGGACAACATCCTCTGCGTGCACAGCCACCGGCAGAGTGTGGAAATC
AATCTGCAGAAGGTGAAGGCAAGCAAGACGACCACCTCAGTGCCTGTCTTGCCCAACAGCTGCCCCTTGG
ATGTGTCCCATGCTATATGCTCCATTGGAGACAGCAAGGTGTTTGTATGTGGGGGTGTCACCACTGCCAG
CGATGTCCAGACAAAGGACTACACCATCAATCCAAATGCCTTCTTGCTGGACCAAAAGACAGGCAAGTGG
AAGACCCTGGCTCCTCCACCAGAGGCACTGGACTGTCCTGCCTGCTGTCTAGCCAAGCTACCTTGCAAGA
TTCTTCAAAGGATTTAA

Translation (588 aa):
MKLEFTEKNYNSFVLQNLNRQRKRKEYWDMALSVDNHVFFAHRNVLAAVSPLVRSLISSNDMKTADELFI
TIDTSYLSPVTVDQLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRVHCNDFLIKSICRANCLRYLFLA
ELFELKEVSDVAYSGIRDNFHYWASPEGSMHFMRCPPVIFGRLLRDENLHVLNEDQALSALINWVYFRKE
DREKYFKKFFNYINLNAVSNKTLVFASNKLVGMENTSSHTTLIESVLMDRKQERPCSLLVYQRKGALLDS
VVILGGQKAHGQFNDGVFAYIIQENLWMKLSDMPYRAAALSATSAGRYIYISGGTTEQISGLKTAWRYDM
DDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIYRYDERKEVWCLAGKMSIPMDGTAVIT
KGDRHLYIVTGRCLVKGYISRVGVVDCFDTSTGDVVQCITFPIEFNHRPLLSFQQDNILCVHSHRQSVEI
NLQKVKASKTTTSVPVLPNSCPLDVSHAICSIGDSKVFVCGGVTTASDVQTKDYTINPNAFLLDQKTGKW
KTLAPPPEALDCPACCLAKLPCKILQRI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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