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Report for CCDS14628.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14628.1 Public Homo sapiens X ARHGAP36 24 110 108 CCDS HistoryNCBI Gene:158763Re-query CCDS DB by CCDS ID:14628.1Re-query CCDS DB by GeneID:158763See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14628.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000276211.10 ENSP00000276211.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000276211.10Link to Ensembl Protein Viewer:ENSP00000276211.5Re-query CCDS DB by Nucleotide ID:ENST00000276211Re-query CCDS DB by Protein ID:ENSP00000276211
Original member Current member NCBI NM_144967.4 NP_659404.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144967.4Link to Protein Sequence:NP_659404.2Re-query CCDS DB by Nucleotide ID:NM_144967Re-query CCDS DB by Protein ID:NP_659404Link to BLAST:NP_659404.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659404.2 547 Q6ZRI8-1 547 100% 0 0

Chromosomal Locations for CCDS 14628.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 131081666 131081918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131083165 131083230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131083734 131083969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131084215 131084407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131084626 131084681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131084914 131085064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131085588 131085736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131085913 131086089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131086329 131086426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131086559 131086665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131088628 131088785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1644 nt):
ATGGGTGGCTGCATTCCTTTTCTGAAGGCAGCAAGGGCACTGTGCCCCAGAATCATGCCCCCTTTGCTGT
TGTTGTCCGCCTTCATTTTTTTAGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGAC
GAAGATGGTATCGATACACAGCCTCTCTGAGCTGGAGCGTCTGAAGCTGCAAGAGACTGCTTACCACGAA
CTCGTGGCCAGACATTTCCTCTCCGAATTCAAACCTGACAGAGCTCTGCCTATTGACCGTCCGAACACCT
TGGATAAGTGGTTTCTGATTTTGAGAGGACAGCAGAGGGCTGTATCACACAAGACATTTGGCATTAGCCT
GGAAGAGGTCCTGGTGAACGAGTTTACCCGCCGCAAGCATCTTGAACTGACAGCCACGATGCAGGTTGAA
GAAGCCACCGGTCAGGCTGCGGGCCGTCGTCGGGGAAACGTGGTGCGAAGGGTGTTTGGCCGCATCCGGC
GCTTTTTCAGTCGCAGGCGGAATGAGCCCACCTTGCCCCGGGAGTTCACTCGCCGTGGGCGTCGAGGTGC
AGTGTCTGTGGATAGTCTGGCTGAGCTGGAAGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTCAAAA
ATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAAC
AAATCCCCCAGGTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACATGGCTTAAGCGCAGTGGGGATTTT
TACCCTTGAATACTCCGTGCAGCGAGTGCGTCAGCTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTG
CTGGATGACAATCAGAATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTGACATGAAGGATT
CTCTGCTGCCAGATGATCTGTACATGTCATTCCTCCTGACAGCAACTTTAAAGCCCCAGGATCAGCTTTC
TGCCCTGCAGTTGCTGGTCTACCTGATGCCACCCTGCCACAGTGATACCCTGGAGCGTCTGCTGAAGGCC
CTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCATTGATGGACAGTTGGTCCCAGGCAACCGTA
TGACTTCCACTAACTTGGCCTTGGTGTTTGGATCTGCTCTCCTGAAAAAAGGAAAGTTTGGCAAGAGAGA
GTCCAGGAAAACAAAGCTGGGGATTGATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCATGATTGAT
AACTGGGATGTCCTCTTCCAGGTGCCTCCCCATATTCAGAGGCAGGTTGCTAAGCGCGTGTGGAAGTCCA
GCCCGGAAGCACTTGATTTTATCAGACGCAGGAACTTGAGGAAGATCCAGAGTGCACGCATAAAGATGGA
AGAGGATGCACTACTTTCTGATCCAGTGGAAACCTCTGCTGAAGCCCGGGCTGCTGTCCTTGCTCAAAGC
AAGCCTTCTGATGAAGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATGACGATG
AGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGA
GGCCAAAACTGGCGTCAGCTACTTCTTTCCTTAG

Translation (547 aa):
MGGCIPFLKAARALCPRIMPPLLLLSAFIFLVSVLGGAPGHNPDRRTKMVSIHSLSELERLKLQETAYHE
LVARHFLSEFKPDRALPIDRPNTLDKWFLILRGQQRAVSHKTFGISLEEVLVNEFTRRKHLELTATMQVE
EATGQAAGRRRGNVVRRVFGRIRRFFSRRRNEPTLPREFTRRGRRGAVSVDSLAELEDGALLLQTLQLSK
ISFPIGQRLLGSKRKMSLNPIAKQIPQVVEACCQFIEKHGLSAVGIFTLEYSVQRVRQLREEFDQGLDVV
LDDNQNVHDVAALLKEFFRDMKDSLLPDDLYMSFLLTATLKPQDQLSALQLLVYLMPPCHSDTLERLLKA
LHKITENCEDSIGIDGQLVPGNRMTSTNLALVFGSALLKKGKFGKRESRKTKLGIDHYVASVNVVRAMID
NWDVLFQVPPHIQRQVAKRVWKSSPEALDFIRRRNLRKIQSARIKMEEDALLSDPVETSAEARAAVLAQS
KPSDEGSSEEPAVPSGTARSHDDEEGAGNPPIPEQDRPLLRVPREKEAKTGVSYFFP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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