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Report for CCDS6610.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6610.1 Public Homo sapiens 9 ZBTB5 24 110 108 CCDS HistoryNCBI Gene:9925Re-query CCDS DB by CCDS ID:6610.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6610.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307750.5 ENSP00000307604.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307750.5Link to Ensembl Protein Viewer:ENSP00000307604.4Re-query CCDS DB by Nucleotide ID:ENST00000307750Re-query CCDS DB by Protein ID:ENSP00000307604
Original member Current member NCBI NM_014872.3 NP_055687.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014872.3Link to Protein Sequence:NP_055687.1Re-query CCDS DB by Nucleotide ID:NM_014872Re-query CCDS DB by Protein ID:NP_055687Link to BLAST:NP_055687.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055687.1 677 O15062 677 100% 0 0

Chromosomal Locations for CCDS 6610.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 37440518 37442551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2034 nt):
ATGGATTTTCCTGGTCACTTTGAACAAATCTTCCAGCAGCTGAACTACCAGAGACTTCATGGCCAGCTCT
GTGATTGTGTCATTGTAGTGGGGAATAGACACTTTAAAGCCCACCGCTCCGTGCTGGCAGCATGCAGCAC
GCATTTCCGAGCCCTGTTCTCAGTGGCAGAAGGAGATCAGACCATGAACATGATCCAGCTGGATAGCGAG
GTGGTGACAGCAGAGGCCTTTGCTGCACTGATTGACATGATGTATACCTCCACCCTCATGCTGGGGGAGA
GCAATGTAATGGATGTCTTATTGGCAGCCTCTCACCTGCATTTGAACTCTGTTGTTAAGGCATGTAAACA
TTACTTAACGACAAGGACGCTGCCCATGTCTCCCCCCAGTGAGCGCGTTCAGGAGCAGAGCGCCCGCATG
CAGCGCTCCTTTATGCTACAGCAGCTGGGACTAAGCATCGTGAGCTCAGCCCTCAATTCCAGCCAGAATG
GCGAGGAGCAGCCAGCCCCCATGAGCTCTTCCATGCGCAGTAACCTGGATCAGCGCACGCCCTTCCCCAT
GAGACGCCTTCATAAGCGCAAGCAGTCTGCAGAGGAGCGGGCCAGGCAGCGCCTCCGACCCTCCATAGAT
GAGTCTGCCATTTCAGATGTTACACCGGAGAATGGGCCTTCAGGGGTTCATTCTCGGGAGGAGTTCTTTT
CACCAGATTCTCTGAAAATTGTGGATAATCCTAAAGCTGATGGAATGACTGATAACCAGGAAGATAGTGC
GATCATGTTTGATCAGTCTTTTGGCACTCAAGAAGATGCCCAGGTGCCCAGCCAGTCTGATAACAGTGCT
GGCAACATGGCACAGTTGTCCATGGCCTCTCGTGCAACTCAGGTTGAGACTAGTTTTGATCAGGAAGCTG
CACCTGAGAAAAGTAGTTTTCAGTGTGAAAACCCTGAGGTTGGCCTTGGTGAGAAGGAGCACATGAGAGT
GGTGGTTAAATCTGAGCCCCTGAGCTCACCTGAGCCTCAGGATGAAGTGAGCGATGTGACCTCACAAGCA
GAAGGCAGCGAGTCTGTGGAAGTGGAAGGAGTTGTGGTCAGTGCCGAGAAGATAGACCTCAGCCCTGAAA
GCAGTGATCGGAGTTTTTCAGATCCCCAGTCTAGCACAGACAGGGTAGGTGATATCCATATTTTGGAAGT
CACAAATAACCTAGAGCATAAGTCCACTTTTAGTATTTCGAATTTTCTTAACAAGAGCAGAGGAAATAAC
TTTACTGCAAATCAGAACAATGATGATAATATTCCAAACACCACTAGTGACTGCAGGCTGGAGAGTGAGG
CCCCCTATTTGTTGAGTCCAGAGGCTGGGCCTGCAGGTGGGCCCTCCTCTGCCCCTGGCTCCCATGTAGA
GAACCCATTTAGTGAACCTGCAGACTCCCACTTCGTCAGGCCTATGCAGGAGGTGATGGGCCTGCCGTGT
GTGCAGACTTCAGGCTACCAAGGAGGAGAACAGTTTGGGATGGACTTTTCCAGGTCTGGTTTGGGCCTCC
ACTCCTCCTTCTCCAGGGTAATGATAGGTTCCCCAAGGGGAGGAGCCAGTAACTTTCCTTACTACCGCCG
CATAGCTCCCAAAATGCCAGTTGTAACTTCCGTCAGGAGCTCACAGATCCCAGAAAACTCTACCAGTTCT
CAGCTAATGATGAATGGAGCTACGTCCTCATTTGAAAATGGCCATCCTTCCCAGCCTGGCCCTCCACAGT
TGACCAGGGCATCTGCAGATGTTCTGTCAAAGTGCAAGAAGGCCTTATCAGAGCACAATGTTTTGGTTGT
AGAGGGAGCTCGCAAGTATGCCTGCAAAATCTGCTGCAAAACTTTTCTGACTTTGACAGATTGCAAGAAG
CACATCCGTGTTCACACAGGTGAAAAGCCTTACGCCTGCCTGAAGTGTGGCAAGAGGTTTAGTCAGTCCA
GCCACCTGTATAAGCACTCAAAGACTACCTGCCTGCGCTGGCAGAGCAGCAATCTTCCCAGCACTTTGCT
CTAG

Translation (677 aa):
MDFPGHFEQIFQQLNYQRLHGQLCDCVIVVGNRHFKAHRSVLAACSTHFRALFSVAEGDQTMNMIQLDSE
VVTAEAFAALIDMMYTSTLMLGESNVMDVLLAASHLHLNSVVKACKHYLTTRTLPMSPPSERVQEQSARM
QRSFMLQQLGLSIVSSALNSSQNGEEQPAPMSSSMRSNLDQRTPFPMRRLHKRKQSAEERARQRLRPSID
ESAISDVTPENGPSGVHSREEFFSPDSLKIVDNPKADGMTDNQEDSAIMFDQSFGTQEDAQVPSQSDNSA
GNMAQLSMASRATQVETSFDQEAAPEKSSFQCENPEVGLGEKEHMRVVVKSEPLSSPEPQDEVSDVTSQA
EGSESVEVEGVVVSAEKIDLSPESSDRSFSDPQSSTDRVGDIHILEVTNNLEHKSTFSISNFLNKSRGNN
FTANQNNDDNIPNTTSDCRLESEAPYLLSPEAGPAGGPSSAPGSHVENPFSEPADSHFVRPMQEVMGLPC
VQTSGYQGGEQFGMDFSRSGLGLHSSFSRVMIGSPRGGASNFPYYRRIAPKMPVVTSVRSSQIPENSTSS
QLMMNGATSSFENGHPSQPGPPQLTRASADVLSKCKKALSEHNVLVVEGARKYACKICCKTFLTLTDCKK
HIRVHTGEKPYACLKCGKRFSQSSHLYKHSKTTCLRWQSSNLPSTLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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