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Report for CCDS8363.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8363.1 Public Homo sapiens 11 ZW10 24 110 108 CCDS HistoryNCBI Gene:9183Re-query CCDS DB by CCDS ID:8363.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8363.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000200135.8 ENSP00000200135.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000200135.8Link to Ensembl Protein Viewer:ENSP00000200135.3Re-query CCDS DB by Nucleotide ID:ENST00000200135Re-query CCDS DB by Protein ID:ENSP00000200135
Original member Current member NCBI NM_004724.4 NP_004715.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004724.4Link to Protein Sequence:NP_004715.1Re-query CCDS DB by Nucleotide ID:NM_004724Re-query CCDS DB by Protein ID:NP_004715Link to BLAST:NP_004715.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004715.1 779 O43264-1 779 100% 0 0

Chromosomal Locations for CCDS 8363.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 113733694 113733814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113736620 113736822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113737572 113737703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113738264 113738394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113739213 113739382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113741694 113741765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113743802 113744040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113747531 113747713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113748257 113748420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113757662 113757853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113758554 113758706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113760209 113760368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113760513 113760590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113760817 113760918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113768833 113768967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113773562 113773666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2340 nt):
ATGGCCTCGTTCGTGACAGAAGTTTTGGCACACTCCGGGAGGCTGGAAAAGGAGGATCTGGGGACCCGGA
TCAGCCGCCTGACCCGGCGGGTGGAGGAGATCAAGGGTGAGGTGTGCAATATGATTAGCAAGAAGTACAG
TGAATTCCTGCCTAGCATGCAGAGCGCGCAGGGCCTGATTACCCAGGTGGATAAGCTATCTGAAGACATT
GACCTGCTGAAATCCAGGATAGAGAGTGAGGTCCGCCGGGATCTTCACGTATCAACCGGTGAATTTACAG
ACTTAAAGCAGCAGTTGGAAAGAGACTCAGTTGTCCTAAGTTTGCTTAAACAGTTGCAGGAGTTTTCCAC
TGCTATTGAAGAATATAATTGTGCATTAACAGAGAAGAAGTATGTCACTGGTGCTCAGCGTCTGGAAGAG
GCACAGAAATGCTTGAAGTTATTAAAATCCAGAAAATGCTTTGATTTAAAAATATTGAAATCTCTCAGCA
TGGAGCTCACAATACAGAAACAGAACATACTTTATCACCTTGGAGAAGAGTGGCAGAAGCTGATTGTATG
GAAGTTCCCACCATCAAAAGATACCAGCAGTTTGGAATCTTACCTACAAACTGAACTTCATTTATACACT
GAACAATCGCACAAAGAGGAGAAGACCCCTATGCCACCCATCAGTTCTGTCCTCTTGGCATTTTCTGTTC
TTGGAGAACTACACAGCAAGCTTAAATCATTTGGTCAGATGCTGCTGAAGTATATCCTTAGGCCGCTGGC
ATCTTGCCCATCCCTTCATGCTGTGATAGAAAGCCAGCCTAACATAGTTATTATTCGTTTTGAATCTATA
ATGACTAACTTGGAATATCCATCACCATCTGAAGTTTTTACAAAGATCAGACTGGTACTAGAAGTGCTCC
AGAAACAGCTTCTAGATTTGCCACTTGACACTGACCTGGAAAATGAAAAAACATCTACTGTCCCATTGGC
TGAGATGCTTGGAGACATGATCTGGGAGGACTTGTCTGAGTGCCTCATCAAAAACTGTTTGGTTTATTCG
ATTCCAACAAATAGCAGCAAATTACAGCAATATGAAGAGATCATACAGTCCACTGAAGAATTTGAAAATG
CCCTAAAGGAAATGAGATTTTTAAAAGGAGATACTACAGATTTGCTGAAATACGCTCGTAACATCAATTC
TCATTTTGCAAACAAAAAGTGCCAGGATGTGATTGTGGCAGCCAGAAATCTAATGACCTCAGAAATTCAT
AACACTGTGAAGATTATTCCTGATTCTAAGATAAATGTGCCAGAGTTACCCACTCCTGATGAGGATAACA
AACTGGAAGTACAGAAAGTATCCAATACTCAGTACCACGAAGTGATGAATTTAGAGCCTGAAAATACATT
GGACCAACATTCCTTTTCCTTGCCCACATGCCGTATCAGTGAGTCTGTGAAGAAATTAATGGAACTCGCC
TATCAGACTTTACTAGAGGCAACAACCAGTAGTGATCAATGTGCTGTTCAACTTTTCTACTCAGTGAGGA
ATATCTTCCATTTGTTCCATGATGTTGTACCAACATATCACAAGGAGAACCTTCAAAAACTTCCCCAGTT
GGCTGCTATTCATCACAACAACTGTATGTACATTGCTCACCACTTGCTGACCCTCGGGCATCAGTTCAGA
TTGCGTCTTGCCCCCATTCTTTGTGATGGCACTGCTACTTTTGTGGATCTTGTACCTGGCTTCAGGAGAC
TTGGGACAGAATGCTTTTTGGCCCAAATGCGGGCACAGAAAGGTGAACTTCTGGAAAGATTATCAAGTGC
TAGGAACTTTTCAAATATGGACGATGAAGAGAATTATTCTGCAGCAAGTAAAGCAGTCCGGCAGGTACTG
CACCAACTAAAGAGACTTGGAATTGTGTGGCAGGATGTCCTGCCAGTGAATATATATTGCAAGGCTATGG
GGACTTTACTCAATACAGCAATTTCTGAGGTCATTGGCAAAATTACTGCCCTAGAGGACATATCTACTGA
AGATGGTGATAGGTTATATTCCTTATGCAAAACAGTGATGGATGAAGGACCCCAAGTATTTGCACCTTTA
TCTGAAGAAAGCAAGAACAAGAAATATCAAGAAGAGGTTCCAGTCTATGTGCCAAAATGGATGCCATTCA
AGGAATTGATGATGATGCTACAAGCCAGCTTGCAAGAAATTGGGGATCGGTGGGCAGATGGAAAAGGACC
CCTGGCAGCTGCGTTCTCTTCCAGTGAAGTAAAAGCTTTAATTCGTGCCTTGTTTCAGAACACAGAAAGA
AGAGCAGCTGCCCTTGCTAAAATTAAATAG

Translation (779 aa):
MASFVTEVLAHSGRLEKEDLGTRISRLTRRVEEIKGEVCNMISKKYSEFLPSMQSAQGLITQVDKLSEDI
DLLKSRIESEVRRDLHVSTGEFTDLKQQLERDSVVLSLLKQLQEFSTAIEEYNCALTEKKYVTGAQRLEE
AQKCLKLLKSRKCFDLKILKSLSMELTIQKQNILYHLGEEWQKLIVWKFPPSKDTSSLESYLQTELHLYT
EQSHKEEKTPMPPISSVLLAFSVLGELHSKLKSFGQMLLKYILRPLASCPSLHAVIESQPNIVIIRFESI
MTNLEYPSPSEVFTKIRLVLEVLQKQLLDLPLDTDLENEKTSTVPLAEMLGDMIWEDLSECLIKNCLVYS
IPTNSSKLQQYEEIIQSTEEFENALKEMRFLKGDTTDLLKYARNINSHFANKKCQDVIVAARNLMTSEIH
NTVKIIPDSKINVPELPTPDEDNKLEVQKVSNTQYHEVMNLEPENTLDQHSFSLPTCRISESVKKLMELA
YQTLLEATTSSDQCAVQLFYSVRNIFHLFHDVVPTYHKENLQKLPQLAAIHHNNCMYIAHHLLTLGHQFR
LRLAPILCDGTATFVDLVPGFRRLGTECFLAQMRAQKGELLERLSSARNFSNMDDEENYSAASKAVRQVL
HQLKRLGIVWQDVLPVNIYCKAMGTLLNTAISEVIGKITALEDISTEDGDRLYSLCKTVMDEGPQVFAPL
SEESKNKKYQEEVPVYVPKWMPFKELMMMLQASLQEIGDRWADGKGPLAAAFSSSEVKALIRALFQNTER
RAAALAKIK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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